Scomber japonicus (chub mackerel): 128379872
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Entry
128379872 CDS
T09718
Symbol
zswim6
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger SWIM domain-containing protein 6
KO
K25704
zinc finger SWIM domain-containing protein 6
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sjo03037
]
128379872 (zswim6)
Cilium and associated proteins [BR:
sjo03037
]
Other cilia and associated proteins
Stereociliary proteins
128379872 (zswim6)
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Ortholog
Paralog
GFIT
Motif
Pfam:
ZSWIM4-8_C
ZSWIM_N
TPR_ZSWIM8
SWIM
DUF6247
Motif
Other DBs
NCBI-GeneID:
128379872
NCBI-ProteinID:
XP_053195487
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All DBs
Position
19:complement(25714067..25775827)
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AA seq
1093 aa
AA seq
DB search
MAELVQQPPAKRLCCRPGYSATCRLGQRAAGAPCGGSAAAQGASCATQSPETLLDISARR
VAEKWPFQRVEECFERIPEPVQRRIVYWSFPRSEREICMYSSFNSSSSSGGGGVGGSAEE
CAGSSGESGDETRLPFRRGIGLLESGCVDNVLQVGFHLSGTVREPATASEPELVCNVSVS
FDRCKITAVTCSCGNKDIFYCAHVVALSLYRVRKPEQVKLRLPISETLFQMNRDQLQKFV
QYLITVHHTEVLPTAQKLADEILSQNSEINQVHGAPDPTAGASVDDENCWHLDEEQVQEQ
VKLFLSQGGYHGSGKQLNLLFSKVREMLKMRDSNGARMLTLITDQFMGDPRLALWRQQGT
TMTDKYRQLWDELGALWMCIVLNPHCKPEQKSFWLRQLRRWNGVDVCPLEDGNHGSELTN
LTNALPQGPPGNPDSLTRPHRTVFTRAIEACDLHWLDPHLQHIITEDHYTNYCYHDNLDS
SLFDPRGWPLWHEHVPTACARVDALRSHGYPKEALRLAIAIVNTLRRQQQKQLEFFRTHK
KELLHKGVTSITNMEGWVGHPLDPIGTLFSTLMETGRSIDDGAAVLLDFSGSLGSGRRSE
HGVCPAQRFLEEGESFMSLAIETSLIGLGQQRVMPDGLYAQEKVCRNEEQLLARLQEVEL
SDMLVKIFRKQAVFLLEAGPYSGLGELIYRESVPMHTFAKYLFTSLLPHDAELAYKIALR
AMSPSDARKLEIVLESIQKNIHSSSHIFKLAQDAFKIATLMDSLLDITLLKVSLELGLQV
MRMTLSXLNWRRREMVRWLVTCATEVGVFALDSIMQSWFTLFSPTEATSVVASTVMSNST
IVRLHLDCHQQENLANSARTLALQCAMKDPQNCALSALTLCEKDHIAFETAYQIVLDAAA
TGMNYTQLFTIARYMEHRGYPMRAYKLATLAMTHLNLSYNQDTHPAINDVLWACALSHSL
GKNELAAVIPLVVKSVKCATVLSDILRRCTLTTPGMVALHSRRNSGKLMSLDKAPLRQLL
DATIGAYINTTHSRLTHISPRHYSEFIEFLSKARETFLMAHDGHIQFTQFIDNLKQIYKG
KKKLMMLVRERFG
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atggcggagctcgtacagcagcccccggccaaacgcctctgctgtagaccgggatacagc
gcgacatgtcggcttggccagcgggccgcgggggctccgtgcggcggctccgctgcagcg
cagggcgcatcgtgcgcaacccaaagcccggagactctgctggacatctcggcgcggaga
gtggcggagaagtggccgtttcagcgggtggaggagtgctttgagaggatcccggagccc
gtgcagaggcggatagtgtactggtctttcccgaggagcgagagggagatctgcatgtac
tcctcgtttaatagctccagcagcagcggcggtggtggtgttggcggcagcgcggaggag
tgcgcaggtagtagcggggagagcggcgacgaaactcggctgccgttccgacggggcatc
ggtctcctggagagtggctgcgtggataatgtgctgcaagtcgggtttcacctcagcggc
acagtaagagaaccggctacggcctcggagcccgagctggtctgcaacgtgagcgtcagc
ttcgaccgatgtaagatcacagcggtgacgtgcagctgcggcaacaaggacatcttctac
tgcgctcatgtcgtggcgctctcgctgtaccgggtacggaagcccgagcaggtcaaactg
cggctgcccatctcagagacgcttttccagatgaacagagatcagctgcagaagtttgtt
cagtacctgatcaccgtccatcacaccgaggtgctgccgaccgcacagaaactggccgat
gaaatactgtcgcaaaactctgagatcaaccaggtgcacggagctccggatccgacggcg
ggggcgagcgtggacgacgagaactgctggcatctggacgaggagcaggttcaggaacag
gtcaagctctttctctcccagggcgggtaccatggctcggggaagcagctcaacttactg
ttcagcaaggtgagggagatgctgaagatgagggactcgaacggtgctcgcatgttaacg
ctgatcacagaccagttcatgggcgaccccagactggcgctgtggaggcaacaagggaca
accatgactgacaagtacaggcagctgtgggacgaactaggagccctgtggatgtgcatc
gtgctgaaccctcactgtaaacccgagcagaagagtttctggctccgacagcttcgcagg
tggaacggcgtggacgtctgccccttggaggacggtaaccatggcagcgagctgaccaat
ctgaccaacgctctgccccagggccctcctggcaacccagattcactgactcggcctcac
cggacggttttcacgcgagcgatcgaggcctgcgacctgcactggctggacccccacctg
cagcacatcatcaccgaggaccactacaccaactactgttaccatgacaacctcgacagc
tccctcttcgacccccggggttggccgctgtggcacgagcatgtcccgacggcgtgcgca
cgagtggacgcgctcagatcgcacggttaccccaaggaggcgctcaggctcgccatcgca
atagtcaacacgctgcggaggcaacagcagaagcagctggagttcttccgcacgcacaaa
aaagagctgctccataaaggcgtcacctcaattaccaacatggagggctgggtgggtcac
cctctggatcccatcggcaccctgttcagcaccctgatggagacggggcgaagcatcgat
gacggagccgcggtgctgctcgacttctcaggctcgctgggttcaggtagaaggtcggag
cacggcgtttgcccggcgcagcgcttcctggaagaaggcgagtcgttcatgtcgctggcc
atagagacgtctctgattggcttagggcagcagagagtgatgccagacggactctacgcc
caggagaaagtgtgccgcaacgaagagcagctactggccaggctgcaggaagtggagtta
agcgacatgttggtgaagatcttccgcaagcaagctgttttcctgctcgaggctggtcct
tacagtggtctgggggagttaatctacagagaaagcgtccccatgcacacttttgccaag
tatctcttcacctccctgctacctcatgacgccgaactggcgtataaaattgcactgagg
gccatgagccctagtgacgctcgtaaactagaaatagtgttagagtccatccagaagaac
atccactcctcatctcatatcttcaaactggcccaggatgccttcaaaatcgccactcta
atggacagtctgctggacatcacactgctcaaagtctccctggagctgggccttcaggtg
atgagaatgactctgtctnacctaaactggcggagaagagagatggtgcgatggttggtc
acgtgtgccacagaagttggtgtgttcgcgttggacagcatcatgcagagctggttcacc
ctcttctctcccaccgaagccaccagcgtcgtggccagcaccgtcatgtccaacagcacc
atcgtccgcctgcacctggactgccaccagcaggagaacctggccaactccgcccgcacc
ctggccctgcagtgcgccatgaaggacccccagaactgcgccctatcggctctgacgctc
tgcgagaaggaccacattgccttcgagacagcctatcagattgtactggacgcggccgcc
acgggaatgaactacacacagctgtttacaatagcgcgctacatggagcaccgcggttac
cccatgagggcgtacaagctagcgacgttagccatgactcacctgaacctcagctacaac
caagacacgcacccggccatcaacgatgtcctgtgggcgtgcgctctcagccactcgctg
gggaaaaacgaactagcggccgtcatccccctagtggtgaaaagcgtgaagtgcgccacc
gtgttgtcggacattttgcggcggtgcacgctaacgacgccggggatggtggcgctgcac
agtcgcaggaactctgggaagctaatgtctctggataaggctccactcaggcagctactg
gacgccacgatcggggcttacatcaacacgacgcactcgcggctgacgcacatcagcccg
cgccactacagcgagttcatcgagttcctcagcaaagccagagagacgtttctgatggca
cacgacggacacatccagttcacgcagttcatagacaacctgaaacagatttacaagggc
aaaaagaaactcatgatgctcgttcgagagagatttggttga
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