Scomber japonicus (chub mackerel): 128379772
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Entry
128379772 CDS
T09718
Symbol
wdr41
Name
(RefSeq) WD repeat-containing protein 41
KO
K23610
WD repeat-containing protein 41
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128379772 (wdr41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128379772 (wdr41)
Membrane trafficking [BR:
sjo04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
128379772 (wdr41)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_TEP1_2nd
WD40
WD40_Prp19
WDR55
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
128379772
NCBI-ProteinID:
XP_053195379
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Position
19:complement(26670913..26681914)
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AA seq
448 aa
AA seq
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MLRWILGGREAQGSVEKSSVLCIGEEQPKNWFTELQVLKGHFDIVRFLVQIDDFRCASAG
DDGLVLVWNVETGERLQELRGHSQQITAITTFTCSNGLMSHTSLITASSDRSLSLWDPDT
GNRVQTISDLQSSVKCLLVLERLCVLVSGGEELCVWNKDFQLQCHRQNHSDTGITALIEL
PKNCVAAAMDKEIVIYRLTVSTDSSISVAEIRCLSDHQDQIRALINVNDGLFASGSHMGE
LILWDAIEWNILAYEHILWEESQSQAEIRMGAPKPSEMSIQHLTTNGKLILAAVGSGLYV
YSVLTKTVVAYRKVAHDSNILHTMLLSDSELMSCSEDGSVRMWEIQDLPLPAEPATPGFF
GMWSFGRSSKQAGPPSKKIIDVPNIRTLELTGDLIGHSGAVQMFVSFNENGLVTCSTDHL
LILWKNGERQSHLRSLVLFQKLEENGGL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggtggatacttggtggacgggaggctcaaggctctgtggagaaaagctccgtg
ttgtgcattggagaggaacagcccaaaaactggttcactgagctgcaggtgctgaaagga
cattttgacattgttcgatttctggtgcagattgatgacttcagatgtgcctcagcgggg
gatgatggccttgttttggtgtggaacgtcgagactggcgagaggctgcaggagctgaga
ggccattcccagcaaataacagccataaccaccttcacctgtagtaatggactcatgtcg
cacacttcgctcatcaccgcctcctcagaccgaagtctaagtttgtgggatcctgataca
ggaaacagggttcagactatttcagatcttcagtcgtctgtaaagtgtttgctggtgctg
gagcggctgtgtgtgttggtctccggtggggaggaactgtgcgtgtggaacaaagatttt
cagctgcagtgtcacaggcagaaccacagcgacaccggaattactgccttgatagagctt
cccaagaactgtgtagcagcagcgatggataaagagatcgtgatctacaggctgacggtc
tcaactgattcctctatatcagtggctgagatccgctgtctgtccgaccaccaggaccag
attcgagctcttatcaatgtcaacgacgggctcttcgccagcggttcccacatgggcgag
ttgattctgtgggatgcgatcgagtggaacatcctggcctatgagcacatcctgtgggag
gagtctcagtcccaggccgaaatacgaatgggcgctcccaaacccagcgagatgtccatt
cagcacctgaccaccaacggaaagctcatcctggcagctgtgggcagcggtctgtacgtg
tacagcgtcctgacgaagacggtggtggcgtacaggaaggtcgcccatgactccaacatc
ttacacaccatgctgctatctgacagtgagctgatgtcctgctctgaggacggcagcgtg
aggatgtgggagatacaagacctgcctttacctgctgaaccagccactccagggttcttt
gggatgtggagttttggtcgctccagtaaacaggctggacctccgtcaaagaagatcata
gacgtcccaaatattcggacgctggagttgacgggagatctgatcggtcactcaggagca
gtccagatgtttgtcagcttcaacgagaacgggctggtgacgtgttcgacggatcacctg
ctgatcctgtggaagaacggagagaggcagtctcacctgcgcagcctggtgcttttccaa
aaactggaggagaacggaggactttga
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