Scomber japonicus (chub mackerel): 128379462
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Entry
128379462 CDS
T09718
Name
(RefSeq) far upstream element-binding protein 2-like isoform X1
KO
K13210
far upstream element-binding protein
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sjo03019
]
128379462
03041 Spliceosome [BR:
sjo03041
]
128379462
Messenger RNA biogenesis [BR:
sjo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
128379462
Spliceosome [BR:
sjo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
128379462
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
FUBP_C
KH_PNO1_2nd
KH_Vigilin
KH_NusA_2nd
Motif
Other DBs
NCBI-GeneID:
128379462
NCBI-ProteinID:
XP_053195059
LinkDB
All DBs
Position
18:complement(14528719..14536667)
Genome browser
AA seq
669 aa
AA seq
DB search
MSEYNAVPPPSSGAPLGGQAALGNGAGGVKKDAFADAVQRARQIAAKIGGDAGPPMNNNN
ASDGFQFTAQKRQLEDADEPESKKLAAQSDMDSATALSIGAQLAALAHQRPTSSTEEYSV
PDSMVGLIIGRGGEQINKIQQESGCKVQIAPDSGGLPDRSVSLTGSPDSIEKAKMLLDEI
VSRGRGTPPSSYHESTNGQNGAVHEMMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQD
ASQGPNVDKPLRIIGDPYKVQKAQEMVQEILRERDHGGYTERNDYGSRMGGGMDIAVPRH
SVGVVIGRNGEMIKKIQNDAGVRIQFKQDDGTGPDKIAHISGPPDRCEHAAQIINDLLQS
IRVREEGQGGPPGPPGIPAGNRGRGGGQGGWGPPGGEMTFSIPAHKCGLVIGRGGENVKS
INQQTGAFVEISRQPPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIEGPLCPVGPGPGGP
GPAGPMGPYNPNPYNPGPPGAPGPPHGGPPGPHQYTPQGWSNTYQQWQPQTPHDPSKAAA
NDPNAAWAAYYAQYYQQPSGAVPAQYPANPGGGAQTSGDQTQAAQTPGGQPDYTKAWEEY
YKKMAQAGGSAPGTAAAAPGAAGGAAATSGGQPDYSAAWAEYYRHQAAYYGQTGQASGQP
ATPQQGQAQ
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagtataacgcggtacctccacccagctccggggcccctctcggcggacaggca
gctctcggtaacggagcaggaggcgtcaagaaagacgcgtttgcggacgcagtgcagcgg
gcccggcagattgcagccaagattgggggagatgccggtcctcccatgaacaataacaac
gcttcagatggctttcagttcactgcacagaaacgacagctggaggatgcagatgaaccg
gagagcaagaagctggctgcacagagtgacatggattcagccacagcattgtctattggc
gcacagctagctgctcttgcacatcaaaggcccacctcttccacagaagagtacagtgtt
ccagacagcatggtgggactcattattggccgtggaggtgaacagatcaataagattcag
caggagtcaggttgcaaggtgcagatagctccagacagcggaggtcttccagataggagc
gtctctctcacaggttcacctgattccatagagaaagccaagatgcttttggatgaaata
gtttcacgagggaggggtacacccccgtcttcttatcatgagtccaccaacgggcagaat
ggcgcagttcatgagatgatgatcccagctggcaaggctggacttgtcattggcaaggga
ggagagaccatcaaacagctacaggagcgagcaggggtgaagatgatcctgatccaggat
gcctctcagggacccaacgttgacaagcccctgcgcattattggagatccatacaaagtc
cagaaagcccaagaaatggtgcaggagattttgagggagagagaccatgggggttatact
gaaagaaatgactacggctctcgaatgggaggaggcatggatatcgcagtaccacgacac
tctgttggtgtggtcatcgggcgcaacggagagatgatcaagaaaatccagaatgatgcc
ggagttcggatacagttcaaacaagatgacgggactggtccagataagattgcccacatc
agcggaccccctgaccgctgcgaacatgcagcccagatcataaacgacctgctgcagagc
attagggtcagggaggagggacaggggggccccccaggtcctccaggcatacctgcgggc
aacaggggtcgaggtgggggacaaggtgggtgggggccccctggaggggaaatgacattc
tctattcctgcccacaagtgtgggctcgtgattggtcgaggaggagagaacgtcaagtcc
atcaaccaacagacgggagcctttgtggaaatctcacggcagcccccccccaacggagac
cctaacttcaagctgtttatcattcggggctcaccgcagcagatcgaccacgccaagcag
ctgattgaagagaagattgagggtcctctgtgtcctgtgggcccaggtcctggtgggcca
ggtcctgctggtccaatgggtccctacaacccaaacccatacaaccctgggccgcccggg
gcccctgggccaccacatggtggtcctccaggtcctcaccagtacactcctcagggttgg
agcaacacctaccagcagtggcagccgcagacaccccacgaccccagcaaggcagcagcc
aatgaccccaacgcagcgtgggcggcctactacgctcagtactaccagcagccgtcgggg
gctgtgccagcccagtaccctgcaaacccaggtggaggtgcccaaacttcaggcgaccag
acccaggccgcacagacgccggggggacagccagactacaccaaggcctgggaggagtac
tacaagaagatggctcaggcaggcggctctgctccggggacagcagctgcagctccagga
gcagcagggggagctgcagccacatcaggaggccaaccggactacagcgcagcgtgggca
gagtactacaggcaccaggctgcgtactacggacagacaggacaggcctctggtcagcca
gccactccccagcaaggacaggcacagtga
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