Scomber japonicus (chub mackerel): 128379720
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Entry
128379720 CDS
T09718
Symbol
sptan1
Name
(RefSeq) spectrin alpha chain, non-erythrocytic 1
KO
K06114
spectrin alpha, non-erythrocytic (fodrin)
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04210
Apoptosis
sjo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
128379720 (sptan1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
128379720 (sptan1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sjo04812
]
128379720 (sptan1)
Cytoskeleton proteins [BR:
sjo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
128379720 (sptan1)
Intermediate filaments
Intermediate filament-binding proteins
128379720 (sptan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
EFhand_Ca_insen
SH3_1
SH3_9
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
SH3_2
SH3_3
SH3_10
SCO1-SenC
Motif
Other DBs
NCBI-GeneID:
128379720
NCBI-ProteinID:
XP_053195316
LinkDB
All DBs
Position
19:complement(1845052..1879246)
Genome browser
AA seq
2459 aa
AA seq
DB search
MDTAGKVLETAEDIQERRQQVLDRYRRFKDLSIMRRQKLEDSYRFQFFRRDADELEKWIQ
EKLQIASDENYKDPSNLQGKLQKHQAFEAEVQANAGAIVKLDDTGNLMITEGHFASEIIR
TRLEELHRLWDLLLQRTKEKGMRLLQAQKLVQYLRECEDALDWISDKEAMATSEELGQDL
EHVELLQKKFEEFQTDLAAHEERVNEVNQIAAKLTQEAHPEGELIVRKQDEVNAAWQRLK
GLAQQRQGKLFGAAEVQRFNRDVDETISWIKEKEQLMASDDFGRDLASVQALLRKHEGLE
RDLAALEDKVNTLGGDAERLQQTHPMNASQIHLKKDELITNWEQIRTLAAERHARLNDSY
RLQRFTADFRDLTSWVTEMKALINADELANDVAGAEALLDRHQEHKGEIDAHEDSFRATD
EAGQALLNTGHYASDEVKEKLGILTEEKESLLELWEVRRQQYEQCMDLQLFYRDTEQVDN
WMSKQEAFLLNEDLGDSLDSVEALLKKHEDFEKSLSAQEEKITALDEFATKLIQNNHYAK
EDVATRRDALLSRRNALHERAQSRRAALEDSFHLQQFFRDSDELKSWINEKMKTATDEAY
KDPSNLQGKVQKHQAFEAELSANQSRIDALQKSGQELLDGKHYASDEVAGRMEEVSSQWK
KLLEATELKGIKLREANQQQQFNRNVEDIELWLYEVEGHLASDDYGKDLTSVQNLQKKHA
LLEADVAAHQDRIDGITIQARQFQEAGHFDADNIRKKQEALVVRYEALREPMAARKQKLS
DSLRLQQLFRDVEDEETWIREKEPIAASTNRGKDLIGVQNLLKKHQALQAEITGHEPRIK
AVTQKGDAMVEEGHFAGEDVKSKLGELHGRWDTLKAKASQRRQDLEDSLQAQQYFADANE
AESWMREKEPIVGSIDYGKDEDSAEALLKKHEALMSDLSAYGSSIQALKEQAQSCRQQVA
PTDDETGKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV
KKLDPTQSSSRENLLDEHGSIALRQDQIDNQYGTLLELGEKRKDMLEKSCKKFMLFREAN
ELQQWINEKEGALTNEEMGSDLEQVEVLQKKFDDFQKDLKANESRLRDINKVASELESEG
LMAEEAPMMQAQQQELLGSAPGKDEADSKTASPWKNIRLAVQTTANFNTIKELNNRWRSL
QQLAEERSNMLGSAHEVQRFHRDADETKEWIEEKNQALNTDNYGHDLASVQALQRKHEGF
ERDLAALGDKVNSLGETAERLIQSHPEAVDDIQEKCTELNTAWSSLVGRADQRKDKLGNS
HDLQRFLSDFRDLMSWINGIRGLVSSEELAKDVTGAEALLERHQEHRTEIDARAGTFQAF
EQFGQQLLARGHYASPEIQQKLEALDRERADLEKAWVQRRMMLDQCLELQLFNRDCEQAE
NWMAAREAFLASDDKGDSLDSVEALIKKHEDFDKAINVQEEKIAALQSFADQLIGADHYA
RPEISNRRDEVLDRWRRLKAQMIEKRSKLGESQTLQQFSRDVDEIEAWISEKLQTATDES
YKDPTNIQLSKLLSKHQKHQAFEAELHANADRIRGVIDTGNALIQRGACAGSEDAVRARL
NALDEQWQFLVNKSAEKSQKLKEANKQQNFNTGIKDFDFWLSEVEALLASEDYGKDLASV
NNLLKKHQLLEADISAHEDRLKDLNGQADSLMSSNAFDTSQVKDKRDAVNGRFTKIKSMA
AGRRAKLNESHRLHQFFRDLDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAEL
GAHEPAIQSVLDTGKKLSDDNTIGQEEIQQRLAQFVEHWKELKDLSGARGQRLEESLEYQ
QFVANVEEEEAWINEKLNLVGSEDYGDTLAAVQGLLKKHEAFETDFTVHRDRVNDVCANG
EELIKKNNHHVDNISAKMSALRGKVTELERAAAQRKAKLDENSAFLQFNWKADVVESWIG
EKENSLKTDDYGRDLSSVQTLLTKQETFDAGLQAFQQEGITNITALKDQLLAAKHVQSKA
IEARHAALMKRWNQLLSNSAARKKKLLEAQEHFRKVEDLFLTFAKKASAFNSWFENAEED
LTDPVRCNSLEEIRALREAHEAFRSSLSSAQADFNQLAELDQQIKSYQVVSNPYTWFTME
ALEETWRNLQKIIKERELELQKEQRRQEENDKLRQEFAQHANAFHQWLQETRTYLLDGSC
MVEESGTLESQLEATKRKHQEIRAMRSQLKKIEDLGAAMEEALILDNKYTEHSTVGLAQQ
WDQLDQLGMRMQHNLEQQIQARNTTGVTEEALKEFSMMFKHFDKEKSGRLNHQEFKSCLR
SLGYDLPMVEEGEPDPEFESILDTVDPNRDGNVSLQEYMAFMISRETENVKSSEEIESAF
RALSTENKPYVTKEELYQNLTKEQADYCLSHMKPYLDSKGRELPTAFDFVEFTRSLFVN
NT seq
7380 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgcaggcaaagtgctggagacagcagaagacatccaggagcgccggcagcag
gtgctggaccgctaccggcgcttcaaggacctgtcgatcatgcgccggcagaagctggag
gactcttaccgctttcagttcttccgccgcgatgccgacgagttagagaagtggatccag
gagaagctgcagatcgcctcagacgagaactacaaggacccctctaacctgcagggtaag
ctgcagaaacatcaggccttcgaagcagaagttcaggccaacgccggggccatcgtcaaa
cttgacgacacaggaaacctcatgatcaccgagggccatttcgcctccgagattattcga
actcgtctagaggagctgcaccgcctgtgggacctcctgctgcagaggaccaaggagaag
ggcatgcgtctcctgcaggcccagaaactggtccagtacctgcgcgagtgtgaagatgct
ctcgactggataagtgataaggaggccatggccacctcagaagagctgggtcaggacctg
gagcacgtggagcttctgcagaagaagttcgaggagttccagacagacctggcggcccac
gaggagcgtgtgaacgaggtgaaccagatcgcagccaaactgacacaagaggcccaccct
gagggcgagctgatagttcgcaagcaggacgaggtcaacgccgcctggcagcgtctgaag
ggcctggcccagcagaggcagggcaagctgttcggagctgctgaggtgcaacgcttcaac
agggatgtggatgagactatcagctggatcaaggagaaggagcagctgatggcctcagat
gactttggtcgtgatctggccagtgttcaggctctcctgcgcaaacatgagggtctggag
agagacctggctgctctggaagataaggtcaacacactgggcggtgatgcagagcgcctg
cagcaaacacatcccatgaacgcctctcagatccacctgaagaaggatgaactcattacc
aactgggagcagattcgcactctggctgctgagcgtcacgctcgcctcaacgactcctac
aggctgcagcgcttcacagcagacttcagggatctgaccagctgggtgacagaaatgaag
gccctgatcaacgctgatgaactggccaatgacgtggccggagccgaggctctgctagac
cgccaccaggagcataagggagagatcgatgctcatgaggacagctttagagccactgat
gaagctggccaggccctgcttaatacaggacactatgcctctgatgaggtcaaggaaaag
ctgggcatcctaacggaggagaaggagtctctgctggagttgtgggaggtccgcaggcag
cagtacgagcagtgcatggacctgcagctcttctacagggatactgagcaagtcgacaac
tggatgagcaaacaagaggctttcctactgaatgaagaccttggagactctctggacagt
gtagaggcactgctgaagaaacatgaggactttgagaagtcactcagtgcccaggaagag
aagatcactgccctggacgagtttgctaccaaactgatccagaacaatcactacgccaaa
gaagatgtggctacccgcagagatgctctgctcagccgccgcaacgccctgcacgagcgt
gctcagtctcgccgcgccgccttggaggactctttccacctgcagcagttcttcagggac
tcagatgagctcaagagctggatcaatgagaagatgaagaccgccaccgacgaggcttac
aaggacccctccaacctgcagggcaaggtacagaaacaccaggccttcgaagctgagctg
tcagccaaccagagccgcatcgatgctctgcagaaatccggccaggagctgctggatggg
aagcactacgcctctgatgaggtggccggtcgcatggaggaggtcagctcccagtggaag
aaactgctggaggccactgaacttaaaggtatcaagcttcgtgaggccaaccagcagcag
cagttcaacaggaacgtagaggacattgagctgtggctgtatgaggtcgagggtcacctg
gcctctgacgactatggaaaagacctgaccagcgtccagaacctgcagaagaaacatgct
ctgctggaggctgacgtagccgctcaccaggaccgaatcgacggcataacaatccaggct
cgccagttccaagaggccggacactttgatgccgacaacatccgcaagaaacaggaagct
ctggtggtccgttacgaagccctgcgcgagcccatggccgcacgcaagcagaaactgtcc
gactctctgcggctccagcagctgttcagagacgtggaggacgaagagacttggatccgt
gagaaggagcccatcgccgcctctactaacagaggtaaagacctgatcggtgtccagaac
ctcctgaagaagcaccaggccctgcaggctgagatcacgggtcacgagccccgcattaaa
gctgtcacccagaaaggagatgccatggtggaagaaggacactttgctggtgaggatgtg
aaatctaagctgggtgaactgcatggacgctgggacacactgaaggccaaggcctctcag
aggagacaggacctggaggactctctccaggcccagcagtacttcgccgacgccaacgag
gctgagtcttggatgagggagaaggagcccattgtggggagcatagactacggcaaagat
gaggactctgctgaggccctgctgaagaagcacgaggctctgatgtctgacctgagtgct
tatggcagcagcatccaagccctgaaggaacaggcccagtcctgcaggcaacaagtggca
ccaactgacgatgagactgggaaggagctggtcttggctctgtacgactaccaggagaag
agcccacgtgaagttaccatgaagaagggtgacatcctcaccctgctcaacagcaccaac
aaggactggtggaaggtggaggtgaatgatcgtcagggtttcgttcctgctgcttacgtg
aagaaactggatcccacccagtcctcctccagggaaaacctgctggatgaacacggcagc
atcgcactgcgccaagaccagatcgacaatcagtacggcactctgttggagctgggagag
aaacgcaaggacatgttagagaagagctgcaagaagttcatgttgttcagggaggccaat
gagctgcagcagtggatcaacgagaaggagggagccctcactaatgaagagatgggctct
gacctagagcaggtggaggttctgcagaagaagtttgacgacttccagaaggatctgaag
gctaatgagtctcgcctgagggacatcaacaaagtggcatcagagctggagtctgaaggc
ctcatggctgaggaggctcccatgatgcaggctcagcaacaagagctgcttggttctgcc
cctggcaaggatgaagctgattctaagaccgcatctccatggaagaatatacgcttggct
gttcaaacaacggctaactttaatactatcaaggagctgaacaatcgctggaggtccctg
cagcagctggctgaagaaaggagtaacatgctgggcagtgctcacgaggtgcagagattc
cacagggatgctgatgaaactaaagaatggattgaggagaagaaccaggccctcaacact
gacaactatggtcacgacctggccagcgtccaggctctgcagcgtaaacacgaaggcttt
gagagagacctggcagccctgggtgacaaggtgaactctctgggagagacagcagagcgt
ctgatccagtcccaccctgaagcagtggacgacatccaggagaaatgcacggagctgaac
acggcctggagcagcctggtgggacgagccgaccagcgcaaagacaagctgggcaactct
catgacctgcagcgcttcctgtctgacttcagagatctgatgtcctggattaatggcatt
cgaggactggtgtcttcagaggagctggctaaagatgtgactggagcagaggccctttta
gaaagacaccaggaacaccgcactgagatcgacgctcgcgccggaaccttccaggccttc
gaacagttcggtcagcagctgctggctcgaggccactacgccagtcctgagatccagcag
aaactggaggctctggaccgcgagcgtgccgatctggagaaggcctgggtgcagcgccgc
atgatgctggaccagtgcctcgagctccagctcttcaacagggactgtgagcaggcagag
aactggatggcggctcgtgaagctttcctcgccagcgacgacaagggagactccctggac
agcgtggaggccctcatcaagaaacacgaagactttgacaaagccattaacgtacaggag
gagaagatcgcagctctgcagtcctttgccgatcagctgattggagctgatcattacgcc
agacctgagatctccaaccgccgcgacgaagtgcttgacaggtggcgtcgactgaaggca
cagatgatcgaaaagcgttctaagctgggagaatcccagaccctgcagcagttcagccgg
gacgtggacgagatagaggcgtggatcagcgagaagctgcagaccgcaactgacgagtcc
tacaaggacccgactaacatccagctgtccaagctgctgagtaaacaccagaagcatcag
gcgtttgaagccgagctgcacgccaacgcagaccgaatccgcggggtcattgacacgggt
aacgccctgatccagagaggagcctgtgctggcagcgaagacgcagtcagggctcgtctc
aacgctctggatgaacagtggcagttcctcgtcaacaaatcagcagaaaagagccagaaa
ctgaaggaagccaacaagcagcagaacttcaacacaggcatcaaggactttgacttctgg
ctgtctgaggtggaagctcttctcgcctctgaggattatggtaaagatcttgcttcagtc
aacaacttgctgaagaaacaccagctgctggaggctgatatttctgcccatgaggatcgt
ctgaaggatctgaacggccaggccgacagcctgatgtccagcaacgccttcgacacctcg
caggtgaaggacaagcgcgacgccgtcaacggccgcttcaccaagatcaagagcatggca
gccggccgccgcgccaaactcaacgagtcccaccgcctgcatcagttcttcagggacctg
gatgacgaagagtcttggatcaaagaaaagaagttgcttgtgagttcggaggactacgga
cgtgatttgacaggagtacagaatctgaggaagaaacacaagaggctggaggccgagctg
ggagcccacgagccggccattcagtcggtgctggacactgggaagaagctgtctgatgac
aacaccatcggtcaagaggagatccagcagaggcttgcccagtttgtcgaacactggaag
gaactcaaagatttatctggagcaaggggacagagactggaggagtcgctggagtaccag
caatttgtggcgaacgtggaagaggaagaagcttggattaatgagaagttgaatctggtg
gggagtgaggactacggagatacgctggctgctgtgcagggcttgctgaaaaagcatgaa
gcatttgagacagacttcaccgtgcacagagacagagtcaacgacgtgtgcgctaacgga
gaggagctcatcaagaagaacaaccatcacgtggacaacatcagtgccaagatgtcggct
ctgagaggaaaagtgactgagctggagagggcagcagctcagaggaaagccaagctagat
gaaaactcagctttcctgcagttcaactggaaggctgacgtggtggagtcctggatcggt
gagaaagagaacagcctgaagaccgatgactacggcagagacctgtcctccgtgcagacc
ctgctgaccaagcaggagacatttgatgctggtctccaggccttccagcaggagggcatc
accaacatcacagctctcaaagaccagctgctggccgccaagcacgtccaatcaaaagcc
atcgaagctcgccacgctgccttgatgaagcgctggaaccagctgctgtccaactcagcc
gctcgcaagaagaagctcctggaggctcaagagcacttcagaaaggttgaggacttgttc
ctgacattcgccaagaaagcgtcggccttcaacagctggtttgagaacgcagaggaggac
ctgacggacccggtgaggtgcaactctctggaggagatccgggcgctgcgcgaagcccac
gaggccttccgctcctcgctgagctcggcccaggccgacttcaaccagctggccgagctg
gaccagcagatcaagagctaccaggtggtgtccaacccttatacctggttcaccatggag
gccctggaggagacctggaggaacctgcagaagatcatcaaggagagagagctggagcta
cagaaggagcagaggaggcaggaggagaacgacaagctgcgtcaggagtttgcgcagcac
gccaacgctttccaccaatggctgcaggagacaaggacatatctgctggacgggtcgtgt
atggtagaagagtctggaacactggagtctcagctggaggccacaaaacgtaagcaccag
gaaatccgggccatgcgcagccagctgaagaagatagaagacttgggagcagctatggaa
gaagcactgatcttagataataaatacacagagcacagcacagtggggctggctcaacag
tgggaccaactggatcagctgggaatgaggatgcaacacaacctggagcaacagatacag
gccaggaacactactggagtgacagaagaggctctgaaggagttcagtatgatgttcaag
cacttcgacaaggagaagtcaggtcgtctcaaccaccaggagttcaagtcatgtctgcgc
tcgctgggctacgacctgcccatggtggaagaaggagaaccagatcctgagtttgagtcc
atactcgacactgtggatcccaacagggatggaaacgtgtcgttgcaggaatacatggcg
ttcatgatcagccgcgagacagagaatgtgaagtccagtgaggagatagagagcgccttc
agagctctcagcaccgagaacaaaccctacgtcactaaagaagaactctatcagaacctg
accaaggagcaggcagactactgcctgtcacacatgaagccctacctcgacagcaagggc
cgcgaactgccgacagctttcgactttgttgaattcacccgctcgcttttcgtcaactga
DBGET
integrated database retrieval system
