Scomber japonicus (chub mackerel): 128379531
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Entry
128379531 CDS
T09718
Symbol
slc27a1a
Name
(RefSeq) long-chain fatty acid transport protein 1a
KO
K08745
solute carrier family 27 (fatty acid transporter), member 1/4 [EC:6.2.1.-]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03320
PPAR signaling pathway
sjo04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
128379531 (slc27a1a)
09158 Development and regeneration
04382 Cornified envelope formation
128379531 (slc27a1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sjo01004
]
128379531 (slc27a1a)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sjo02000
]
128379531 (slc27a1a)
Lipid biosynthesis proteins [BR:
sjo01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
128379531 (slc27a1a)
Transporters [BR:
sjo02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
128379531 (slc27a1a)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
128379531
NCBI-ProteinID:
XP_053195157
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Position
18:complement(22274874..22281184)
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AA seq
648 aa
AA seq
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MHNVASVSASLGSMGLLRLFGVSWSWSLAAGLGVYLGTRTWKYFYIAARTAKRDLNGLYV
LLRVKMALWRYVRNGSNIPSIFAQTVKLHPNKVAMIYEATGETWTFTQLDELSNAVAHWA
RGQGWVSGDVVALFMESRPLQVALWLGLAKVGVEAALINFNLRHDSLLHCIGVSGAQAIV
FGAELADAMSEVTSSSSQSMVRFCTGELSAERLACLGAQPLDPILASASKHPPSACVPPK
GMNDRLFYIYTSGTTGLPKAAIVVHSRYYRIAAFGYYAFRMRSDDVIYDCLPLYHSAGNI
MGVGQCLIHGLTVVVKRKFSASRFWEDCIKYNCTVVQYIGEICRYLLSQPVRPSEKGHKV
RLAVGNGLRPSVWEAFTERFRVAQIGEFYGATECNCSIANMDGKVGACGFNSRILPNVYP
IRLVRVDEDSMELVRDSRGLCVPCRPGEPGLLVGRINQQDPLRRFDGYANQDATRKKIAH
NVFKKNDSAYLSGDVLVMDDLGYMYFRDRGGDTFRWRGENVSTTEVEGILSSLMGQTDVA
VYGVAVPGVEGKAGMAAIADTAGSFDSSGFLQMVQGALPSYARPVFLRISPHVDTTGTFK
IQKTRLQREGYDPRLTTDQIYFLNSRAARYEAVDEELYNAIEEGRMSL
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgcacaatgtggcaagtgtctcagcctctcttggatcgatgggactcctgcgtctcttc
ggagtgtcctggtcctggagtctggcagcaggcctcggggtctatctgggcacaagaacc
tggaaatacttctacatcgcagcacgcactgccaagagagacctcaatggcctctatgtg
ctgttgagagtgaagatggctttatggcgttatgtgcgcaatggaagcaacattccttcc
atctttgcccagactgtaaaactccacccaaacaaagtcgccatgatctatgaagcaaca
ggggaaacatggaccttcacccagttagatgagctgtctaacgctgttgcccattgggca
agaggtcagggatgggtctccggggacgttgtggccctcttcatggaaagcaggccctta
caggtggcgctttggttgggcttggccaaggttggggtggaagctgcactcatcaatttc
aacctccgccatgattccctcctgcactgtatcggggtgtcaggggcccaggctattgtg
tttggagctgagcttgctgatgcaatgtcagaagtcacttcctccagcagccagtccatg
gtacggttttgtacaggagagcttagtgcagaacgtctggcatgtctgggtgctcaacct
ctggatccaattttagcctctgcatctaaacatcccccctcagcttgtgtcccccccaaa
ggcatgaacgaccgtctattttatatttacacctctggcaccacaggactgcctaaggct
gccattgtggtacacagtcgctactacagaattgccgcttttggttattatgcctttcgc
atgcgctctgatgacgtcatttatgactgtctccctctctatcactcagcgggtaatatc
atgggagttggtcagtgtctgatccatggcctcactgttgtagtgaagaggaaattctct
gccagccgcttctgggaagactgcattaagtacaactgcactgtggtgcagtatatcggg
gaaatctgccgctacttgctgtctcagccagtgcggccatcagaaaagggccacaaagtt
cggctggcagtaggaaatggcttgcgccccagtgtttgggaggccttcacagaacgcttt
cgggtggctcagattggggagttctacggagcaactgagtgcaattgtagcatcgccaac
atggatggcaaggtgggagcttgtggattcaacagtcgcattcttcctaacgtgtacccc
atccgtctggtgagggtggacgaggacagtatggagctggttcgggacagccggggcctc
tgtgtgccttgtcgccctggagagccagggcttctggtgggtcgcatcaaccagcaggac
ccactacggcgctttgatgggtatgcaaatcaggacgctacaaggaagaagatagctcat
aatgtcttcaagaaaaatgattctgcatatttatcaggtgacgtgctggtgatggatgac
ctgggctacatgtactttcgggatcgcggcggggacacgttccgctggcgaggagaaaat
gtttccactacggaggtagagggcatactaagcagtctcatgggtcagactgatgtggct
gtctacggtgtggcagtgccaggcgtggaggggaaggcaggcatggctgccattgcagac
actgcagggagttttgacagcagtggtttcctgcagatggttcaaggagctcttccttcc
tatgctcgcccagtgttcctgagaatctccccacatgtagacaccacaggtacatttaaa
atccagaaaaccaggctgcagagggagggatacgacccacgtctcacaactgaccaaatc
tactttttaaacagtagagctgcacgttatgaggctgtagatgaggagctatacaatgct
atagaggagggaagaatgtctctatga
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