Scomber japonicus (chub mackerel): 128379449
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Entry
128379449 CDS
T09718
Symbol
abca3b
Name
(RefSeq) phospholipid-transporting ATPase ABCA3
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
128379449 (abca3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sjo02000
]
128379449 (abca3b)
Transporters [BR:
sjo02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
128379449 (abca3b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
ACT_13
AAA_23
AAA_22
AAA_15
SRP54
AAA_29
RsgA_GTPase
AAA_30
Motif
Other DBs
NCBI-GeneID:
128379449
NCBI-ProteinID:
XP_053195041
LinkDB
All DBs
Position
18:16851676..16878020
Genome browser
AA seq
1708 aa
AA seq
DB search
MAIMRQFGLLVWKNYLQQKRQILVTLVEIVLPLLFSGILIVLRQKVPFKDYPNATVYESF
SVDHLPRNYLKELQLAYVPGNSSVVRQVAEDVRGRLFLRSVRGFETEEQFEDYVRNDPLS
GMLLAAVVFEHPFKHDDEPLPLKVNYHLRFTFTPRNAPPKERSELNPNSDLDWHTLSLFP
LFQLPGPREQYDKDGGTPGYFREGFLAVQQAVDRAIMRSYNRTAADSLLGQTRVVLSRFP
YPAFIYDVFILAIQNQLPLLLVLSFTYTSLSIVRAVVQEKERKLKEYMRMMGLSNWLHWS
AWFLMFFLFLSISVFFVTLLLCIQVSPNGAVLSYSDPTLVFVFLLVFTVATINFSFMISA
FFSRANVAAAAGGFLYFLSYLPYLFLWPRYDLLSHAQKVSACLISNVAMAMGSQLIGMFE
GKGTGIQWSNMFDSVTVDDDFSMAQVLGLLLFDSILYGLIAWYMEAVFPGEYGVPLPSYF
FILPSYWCSSPRMALVNEKEEEEDAEKALKGEFIEAEPAGLVSGIKIKHLAKEFKMGNKT
RQAVRDLTLNMFEGQVTVLLGHNGAGKTTTLSMLTGLFPPTSGRAYINGYDICQDMALIR
RSLGLCPQHDVLFDNLTVREHLLFYAQLKGYSKDKIPDEVDRIIRLLNLEDKRQARSKTL
SGGMKRKLSIGIALIGDSKVVMLDEPTSGMDPSARRATWDLLQGEKRGRTILLTTHFMDE
ADLLGDRIAIMAGGELQCCGSPLFLKNKYGAGYHMVIVKDALCNVSEITRLVHMYVPNAT
LESSAGAELSYILPKESTSRFELLFAELEMNRDELGIASYGASVTTMEEVFLRVGKLVDS
SLDIQAIQLPALQYQHERRSHDWTTDDASSISGMTDVTDFTDSGTLISEDCSNIKLNTGV
RLHMQQFYAMFLKRALYSWRNWKVMVAQFLVPLVFTVVALIVARTFPNHQNAPQLKLALS
RYGPTRVPVAVQPGAGPLASALAKKYSSQLSAQLGQLINITDFTDYILTQAEEEGGSFNE
HCVLGAAFLGSSRHFAEATAYFNNEGYHTPATALMMVDNALFKLLAGPNASIQTGNYPMP
RNLSESARSQLTESKTGFAIAINLMYGMASLSSTFALLLVTESSIKSKHVQQVSGVYLSN
FWFSALLWDLVNFLLPCLLMLVVFQAFGVKAFIADNHLVDVLLMLLLYGWAVVPLMYLLS
FFFSTAASAYTRLTIFNMISGTATFLAVVIMTIPELNLQNMSHLLDKVFLIFPNYCLGMS
FSQFYQNYEYISFCTSNPLAEKICNYLNITYQKNYFSMSEPGVGRFLVAFSVQGVVYIIL
LFVIELQCIRTLQRLLTSLCRGPKQLPLIEDAALLPEDRDVAEERKRVLECQPMVESMVG
SPLILQELSKVYSSGENLLAVDRLSLAVGKGECFGLLGFNGAGKTTTFKMLTGDESVTSG
DAYIDGYSILRDIKKVQQRIGYCPQFDAVLDHMTGRETLSMYARLRGIPEKYVSGCVENV
LRSLLLEPHADKLVRSYSGGNKRKLSAGMALIGGPPVIFLDEPSTGMDPVARRLLWDAVT
RTRESGKAIIITSHSMEECEALCTRLAVMVNGQFKCLGSPQHLKSKFGSGYTLLAKVHIE
TELEDSDLQLFKDFIESTFPGSQLKDEHQGMVHYHLTDKTLTWAQVFGTLESAKEKYCIE
DYCVSQISLEQVFLSFAQFQHCTESRRK
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atggctatcatgcgacaatttggactactggtgtggaaaaactaccttcagcagaaacgt
caaatcctggtcactctggtggagattgtcctgccactgcttttctctggcatcctcatc
gtgctgcggcagaaggtgccttttaaagattacccaaatgcaacggtctacgaaagcttc
tccgtcgaccatctaccgagaaactacttgaaagagttgcagctggcctatgtgcctgga
aactccagcgtggtgcgtcaggtggcagaagatgtgcgaggcagactgttcctccgctca
gttcgtggctttgagacagaggagcagtttgaggactatgtgagaaatgaccctctgtca
ggaatgctgttggctgctgtggtgtttgagcaccccttcaaacatgatgatgaacctcta
ccccttaaggtgaactaccatctgcgttttaccttcaccccgcgcaatgcccctcccaag
gagaggtcggagctgaaccccaacagcgacctggactggcacacgctcagcctctttccc
ctttttcagctgccagggccgagggagcagtacgacaaggatgggggcacgcctggttat
ttccgagagggcttcctggcggtgcagcaagcagtggaccgagccatcatgcgctcttac
aacagaactgctgctgactctctgctggggcagaccagagtggtcctgtctcggtttcct
taccctgcctttatatacgacgtctttatcctggccatacagaaccaactgcccttactg
ctggtgctcagcttcacctatacatccctcagcattgtccgagctgtggtgcaggagaag
gaaaggaagctcaaggagtacatgaggatgatgggtctcagcaactggctccactggagt
gcctggttcctcatgttcttcctcttcctctccatttcagtcttttttgtcactctgctc
ctctgtattcaggtgagccctaatggagcagtgctgagctacagtgaccccaccctggtc
tttgtcttcctgcttgtcttcaccgtggccacaatcaacttcagcttcatgattagtgcc
ttcttttcacgagccaatgtggcggcagcagcgggtggtttcttgtatttcctgagctac
ctgccttatttgttcctgtggcctcgctacgacttactcagccatgctcagaaggtgtca
gcctgccttatctccaacgtggccatggccatgggatctcagcttataggaatgtttgaa
ggcaaaggtacaggaattcagtggtctaacatgtttgattctgtgacggtggatgatgac
ttctccatggcccaggtgctgggcttgctgctgtttgactctatactgtacgggctgatt
gcctggtacatggaggcagtttttcctggagagtatggagtgcctctaccatcctacttc
ttcatactgccttcatattggtgcagcagccctcgcatggctttggtgaatgagaaggag
gaagaggaggatgcagaaaaggctctgaaaggagagtttatagaggcggaaccagctgga
ctagtctctgggatcaaaattaaacatctcgctaaggaattcaaaatgggcaacaagaca
cgtcaggctgtgcgggatcttacgctgaacatgttcgagggacaggtcacggtcctgcta
ggacacaacggtgctgggaagaccaccacactgtccatgctgacaggtctgtttcccccc
accagtggcagagcctatatcaacggctacgatatctgtcaggacatggctctgatccga
cgcagtctggggctctgtccccagcatgacgtgctgtttgataaccttactgtgagagaa
cacttgctcttctatgcacagctgaaaggctactccaaagacaagattccagatgaggtg
gacagaataatccgtctcctgaaccttgaggacaagcgacaggctcgctccaaaaccctc
tctggtggcatgaagagaaaactctctattggcattgccctcattggagattccaaggtg
gtgatgttagatgaacccacatcgggtatggacccatcagcacgacgtgccacctgggac
cttttgcaaggggagaagcgcggtcgcaccatcctgctcaccacgcactttatggacgag
gctgacctgcttggtgaccgcatcgccattatggcaggaggggaactgcagtgctgcggg
tcaccacttttccttaagaacaaatatggtgctggctaccacatggtgatagtaaaggat
gccctttgtaacgtgtccgagatcacccgccttgttcacatgtacgttcctaatgccaca
ctggaaagcagcgccggggctgagctctcttacatcttgcccaaagaaagtactagcagg
tttgagcttctgtttgctgagctggagatgaacagagatgaattagggattgccagctat
ggagcttcagtaaccactatggaagaggttttcctcagagtgggaaaactggtggattct
agtttggacatccaggctatccagctgcctgcccttcaataccaacatgaaagacgttct
catgattggaccacagacgatgccagcagcatcagtggcatgaccgatgtcactgacttc
acagatagtggcacactcatctcagaggattgctccaacatcaaactgaacactggggtc
agactacatatgcaacagttttacgctatgttcctgaagagggcgctgtacagctggaga
aactggaaggtgatggtggctcagttcctggttcctttggtcttcactgtcgtggcctta
attgtggcacgcacctttcccaatcaccagaatgctcctcaactgaagctggcactcagt
cgttatggtcccaccagggtccctgtggctgtgcagcctggggcgggtcccttggcatcc
gccttggcaaaaaaatacagttcccagctctctgcccagctaggccagctcattaacatt
acggactttactgactacatcctgacccaggcagaggaggaaggtggcagctttaatgaa
cactgtgtattgggcgctgctttccttggcagcagcagacactttgccgaagccacagcc
tacttcaacaacgagggttaccatacacctgccacagccctcatgatggtggacaacgct
ctgttcaaacttcttgcagggccaaacgcctccatccagacaggcaattaccccatgcca
cgcaatctgtctgagagtgcccggagccagctcacagagagcaagacaggctttgccatc
gccataaacttgatgtatggtatggcctccctgtctagcaccttcgccctactgcttgtt
acagagtcatctattaagtccaagcatgtgcagcaggtcagcggcgtctacctgtcaaac
ttctggttttctgccctgctgtgggatctggtcaacttccttctgccctgtctcctcatg
ctggtggtattccaggctttcggagtcaaagcttttatagctgacaaccacctggtagat
gtgttgttgatgctgctgctgtatggctgggctgttgtgcctctcatgtacctgctcagc
ttctttttctccaccgccgcctctgcttacacccgcctcaccatcttcaacatgatctct
ggcacggccacctttctggctgtcgtcatcatgaccatcccagagttgaacctgcagaat
atgtcacatttactggataaggtgttcctgatcttcccgaactattgcctcggcatgtcc
ttcagccagttttatcagaattacgaatacatctcgttttgcacctcgaaccctttggcc
gagaaaatctgcaattatttaaacatcacataccaaaaaaattacttttcgatgtcggag
cctggtgtgggacgcttcctcgtggccttctcagtgcagggtgtagtctatattattctg
ctgtttgtcatcgagctgcagtgcatccgcactctccagcgactcctcacctctctgtgc
agaggacctaaacagttacctctaatagaggatgcagcgctgcttccagaggacagagat
gtggcagaagagaggaagagggttctggagtgccagccgatggtggagtccatggttggc
agccccctcattctgcaagagctcagcaaggtatacagcagtggggagaatcttttggcc
gtggacaggctgtctctcgctgtggggaaaggagagtgttttggcctcctgggcttcaat
ggagcagggaagaccactacctttaagatgctgacaggcgatgagagtgtgacctccggg
gacgcctacatcgatggatacagtatcttaagggacattaagaaggtgcagcagcgtatt
ggctactgtcctcagtttgacgctgtgttggaccacatgacaggaagagaaactctgagt
atgtatgccaggctcagaggaataccagagaagtatgtgtccggctgcgtggagaatgtc
ctgaggtcactgctgttggagcctcatgctgataaactggtccgcagctacagtggcggt
aacaagaggaagctgagtgcaggcatggctctgattggtgggcctccagtcatcttcctg
gatgagccttcaactgggatggaccctgtggccagaagactgctgtgggatgctgttaca
cgcacgcgagagtctggcaaggccattatcattacttcccatagtatggaggagtgtgaa
gccctgtgcaccaggctggcagtgatggtcaatggtcagttcaagtgcctcgggagtccg
cagcacctgaagagcaagtttggcagtggctacaccctgctggctaaagttcatatagaa
actgagttggaggacagcgacctgcagctttttaaagactttattgaaagcacctttcca
ggaagtcaactaaaggacgaacaccagggaatggtgcactatcatttgactgacaaaaca
cttacctgggcccaggtgtttggcactttagagtcagccaaagagaaatactgcattgaa
gactactgtgtgagccagatatcactggagcaggtgttcctcagctttgcccagttccag
cactgcacagagagcaggaggaagtaa
DBGET
integrated database retrieval system
