Scomber japonicus (chub mackerel): 128379463
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Entry
128379463 CDS
T09718
Symbol
rhot1a
Name
(RefSeq) mitochondrial Rho GTPase 1-A isoform X1
KO
K07870
mitochondrial Rho GTPase 1 [EC:3.6.5.-]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
128379463 (rhot1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
sjo03029
]
128379463 (rhot1a)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
sjo04031
]
128379463 (rhot1a)
Mitochondrial biogenesis [BR:
sjo03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
128379463 (rhot1a)
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
128379463 (rhot1a)
GTP-binding proteins [BR:
sjo04031
]
Small (monomeric) G-proteins
Rho Family
Miro
128379463 (rhot1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF_assoc_2
EF_assoc_1
Ras
Roc
SRPRB
EF-hand_6
EF-hand_7
EF-hand_1
Arf
MMR_HSR1
RsgA_GTPase
AAA_14
EF-hand_8
AAA_22
AAA
AAA_25
AAA_5
Motif
Other DBs
NCBI-GeneID:
128379463
NCBI-ProteinID:
XP_053195061
LinkDB
All DBs
Position
18:14557359..14572251
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AA seq
623 aa
AA seq
DB search
MRKDVRILLVGEPKVGKTSLIMSLVSEEFPDEVPLRAEEITIPADVTPERVPTHIVDYSE
AEQSDEQLYQEISKANVICIVYSVNNKKSIEKVTSHWIPLINDRTDKDSRVPLILVGNKS
DLVEHSSMETILPIMNQYQDIETCVECSAKNLKNISELFYYAQKAVLHPTGPLYCPEEKE
LKPSCIKALTRIFKVSDLDNDGILNDNELNFFQRTCFNTPLAPQALEDVKNVVRRNMTDG
VKDNGLTLKGFLFLHTLFIQRGRHETTWTVLRRFGYDDDLELTQEYLFPMIKIPPDCTTE
LNHNAYLFLQSVFDKHDKDRDCALSPEEVRDLFKVFPYMPWGPDVNNTVCTNEQGWITYQ
GYLSQWTLTTYLDVQRSLEYLGYLGYSIIYEQESQAAAITVTRNKRIDLQKKQTQRSVFR
CNVLGARGSGKSGFLQTFLGKNLQVSGIQQRRIREDHKSLYAISTTYVYGQEKYLLLHEV
MPDFDFLSEADLACDVVCLVYDINNPRSFEYCAKVYKQYFIDSKTPCVVIAAKSDLHEVR
QHYSLSPHEFCRKHKLHPPQPFTCNIANAPNKDIYTRLTTMAMYPHMAQADLKNSTFWLR
ASVGATVFAVLGFAMYRALLKQR
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaggacgtgaggatactactcgtaggcgagcccaaggtggggaagacgtcactg
attatgtctctggtcagcgaggagtttcctgatgaagttcctcttcgagctgaggagatc
accatcccagccgatgtcaccccagagagggttcccacacacattgtggactactcagag
gcagaacagtcagacgagcagctctatcaagaaatatctaaggcaaatgttatctgcata
gtttactcagtgaacaacaagaagtccattgaaaaggtgacaagccactggattcccctc
attaatgacagaacggacaaggatagcagggtaccattgatccttgtggggaacaagtct
gacctggtggaacacagcagcatggagaccatcctgccaatcatgaaccaataccaagat
attgagacttgtgtagagtgctctgccaaaaacctgaagaacatctctgagctgttctac
tatgcccagaaggctgtcctccacccgacaggacccctgtactgcccagaggagaaggag
ctgaagccatcttgcattaaggctctaactagaatctttaaagtgtctgacttggacaat
gatggtatccttaatgacaatgagctcaacttcttccagagaacatgtttcaatacacca
ctggcacctcaagctttagaagatgtaaaaaatgtggtcaggaggaacatgacagatgga
gtcaaagacaacggacttacactcaaaggcttcctgttcctgcacaccctctttatacag
cgaggtcgacacgagaccacctggacggtactgaggaggttcggttatgatgacgacctg
gagctcacacaggaatacctgttccccatgataaagatcccaccagactgcaccacagag
cttaaccacaacgcttacctctttcttcagagtgtctttgacaagcatgacaaagacaga
gattgtgcgctgtcgccagaggaggtgagggacttgttcaaagtgtttccctacatgcct
tggggcccggatgtcaacaacacggtctgtacgaacgaacaaggatggatcacataccag
ggatacctctcacagtggacgttaacaacatatctagatgttcagcgtagtttggagtac
ttaggttaccttggctactccatcatctatgaacaggagtcccaagcagctgccattaca
gtgacccgtaacaagcgcatagatctgcagaaaaaacagacccagcgtagcgtcttccgc
tgcaacgtcttgggggcgcggggaagcgggaagagcggcttccttcagactttcctgggc
aagaacctgcaggtcagtggaatacaacagaggcggattagagaagaccacaagtccctc
tatgctatcagcacgacctatgtttatggtcaggagaagtacctgctgctccacgaggtg
atgccagattttgacttcctgtcagaggcggacctggcctgtgacgtggtctgcctggtg
tacgatatcaacaatccacgctcttttgaatactgcgccaaagtgtacaagcaatacttc
atcgacagcaagacgccatgtgtggtgatagctgccaagtcggacctgcacgaagtacgg
cagcactatagcctctcaccacatgagttctgccgtaaacacaaactccacccgccccaa
cccttcacgtgcaacatagccaacgcacccaacaaggacatctacactagactcaccacc
atggccatgtatccgcacatggctcaggcggacctgaagaactcaaccttctggctgaga
gcgagtgtcggtgccacagtgtttgctgtgctgggctttgccatgtacagagcacttctc
aaacagcggtga
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