Scomber japonicus (chub mackerel): 128379464
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Entry
128379464 CDS
T09718
Symbol
vps54
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 54
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sjo01009
]
128379464 (vps54)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128379464 (vps54)
Protein phosphatases and associated proteins [BR:
sjo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128379464 (vps54)
Membrane trafficking [BR:
sjo04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
128379464 (vps54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
SBP_bac_6
Motif
Other DBs
NCBI-GeneID:
128379464
NCBI-ProteinID:
XP_053195068
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All DBs
Position
2:4030201..4061650
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AA seq
917 aa
AA seq
DB search
MTVSVPGVSAAVYAAVFLPVPPLFFCDGEEEKQRRLRFTRQLASWEAPPDVMASSHSSSP
VPRPGGRGRAGIYHKERDASPNRCRPVRSLPDVCPKEPTGEGRALCDGPSVVAEHDRWTV
FSSKVNLPAALNDPRLAKRESDFFTKTWGLDFAETEVMPSFYLPNITREHFGPYLQETAQ
RERIHERCKTICPNKDDVDAVSSITSNHDKSRAELEQVPKIFMKPEFALEDPATFNAVLP
WSHFNSAGGKSSRDVASSKLLQEKQEDSQSFTLNYIGNKMKHLGSQLCELEKLIDKMMVE
DFSMYARSDLNRSLKEEPQVLEKVHNAVSLKERLASLVFGLLRQRKLDFLDIYSDEMIMA
AKLIVSQCVAENVLHIEDIDTEVVTKLADQMRLMTFPQWFELLTSVFESFLLFLQRIKAT
LNVIKNVVLEIQDSNQKLRLLEESGSEPAGQESCQSPQLLQGEAELAYLTHEGLFISDAL
SEAHQQQQQQQQQDPSSVTGSRTQQSRAEPESNSREQNFMSAENMMPSDQELNRVLNNIQ
ELLFTASDVSHDRCVKVLTARAKDGSLERLSSAEFVCLSQAVDGFIRDTEELCGRRSVSL
RGALQSQANRFVHRFHEERKTKLSLLLDNERWKQAEVPAEFQDLVNSIADGRITLPERKT
TGPDDRKPAEFLLVNGQKYAVVGTVLLLIRIFLEYCQCVSDIPAIATDMLTRLSDLLKHF
NSRSCQLVLGAGALQVVGLKTITTKNLALASRCLQLVVLYIPVIRAHFETKLQPKQFSVL
RHFDHITKDYNDHISEISAKLVAIMDSLFEKVLSKYEVKAPMPSACFRNVCKQMAKMHEA
INELLPEEQTQMLFLRINASFKMHLKRQLARLGVVNDGGPQHGLVVVDVAFYTENVQVLK
SLERLDLNMAEIWEQKR
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgacggtcagtgtaccgggtgtatctgctgccgtgtacgctgctgtcttcctcccggtt
cctccgctgtttttctgtgatggtgaagaggagaaacaacggcggctgcgcttcacacga
cagctagcctcgtgggaggctcctcccgatgtcatggcgtccagccacagctcctcccca
gtgcctcgtcccggcggtcgaggtcgagctgggatttatcacaaggagcgagacgcctcc
ccgaatcgctgccggccggttcgctcgctgcccgacgtttgtcccaaagagccgacgggt
gagggtcgagctctgtgtgacggaccctcggtggtagcggagcacgaccgatggaccgtg
ttcagctctaaggtgaatcttcccgccgcgctcaacgaccccagactcgccaaacgggag
tcggacttcttcaccaaaacatgggggctggacttcgccgagacggaggtgatgccctcc
ttctacctccccaacatcaccagggaacacttcgggccgtacctgcaggagacggctcag
agagaaagaattcatgagcgctgtaagacgatctgtcccaacaaagacgacgtggacgcc
gtctccagtatcacctccaaccacgataaatccagagctgagctggaacaagtcccgaag
atcttcatgaagcctgagtttgctctggaggacccggctacgttcaacgctgtgcttccc
tggtctcactttaacagcgccggagggaagagcagcagagacgtcgcttcatccaaactg
ctgcaggagaagcaggaagactcacagagctttactttgaattacattgggaataaaatg
aaacatcttggctctcagctgtgtgagttggagaagctgattgataagatgatggtcgag
gacttcagcatgtacgctcgcagcgatctcaaccgcagcctgaaggaagagccgcaggtc
ctggagaaggttcacaacgctgtctcactgaaggagcgtctggcctcgctggtgttcggc
ctgctgcgtcagaggaagctggactttctggatatttacagcgatgagatgatcatggcc
gccaagctgatcgtctctcagtgtgtggcagaaaatgttttgcacatagaagacatcgac
actgaagtcgtcactaagctagcggatcagatgcgtctgatgacgttccctcagtggttc
gagctgctgacgagcgtctttgagagtttccttctgttcctgcagagaatcaaagcgact
ctgaacgtgatcaagaacgtggttctggagattcaggactcgaaccagaagctgcgtctg
ctggaggagtccggttcagagcctgcaggtcaggagtcctgtcagagtccgcagctgctg
cagggggaagcggagctggcctacctcacccacgagggtctgttcatcagcgacgctctg
agcgaagcccaccagcagcagcagcagcagcagcagcaggatccgagctctgtgacggga
tccaggacccagcagagccgagcagaaccagagtctaacagcagggagcaaaacttcatg
tccgctgagaacatgatgccttctgatcaggagctgaaccgggtgctgaacaacatccag
gagctgctgttcaccgcctccgacgttagccacgaccgctgcgtcaaagtgctcacggcc
agagccaaggacggctctctggagcgtctgagctcggcggagttcgtgtgtctctctcag
gcggtggacggtttcatcagggacacggaggagctgtgcggccggcgcagcgtctccctg
aggggggcgctgcagagccaagccaaccgcttcgtacatcgcttccacgaagaacgcaaa
accaaactcagtcttctcctggataacgagcgctggaaacaggccgaggttcctgctgag
tttcaggatctggtgaactccatcgctgacggcaggataacactaccagagcgcaaaact
acaggtccagacgacaggaagccggccgagtttctgcttgttaacgggcagaaatacgcc
gtcgttgggacggttctgctgctgatccggatcttcctggaatactgtcagtgtgtgagc
gacatcccagccatcgccaccgacatgctcacgcgtctgtcggacctcctcaagcacttc
aactctcggagctgccagctggttctgggagccggagctctgcaggtcgtcggcctgaag
actatcaccaccaaaaacctcgcgttagcatcgcgctgcctgcagctggtggttctctac
attcctgtcatcagagctcattttgagaccaaactgcagccaaaacagttcagcgtcctc
agacacttcgaccacatcaccaaggactacaacgatcacatatcagagatctcagctaaa
ctggtcgccatcatggacagtctgttcgagaaggttttatcaaagtacgaggtgaaagct
ccgatgccgtcggcctgcttcagaaacgtctgtaagcagatggcgaagatgcacgaagcc
atcaacgaacttttacctgaagagcagactcagatgttgtttctgaggatcaacgccagc
tttaaaatgcacctgaagcggcagctggctcgactcggcgtggtcaacgacggaggaccg
cagcacgggttggtggtcgtcgacgttgctttctacacggagaacgttcaggtgctgaag
agcctcgagcggctcgacctcaacatggccgaaatctgggagcagaagaggtga
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