Scomber japonicus (chub mackerel): 128379873
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Entry
128379873 CDS
T09718
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128379873
04121 Ubiquitin system [BR:
sjo04121
]
128379873
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
128379873
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
128379873
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GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
hAT-like_RNase-H
Motif
Other DBs
NCBI-GeneID:
128379873
NCBI-ProteinID:
XP_053195488
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Position
19:26284092..26286827
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AA seq
630 aa
AA seq
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MNPSQKLVCNAINWPRTLSVAFRHLANQMQPWTLGPCMRTPGVTKMAEAGGEHARDAEET
LVPKTNSTSAIWQYFGFKKEDNLQSQVLCRTCRAVVATSRGNTTNLHHHLLHHHKELHEQ
FKASQSRAPSSSKATRPSLQQQSIAQSFVRLTPYEKSSKRHIEITEAITHCLAKDMMPTN
TVTRPGFLSLVHKLDRRYEVPSRTYFSDVAIPNLYEKCRTTVESELDQVEYFACTTDLWS
SRTTEPYISLTVHFLDREFQLKTRCLQTQYFPGEHTGENIAYGLREALTSWHLGEEQLTC
VTTDNGANVVKAIELNHWVRLQCFGHRLHLAIENALKDDRRIARATGLCKKMVGHFSHSW
KQKTALRRAQQKHNLPEHALVTECPTRWGSKQKMMGRILEQQRALSDVLSADRKTRHLDP
SWQDLETSVLAGKEGDTDLTKDIKAKILDYMNTKYDDPATQELLDVASFMDPRFKSSYIS
VEKVQDIKTRVMSEMKDTSQKEGEDSQAKSVNPPIDKRAKPSLGSLLKSNPGPTSTTFDM
QMEQAIEAEVNSYLLSPTIDSEADPLTWWKLHHLTYPKLSKLARRYLCIPATSSPSERLF
STSGNVVTCQRACLKPTKVNMLVFLAKNLP
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgaacccatcgcaaaagctggtctgtaatgcgataaattggccacgcacactcagcgtg
gcattccgacatttggccaatcagatgcagccctggacactcgggccatgcatgcgcaca
cctggagtgacgaagatggcggaggcaggaggagagcatgcgagggatgcggaggaaacg
cttgtgccaaaaacaaatagcacctctgctatttggcagtacttcggattcaaaaaagaa
gacaacctacagagtcaggtattgtgcaggacctgcagggcggttgttgcaacatccaga
ggtaacaccaccaacctccatcaccacctgctgcaccaccataaagagctgcacgagcag
ttcaaggccagtcaatcgagagcgcctagcagcagtaaagcaacgcgaccatcactgcag
caacagtccattgctcagagttttgtgagactgactccatatgaaaagtcctctaaacga
cacattgaaataacagaggccataacccactgtttggcgaaggatatgatgcccactaac
accgtgaccagacccggatttctgagtctagttcacaaactcgatcgacgatatgaggtg
ccatcacggacttatttttctgatgttgctattccaaatctgtatgaaaagtgcaggacg
acggtggagtcggagctggaccaggtcgagtactttgcctgcaccacagacctctggtcc
agccgaaccacagagccctacatcagtctcactgtacactttttggaccgggaatttcag
ctgaaaacacggtgtctccagacacagtattttccaggagaacacaccggcgagaacatt
gcttatgggttacgtgaagctttgaccagctggcatctcggagaggagcaactaacctgt
gtgaccactgacaacggagcaaatgttgttaaggccatcgagcttaaccactgggtcaga
ctacagtgttttgggcaccggctgcatctcgctatcgaaaatgctcttaaagatgacagg
cgcattgcccgtgctactgggctgtgcaaaaaaatggtgggacatttctcccacagttgg
aagcagaagacagctctcaggagagcacaacagaagcacaaccttccagagcatgccctt
gtcactgaatgcccaaccaggtggggctcaaaacagaaaatgatggggaggatcttggag
cagcagcgggccttatctgatgtcctctcagcagaccgaaaaacacggcatctggatccc
tcctggcaagacctggagacatcagttcttgcaggaaaagaaggtgacacagatttaacc
aaggatatcaaagcaaaaatcctggactacatgaatacaaaatatgatgacccagcaaca
caagaacttctagatgttgcatcattcatggaccccaggttcaagagcagctacatcagt
gtcgagaaggtccaagacatcaagaccagggtgatgtcggagatgaaggatacatcgcag
aaggagggagaagattctcaggccaaaagtgtaaatccacccatcgacaagagggcaaaa
ccatcactgggcagtttgctcaaaagtaatccaggtccaacctccaccacattcgacatg
cagatggagcaagctattgaagctgaagtcaacagctacctactgtcccccaccattgac
agtgaggcagacccgttgacttggtggaaactccaccacttgacttacccgaagctgagt
aaactagctcggcggtatctgtgtatacctgccactagctcaccctcagagaggctcttt
agcacatcagggaatgtggtaacatgtcagcgtgcatgtttgaaacctaccaaagttaac
atgttggtgttcttggctaagaacttgccctga
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