KEGG   Scomber japonicus (chub mackerel): 128379772
Entry
128379772         CDS       T09718                                 
Symbol
wdr41
Name
(RefSeq) WD repeat-containing protein 41
  KO
K23610  WD repeat-containing protein 41
Organism
sjo  Scomber japonicus (chub mackerel)
Pathway
sjo04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    128379772 (wdr41)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sjo04131]
    128379772 (wdr41)
Membrane trafficking [BR:sjo04131]
 Autophagy
  Other autophagy associated proteins
   Rab associated proteins
    128379772 (wdr41)
SSDB
Motif
Pfam: Beta-prop_TEP1_2nd WD40 WD40_Prp19 WDR55 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML Beta-prop_CAF1B_HIR1 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_RIG_2nd WD_LRWD1
Other DBs
NCBI-GeneID: 128379772
NCBI-ProteinID: XP_053195379
LinkDB
Position
19:complement(26670913..26681914)
AA seq 448 aa
MLRWILGGREAQGSVEKSSVLCIGEEQPKNWFTELQVLKGHFDIVRFLVQIDDFRCASAG
DDGLVLVWNVETGERLQELRGHSQQITAITTFTCSNGLMSHTSLITASSDRSLSLWDPDT
GNRVQTISDLQSSVKCLLVLERLCVLVSGGEELCVWNKDFQLQCHRQNHSDTGITALIEL
PKNCVAAAMDKEIVIYRLTVSTDSSISVAEIRCLSDHQDQIRALINVNDGLFASGSHMGE
LILWDAIEWNILAYEHILWEESQSQAEIRMGAPKPSEMSIQHLTTNGKLILAAVGSGLYV
YSVLTKTVVAYRKVAHDSNILHTMLLSDSELMSCSEDGSVRMWEIQDLPLPAEPATPGFF
GMWSFGRSSKQAGPPSKKIIDVPNIRTLELTGDLIGHSGAVQMFVSFNENGLVTCSTDHL
LILWKNGERQSHLRSLVLFQKLEENGGL
NT seq 1347 nt   +upstreamnt  +downstreamnt
atgctgcggtggatacttggtggacgggaggctcaaggctctgtggagaaaagctccgtg
ttgtgcattggagaggaacagcccaaaaactggttcactgagctgcaggtgctgaaagga
cattttgacattgttcgatttctggtgcagattgatgacttcagatgtgcctcagcgggg
gatgatggccttgttttggtgtggaacgtcgagactggcgagaggctgcaggagctgaga
ggccattcccagcaaataacagccataaccaccttcacctgtagtaatggactcatgtcg
cacacttcgctcatcaccgcctcctcagaccgaagtctaagtttgtgggatcctgataca
ggaaacagggttcagactatttcagatcttcagtcgtctgtaaagtgtttgctggtgctg
gagcggctgtgtgtgttggtctccggtggggaggaactgtgcgtgtggaacaaagatttt
cagctgcagtgtcacaggcagaaccacagcgacaccggaattactgccttgatagagctt
cccaagaactgtgtagcagcagcgatggataaagagatcgtgatctacaggctgacggtc
tcaactgattcctctatatcagtggctgagatccgctgtctgtccgaccaccaggaccag
attcgagctcttatcaatgtcaacgacgggctcttcgccagcggttcccacatgggcgag
ttgattctgtgggatgcgatcgagtggaacatcctggcctatgagcacatcctgtgggag
gagtctcagtcccaggccgaaatacgaatgggcgctcccaaacccagcgagatgtccatt
cagcacctgaccaccaacggaaagctcatcctggcagctgtgggcagcggtctgtacgtg
tacagcgtcctgacgaagacggtggtggcgtacaggaaggtcgcccatgactccaacatc
ttacacaccatgctgctatctgacagtgagctgatgtcctgctctgaggacggcagcgtg
aggatgtgggagatacaagacctgcctttacctgctgaaccagccactccagggttcttt
gggatgtggagttttggtcgctccagtaaacaggctggacctccgtcaaagaagatcata
gacgtcccaaatattcggacgctggagttgacgggagatctgatcggtcactcaggagca
gtccagatgtttgtcagcttcaacgagaacgggctggtgacgtgttcgacggatcacctg
ctgatcctgtggaagaacggagagaggcagtctcacctgcgcagcctggtgcttttccaa
aaactggaggagaacggaggactttga

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