Scomber japonicus (chub mackerel): 128379473
Help
Entry
128379473 CDS
T09718
Symbol
grin2ba
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2B
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04020
Calcium signaling pathway
sjo04080
Neuroactive ligand-receptor interaction
sjo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
128379473 (grin2ba)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128379473 (grin2ba)
04082 Neuroactive ligand signaling
128379473 (grin2ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sjo04040
]
128379473 (grin2ba)
Ion channels [BR:
sjo04040
]
Ligand-gated channels
Glutamate (ionotropic)
128379473 (grin2ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
128379473
NCBI-ProteinID:
XP_053195076
LinkDB
All DBs
Position
18:complement(9614872..9691988)
Genome browser
AA seq
1614 aa
AA seq
DB search
MALPNILRGLSIAVVLVGNFSEMALAGAREKEDFLHMAPNVEVLTMNETDPKSIIKSICD
LMTEHWLQGVVFGDDTDQEAIAQILDFISAQTHIPILGVRGGSSMIMAAKDDNSMFFQFG
PSIEQQASVMLNIMEEYDWYIFSIVTTYYPGYQDFVTKIRSTIENSFVGWELEEVLLLDM
SIDDGDSKIQNQLKKLQSPVILLYCTKEEANTIFEVSHSVGITGYGYTWIVPSLIAGDTD
VVPAEFPTGLLSVSYDEWDYGLEARVRDGVAIITMATSTMMMDRGPHTLLKSECHGAPDK
KTPISGNPNEVLRYLMNVTFEGRNLSFSEDGYQMHPKLVIILLNKERQWDRVGKWENGSL
SMKYHVWPRYELYGGAATREDDHLSIVTLEEAPFVIVEDVDPLSGTCMRNTVPCRKQIKT
LNQTKDSGIYIKRCCKGFCIDILKKIAKSVKFTYDLYLVTNGKHGKKINGTWNGMVGEVV
LKNAHMAVGSLTINEERSEVIDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWVMM
FVMLLLVSAVAVFIFEYFSPVGYNRCLADGREPHGPSFTIGKAIWLLWGLVFNNSVPVQN
PKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEYVDQVSGLSDKKFQSPNDFSPPFR
FGTVPNGSTERNIRNNYPEMHGYMTKFHQRNVNEALQSLKAGKLDAFIYDAAVLNYMAGR
DEGCKLVTIGSGYIFATTGYGIAIQKESLWKRHVDLAILQLFGDGEMEELESLWLTGICH
HEKNEVMSSQLDVDNMAGVFYMLGAAMALSLITFICEHWFYWQLRFCFMGVCSGQPGFVF
SISRGIYSCIHGVQIEEKSSSALNSPSATMNNTHSNIMRLLRTAKNMASLSGVNGSPHSA
LDFIRRESSVYDISEHRRSLAGHSDCKPPYLPEDNMFSDYISEVERTFGNIHLKDSNLYQ
DHYMHHHGSTLGLSGPPANRPHSLGSASSLEGGMFDCDSLGGGVAPIFTTQPCSALTHRN
MSKFDLLSGQTPPPSQGFKGGLPDLYGKFSFKGGASSSTFIPGHGYCGGRGDDDGNIRSD
VSDISTHTVTYGNLEGNAKKRKQYRDSLKKRPASAKSRRELDEIELGYRRKPYHISHHHY
HGHRSSSPPLFPAERKRGGGGGGGNNDGNSYLFREKESVRDFYLDQFRPKEGVPQWEHVD
LTEGPGSREGVVGTCTTLVPVDDFLKSKPKKSDSKSGGGSGLAGGDWECRNCRASGGGGG
KQMSMHGGGGGGGYGGGMSCGSSGGGGNSRPSSATCMRCEGCKKTGNLYDISEDNNHLLE
QMGGGKGGGGGGGMGAGPQSQSQAQQRRKSGGFGKPLRRQHSYDAFVDLQKEESGGMGSL
MGGLGGIGGMSNAGVGGMLPPPRSVSLKEKERYMEGTSPFAHIFERHGGSERERERDRDP
LFYGGEGRKGPGSPFGLFRGGDGLHRRSIGERDMRDRDRSLMEGGAAFSLSKSLYPDRVN
QNPFIPTFGDDQCLMHGAKQYYMKKQQQQQQQQQQQQVAKNSRSDFRGQMSTTSYLPASA
TAGVMSNVAPRFPKELSLGGMNHHGSMLGVGPPRPFNGSNGHVYEKLSSIESDV
NT seq
4845 nt
NT seq
+upstream
nt +downstream
nt
atggccctgcccaacatcctgcgcggcctcagcatcgccgtggtcctggtgggcaatttc
agcgagatggcgctggccggggcccgggagaaggaggactttcttcacatggcgcccaac
gtggaggtgctgaccatgaatgaaacggaccctaaaagcatcatcaagagcatctgcgac
ctaatgacggagcactggctgcagggtgtggtgttcggggatgacaccgaccaggaggcc
atcgcccagatcctagacttcatttctgcccagactcatatccccatcctcggagtccgc
gggggttcctccatgatcatggctgccaaggatgacaactccatgttctttcagtttggc
ccctccatcgagcagcaggcctcggtcatgctgaacatcatggaggaatacgactggtac
atcttctccatcgtaactacatactacccgggttatcaggactttgtcaccaagatccgt
agcaccatcgagaacagctttgtgggctgggaactggaggaagttttactactcgacatg
tccatagatgacggagattcaaagatccagaaccagctgaagaagctccagagccctgtc
attcttctctactgcacaaaggaggaggccaacaccatattcgaggtgtcccattctgtt
gggattactggctacggctacacgtggatagtgccctcgctgatagccggagacactgat
gtagtgcctgcagagttccccacaggtctgctctctgtgtcctatgacgagtgggactac
ggcctagaggctcgcgtccgcgacggcgtggcaattatcacgatggcaacatccaccatg
atgatggaccgcggccctcacaccctgctgaagtccgagtgccacggagctcctgacaag
aagacccccatctcaggcaaccctaacgaagtgctcaggtacctgatgaatgtgacgttc
gaggggcgtaatctgtcgttcagcgaggacggataccagatgcaccccaagctggtcatc
attctgctcaacaaggagagacagtgggacagggtgggtaaatgggagaacggttcccta
tccatgaagtaccatgtgtggcctcgctatgaactgtatgggggggcagcaaccagggag
gatgaccatctgtccattgtgacattggaggaggctccgttcgtcattgtggaagacgtg
gatccgcttagtgggacctgtatgaggaacactgtgccctgccggaaacagatcaaaaca
cttaatcaaacaaaggattcagggatctacatcaagcgttgctgtaagggtttctgtatc
gacatcctgaagaagattgccaagtcggtcaagttcacgtacgacctttacctggttact
aacggcaaacacggcaagaagatcaatggaacatggaatggcatggtgggagaggtggtg
ttgaaaaacgcccacatggccgttggctccttgaccatcaacgaggagagatcagaggtc
atcgacttttccgtccccttcattgagacgggcatcagtgtcatggtctcccgtagcaac
ggcactgtttcgccctcggccttcttagagcccttcagtgcggatgtgtgggtgatgatg
ttcgtgatgctgttgctggtgtcagcagtggctgtgtttatattcgagtacttcagccct
gtgggctacaaccgctgtctggctgacggcagagagcctcatggtccatctttcaccatt
ggtaaggccatctggctcttgtggggtctggtcttcaacaactctgtgccagtgcagaac
cccaaaggcaccaccagtaagatcatggtgtcagtgtgggccttctttgctgtcatcttt
ctggcctcctacactgccaacttggctgctttcatgatccaggaggaatacgtggaccag
gtatctggtctctcagacaaaaagttccagagtcccaacgacttctcgcctccgtttcgg
ttcggcactgtcccaaacgggagtacagaaagaaacataaggaataactatccagagatg
cacggctacatgacaaagttccatcagagaaacgtcaacgaggctctgcagagtctcaag
gctggcaaactagacgctttcatttatgatgcggccgtactgaactacatggctggcagg
gacgagggctgcaagctggtgaccattggcagcggctacatctttgccaccactgggtac
ggcatcgccatccagaaggagtctctctggaagagacatgtggacctggccatcttgcag
ctctttggagacggtgaaatggaggagctagagtccctgtggctgacaggaatctgccac
cacgagaagaatgaagtgatgtccagccagctggatgtggacaacatggcgggtgtcttc
tacatgctcggagccgccatggctctgtcactcatcaccttcatctgcgagcactggttc
tactggcagctgcgcttctgcttcatgggggtctgctccggccaacccggcttcgtcttc
tccatcagcaggggcatctacagctgtatccacggggtgcagattgaagagaaaagcagc
tcagcattgaactccccatcagccaccatgaacaacacccattccaacatcatgcgcctc
ttacgcaccgccaagaacatggcctccctgtcaggggtgaacggctcaccgcacagcgct
ctggacttcatccgccgcgaatcctccgtttatgacatctccgaacaccggcgcagcttg
gcgggccactcggactgcaagccaccgtacctgccagaagacaacatgttcagcgactac
atcagtgaggtggagaggacgtttggcaacatccacctgaaggacagtaatctgtaccag
gaccactacatgcaccatcatggctcaacactagggctcagcggaccccctgccaacagg
ccccatagtttgggcagcgctagttctctggagggcggcatgttcgactgtgacagccta
ggtggaggggtggcccctattttcaccacccagccctgctcagcactgacccacaggaac
atgagcaaatttgacctgctgtctggacagactcctcccccgagtcagggcttcaaggga
ggcctgcctgacctgtacgggaagttttctttcaagggaggtgcctcaagttccaccttc
atccctgggcacggttactgtggagggagaggagatgacgatgggaacatacgttcagat
gtctctgacatttccacacacacggtaacttacgggaacctggagggtaacgccaagaag
cgcaaacaataccgtgatagcctgaaaaagaggccggcctctgccaagtccagacgggag
ctggacgagatcgagctaggctacagaaggaaaccttaccacatcagccaccaccactac
catggccaccgctcctcctccccgccacttttccccgctgaacgcaagcgaggaggagga
ggtggaggaggaaacaatgacggtaactcctatctcttcagagaaaaggagagtgttagg
gatttttatttggaccagtttcggcccaaagagggcgtgccccagtgggaacatgtggac
ctgacagagggtcctgggagtagagaaggagtagtggggacctgcaccaccctggttcca
gtggatgactttcttaagagcaaacccaaaaagtcagattcaaagagtgggggaggatct
gggctggcagggggagactgggagtgcaggaactgtcgggccagtgggggaggaggaggc
aaacagatgtccatgcatggaggagggggtggtggcgggtatggtggtggtatgagctgc
gggtcttcgggaggcggaggaaacagccgacccagctctgcgacctgcatgcgctgcgag
ggctgtaaaaagacaggaaacctctatgatatcagcgaggacaacaaccacctcttggaa
cagatggggggagggaaaggtgggggaggaggtggaggtatgggtgcaggccctcagtct
caatctcaggcccagcagaggaggaagagcggagggttcggcaagccacttaggaggcag
cactcgtatgacgcgttcgtcgacctccagaaagaggagtcgggcgggatgggaagtttg
atggggggtctgggtggaatcggagggatgagcaacgcaggtgtaggaggaatgctgccc
ccacccaggagtgtcagcttgaaggagaaagaacgctacatggagggcaccagccccttc
gcacacatattcgagcgccatgggggctcggagagagaaagggaaagagacagggaccca
ctgttttacggaggtgagggccggaaaggacccggctcaccattcggcctgtttagaggt
ggtgatggcctgcaccgccgctccataggtgagagagacatgagagaccgggataggtct
ttgatggaaggcggggcagcattctctttatccaaatctctttaccccgaccgggtaaac
caaaacccctttatacccacctttggcgacgaccagtgtctgatgcacggagccaaacaa
tattacatgaaaaagcaacagcagcagcagcagcagcagcagcagcaacaagttgccaaa
aacagccgaagtgacttcaggggccagatgagtacaacatcttatctgccagcatccgcc
acggccggggtaatgtccaatgtggccccccggttcccgaaagagctcagcctcggtgga
atgaaccaccacggctccatgctgggggtcggccccccgcgccccttcaatggaagcaat
ggccatgtgtacgagaaactctccagcattgagtctgacgtgtga
DBGET
integrated database retrieval system
