Scomber japonicus (chub mackerel): 128379907
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Entry
128379907 CDS
T09718
Symbol
scarb1
Name
(RefSeq) scavenger receptor class B member 1
KO
K13885
scavenger receptor class B, member 1
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03272
Virion - Hepatitis viruses
sjo04145
Phagosome
sjo04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
128379907 (scarb1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128379907 (scarb1)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
128379907 (scarb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128379907 (scarb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sjo04147
]
128379907 (scarb1)
Membrane trafficking [BR:
sjo04131
]
Endocytosis
Phagocytosis
Scavenger receptors
128379907 (scarb1)
Exosome [BR:
sjo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128379907 (scarb1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CD36
PorA
Motif
Other DBs
NCBI-GeneID:
128379907
NCBI-ProteinID:
XP_053195521
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Position
19:28503186..28520594
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AA seq
386 aa
AA seq
DB search
MAINKFKLAIGFIVAGVITVSFGLVLLFVGPLIIDDQIVKNTVIDPSNDLSYTMWKDIPV
PFFMSVYFFNVLNPKEILNGEKPMVEQRGPYVYRKRCQKDNITFHPNDTVSYREYRQYYF
EPSMSVGNESDVVTIPNMLVLGAAVMMENLPYAVRLMISATFKTFNEGPFLTKTVGELMW
GYDSGLVDFLNKYLPGMLPSTGKFGLFAEFNNSNTGLFTIFTGKDNIRNVHKVDSWNGLT
ELDYWRSHQSNMINGTAGQMWPPFMTKESTLPFYSPDACRSMELVYQRPGNFKGVPLYRY
VAPKTLFANGTDYAPNEGFCPCRQSGLLNVSSCRHNSPVFISHPHFYNADPVLLDYVQGL
SPNEDQHGLFIDIHPWVRGHFCCFYN
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggccataaataaatttaaactcgctataggttttatagtagcaggtgttataactgtg
tctttcggcttggtgcttctttttgttggacctttaattatcgacgaccagatagtaaag
aacactgtgatcgacccaagcaatgacctgtcctacaccatgtggaaggatatccccgtt
cccttcttcatgtccgtctacttcttcaacgtcctgaacccgaaggagatcctgaacgga
gagaagcccatggtggagcagagagggccttatgtgtacagaaaacgctgtcagaaagac
aacatcacatttcaccccaacgatacagtgtcgtacagagaatacagacagtactacttc
gagccttcgatgtctgtaggcaacgagtcggacgtggtcaccattcctaacatgttggtc
ctgggtgcagccgtgatgatggaaaacctgccctatgctgtccgtttaatgatcagcgcc
accttcaagactttcaacgaggggcccttcctcaccaaaacagtaggagagctgatgtgg
ggttatgacagcggactggttgatttcctcaataaataccttcccggcatgctgccctcc
acggggaagtttggcctctttgctgagtttaacaactccaacaccggcctgttcaccatc
ttcaccggaaaagataacatcaggaacgtccataaagtcgactcctggaacgggctgacg
gagctggactactggaggtcccaccagagcaacatgatcaatggaacagctggacagatg
tggcctccattcatgaccaaagaaagcactttacctttctacagccctgacgcctgcaga
tctatggagctcgtttaccagcgtcctggtaatttcaaaggtgtccctctgtatcgatac
gttgcacccaagacgctgttcgccaacgggaccgactacgctcccaatgaaggcttctgc
ccctgtagacagtctggcctgttgaatgtcagcagctgccgtcacaactctccggtcttc
atctctcatcctcacttctataatgctgatcctgtgctgctggactacgtgcagggcctc
agtcccaatgaagaccagcatggcctcttcatcgacatccacccatgggtgaggggtcac
ttctgctgcttttataactga
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