Scomber japonicus (chub mackerel): 128379751
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Entry
128379751 CDS
T09718
Symbol
fubp3
Name
(RefSeq) far upstream element-binding protein 3 isoform X1
KO
K13210
far upstream element-binding protein
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sjo03019
]
128379751 (fubp3)
03041 Spliceosome [BR:
sjo03041
]
128379751 (fubp3)
Messenger RNA biogenesis [BR:
sjo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
128379751 (fubp3)
Spliceosome [BR:
sjo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
128379751 (fubp3)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_PNO1_2nd
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
128379751
NCBI-ProteinID:
XP_053195356
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All DBs
Position
19:complement(17831753..17855267)
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AA seq
559 aa
AA seq
DB search
MMMMAELVQGQASVAQPGTKDDFADTIRRVRQMAAKMGGDQMPNINNSSPVLDPSLYGFG
GQKRSLDNGVGNHLGAMVHQRALTTEDFKVPDKMVGFIIGKGGEQISRIQLESGCKIQIA
SDSGGMLDRPCTLTGSPENIDQAKRLLSEIVEQCRYGPGFHCEMDGNGAIQQILIPANKV
GLVIGKGGETIKQLQERTGVQMIMIQDDPMPTGADKPLRITGDPHKVQQARELVVKLIRD
KDQGDFRVGRADFGSKMGGSSLDVVVPRFAVGIIIGRNGEMIKKIQNDAGVRIQFKQDDG
VSPDRVAQVMGQPDHCHHAVHLINELVQTAQERDGFGGVMSRRGRGDCNMGGPGGLQEVT
YAVPADKCGLVIGKGGETIKNIKEQSRAHVELQRNPPPNTDPNVRIFSIRGTPQQLEKAR
QLIDERIGGPGMGGNSSFGMNPYNQGPTTPPQHGPQTFMTGGWGTTFQIWQPQGQQDHSH
NGSQTGQMDWEQYYKKLGQQNQAQSTAPEYNKAWGQTAGPASQQTSNPDYNAWVDFYRQP
MAYFNQGAQQTQAPGLQDH
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatggcggagctggttcagggacaggcctcggtggctcagcccggaacgaaa
gatgacttcgcagacacgatacgtcgggtccgacagatggcagccaagatgggaggagac
cagatgcccaacatcaacaattcctctccagtcttagacccctccctgtacggatttgga
ggccaaaaacgctcactagacaatggagtagggaaccatcttggtgcaatggtacatcaa
agggctcttactacagaagacttcaaagtgcctgataagatggtgggattcatcattggc
aaaggaggagagcagatttcaagaattcagctggaatcgggttgtaagatccaaattgct
tcagacagtggaggcatgctggacagaccctgcacactgactgggagcccagagaacatt
gatcaggccaagaggctgttgagtgagattgtggagcagtgtcgatatggtccgggcttc
cactgtgagatggacggcaacggtgcaatccaacagatccttatccctgccaacaaagtc
ggcctggtcatcggcaagggaggagaaaccatcaaacaactgcaggagagaacaggagtg
cagatgataatgattcaggatgaccccatgcccactggagcagacaagcccctgagaatc
actggggatccccacaaagtgcagcaagcccgtgaacttgtggtgaagctcatccgagat
aaggaccaaggtgacttcagggttggcagggcagactttggatccaaaatggggggaagc
agtctggatgtggttgtacccaggttcgcggtcggcatcatcattggcaggaatggagag
atgatcaagaagattcagaacgatgccggggtcaggatccagttcaaacaagatgatgga
gtcagtcctgaccgtgttgcccaggtgatgggccagcccgaccactgccaccatgcggtc
cacctcatcaacgaactggttcaaacagctcaggagcgtgatgggtttggaggagtaatg
agtcgtcgaggccgaggtgactgcaacatgggagggcccggaggtctgcaggaggtgaca
tatgctgtacctgccgacaagtgtggcctggtgatcggcaaaggtggagaaaccatcaag
aacatcaaagagcagtctcgtgcccacgtggagctacagagaaacccgccgcccaacaca
gaccccaacgtgcgcatcttctccatccgaggcacccctcagcagttggaaaaggcccgc
cagctgatcgatgagagaattgggggtccaggaatggggggcaacagcagcttcggtatg
aatccctacaaccaaggaccaaccactcctccccaacatgggcctcagacgttcatgaca
ggaggatggggtacaacttttcagatatggcagcctcaaggccaacaagaccacagtcac
aatggatcccagacgggccagatggactgggagcagtattataaaaagctaggtcagcag
aaccaggctcagagtactgctcctgaatacaacaaagcttggggccagacagctggtcct
gcatctcagcagacctctaatcctgactacaacgcctgggttgacttctacagacagccg
atggcgtacttcaaccagggcgcacagcagacacaagccccgggccttcaggatcattag
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