Scomber japonicus (chub mackerel): 128379919
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Entry
128379919 CDS
T09718
Name
(RefSeq) uncharacterized protein LOC128379919
KO
K22146
gasdermin-E
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
128379919
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sjo02000
]
128379919
Transporters [BR:
sjo02000
]
Other transporters
Pores ion channels [TC:
1
]
128379919
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gasdermin
Gasdermin_C
TPR_5
Motif
Other DBs
NCBI-GeneID:
128379919
NCBI-ProteinID:
XP_053195533
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All DBs
Position
19:29661117..29668622
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AA seq
428 aa
AA seq
DB search
MFGDISKAVVKQLGTKDLICNEDLIQDIKMLTLVQPKRNKLGITKYMMKDKTLLDLLEEP
HFTPDVTEEVLVEDFKIQRRKGGEGSVAAGVHDAAQMKMNASMDTVDGVKEGFTLKRKTV
DTNELEEMEDKKIKMKMVDRFNLQKEKLTCVYQTVYTTTPLTFYSEATKSGLLSGMCSKI
FHVSMARNKKKEISYKALKGATFAYGLMEIKTAGSPLRITEFKRYEKGWNISFDGDGDSC
KTLKKLKEEISAKARLLQPLQTLPQSSRCNLLKALSEIVHDRDALTLLEETLDEEMTECP
QSQSVSSFMDLLREASSRQRDAVHLLVTALDSLPDGAAALLTACSPETLTVLQQLVSCLM
EDGQARLPECLPVSLQEEGELHWVTELLCSTDKKLTELRDQWDRPEFPPEMLLQLLCLVV
KGLSLMQT
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgtttggagatatatccaaagcagtggtgaagcagctgggcactaaggacctcatctgc
aatgaagatctcatccaggatattaagatgctgactctggtccaacccaaaaggaacaaa
ctcggcatcactaagtacatgatgaaagataaaacactgctcgacctgctggaggagcca
cactttaccccagatgttacagaggaggttctggtggaggattttaagatccagagacgg
aaaggtggcgaaggctctgtagcagcaggagttcatgatgcagctcaaatgaaaatgaat
gcatcgatggacactgtggacggagtgaaggagggcttcactctgaagagaaagacagtg
gacaccaatgagttggaggaaatggaagacaagaagataaagatgaagatggtggacagg
tttaacctacagaaagagaagctgacttgtgtttaccagacggtctacaccaccactcct
ctcacattttattcagaagctacaaagagcggtttactgtcgggaatgtgcagtaaaata
ttccatgtgtcgatggcgagaaacaagaagaaggagatcagctataaagctctcaaaggc
gccaccttcgcttacggcctgatggagatcaagacagcgggaagtcctctgcgaatcaca
gaatttaaacgttatgagaaaggatggaacatcagtttcgacggagatggagactcctgt
aagacgctgaaaaaactgaaggaagaaatatcagcaaaggcacgtcttctgcagccgctg
caaacacttcctcagtcgagccgttgtaatctgctgaaagctctcagtgagatcgtgcat
gacagagatgctctcacgctgctggaggaaacattggatgaagaaatgactgagtgtcca
cagtctcagagtgtctcttcattcatggatcttcttcgtgaagcctcctccagacagaga
gatgctgttcatctgctggtcacagccttggacagtctaccagacggtgctgctgctctt
ctgactgcctgcagtcctgaaacactgacagttctccagcagctggtgagttgtctaatg
gaggacggtcaggccagactcccagagtgtttgcccgtctccctgcaggaggaaggagag
cttcattgggtgactgagcttctctgttcgactgataagaagctgacagagctgagagat
cagtgggacagaccagagttcccaccagagatgctgctgcagcttctgtgtcttgtcgtg
aagggactcagcctgatgcagacttaa
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