Scomber japonicus (chub mackerel): 128379777
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Entry
128379777 CDS
T09718
Symbol
arrdc1b
Name
(RefSeq) arrestin domain-containing protein 1b
KO
K26228
arrestin domain-containing protein 1
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128379777 (arrdc1b)
Membrane trafficking [BR:
sjo04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
128379777 (arrdc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arrestin_C
Arrestin_N
Vps26
Spo0M
LDB19
Motif
Other DBs
NCBI-GeneID:
128379777
NCBI-ProteinID:
XP_053195385
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All DBs
Position
19:complement(7952254..7991328)
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AA seq
441 aa
AA seq
DB search
MGKLQEFDITFANNKVVYSPGESIRGTVKIRTGNSLQYKAIKVNCQGACGITNKLNDTSW
ALEEQYFNSTLSVADKGTLVAGEHNFPFQFVIPVAVPTSFEGPFGKIVYRVRAVIDTPRF
SKDYKAQKPFYLLNLLNLNEVPDIEHPSYAVITKKFSYLLVKTGTLMMKARSDLRGYIPG
QVIKLATEIHNKSGKDTGCVLASLIQKVTYKTKRPLFDLRTIAEVEGAGVKAGKHAEWRE
QIIVPPLPQSALACCGLIDIDYFIQVSLKSPDTVVTLPIYIGNIAVNLSPSRPMPTSPVH
CGASVAPGAAGVTPSAPPAEEEVEEGLCAGGVASEEIPTKSHSQQDPSGQPVTMSPSAFS
HAPGAALPPGHRRTDASAPLFCVSTGATIPFFTEGNVTPIPTSCSLILPPEYSSWDYPHE
PPPTYEESCSSANSSFNSSRQ
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagcttcaagaatttgatatcacttttgccaacaacaaggtggtgtacagtcct
ggagagtctatacgcggaactgtgaaaatacgaaccggcaactcgctgcaatacaaagcc
atcaaggtgaactgtcagggcgcatgcgggatcaccaataaactgaatgacacatcgtgg
gctctggaggagcagtacttcaacagcacgttgtctgtcgctgacaaaggaactctcgta
gctggcgaacacaatttccctttccagtttgttattccagttgctgtgccgacttcattc
gagggaccctttgggaagatagtttaccgtgtaagagcagtcatcgacacaccccgcttc
tccaaggactacaaagcccagaagcccttctaccttctcaacctgctcaacctgaatgag
gtgcctgacattgagcatccgagctatgctgtgatcactaagaagttcagctacctcctg
gtgaagacggggaccctgatgatgaaagctcgcagcgacctcaggggttacatccccggc
caggtgatcaagttggccaccgagatccacaacaagtctgggaaggacacgggatgtgtg
cttgccagtctcatacagaaagtgacctataagaccaagcggcctctgtttgacctgcgg
accattgcggaggtggagggagctggagtgaaagcaggaaaacacgcagagtggagggag
cagatcattgtccctccacttcctcagtcagcactggcttgctgcggcctcatagatatc
gactatttcattcaggtgtcactaaaatctccagacacagtcgtcactctgcccatctac
atcgggaacatcgctgtgaacttgtctccatcgaggcccatgcccaccagtccggtccac
tgcggcgcgagcgtggcacccggcgcggcaggggtgacacccagcgccccgccagcggag
gaggaggtggaggaggggttgtgtgcaggtggtgttgccagcgaggagattcccaccaag
agtcactcacagcaggatccctctggtcagccggtcaccatgtcccctagcgccttcagt
cacgcccccggtgcggcgctgccacccggccacagacgaaccgacgcgtcagctcccctc
ttctgtgtgtccacgggggccaccatacctttcttcacagagggaaatgtcactcctatc
cccacttcctgttctctcattctccctccagagtacagcagctgggactaccctcacgag
cctccacccacttatgaggaaagctgcagtagcgccaactccagtttcaacagcagcaga
cagtag
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