Scomber japonicus (chub mackerel): 128380051
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Entry
128380051 CDS
T09718
Symbol
erbin
Name
(RefSeq) erbin isoform X1
KO
K12796
erbb2-interacting protein
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
128380051 (erbin)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_14
LRR_8
LRR_4
PDZ
LRR_LRWD1
PDZ_6
LRR_5
PDZ_2
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
128380051
NCBI-ProteinID:
XP_053195706
LinkDB
All DBs
Position
19:24532316..24594193
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AA seq
1357 aa
AA seq
DB search
MSKRSLFVRLVPCRCLRGEEETVTSLDYSHCSLETVPKEIFSFEKTLQELYLDANQIEEL
PKQLFNCQLLYRLSMPDNDLTVLPAAISNLINLRELDVSKNSIQEFPENIKNCKVLAVVE
ASVNPISKLPEGFTQLLSLTQLYLNDAFLEFLPATFGRLIKLQILELRENQLKMLPKSMH
KLTQLERLDLGSNEFTEVPEVLEQLTGIKELWMDGNRLTFLPGMLGTLKQLVYLDVSKNN
LEMVDEQICGCESLQDLLLSNNALTQLPGSIGSLKKLTALKVDENQLMYLPDSVGGLTAL
DELDCSFNEIEALPSTVGQCVNIRTFAADHNFLTQLPPEMGNWKNATVLFLHSNKIESLP
EEMGDMQKLKVVNLSNNKLRNLPYSFTKLNQMTAMWLSENQSKPLIPLQKEEDPETHKTV
LTNYMFPQQTRNEDYIPNSDSESFNPALWEEQRKHRAQVAFECDEDKDERETPPREGNLK
RYPTPYPDELKNMVKTAQSVAHRLKEDESSDESGKDPRPIEGNHIGVQDVGVKVIEAPCP
NGMASDMERQVSCTQNTSAPESKDTSESYSSQKAPLKSSEASTMNHEDTLEDSEELSDED
EMKVAEMRPPLIEISINQPKVVTLSKDKKDDGKDADSLLDDTVANSNQNNSNCSSPSRMS
DSVSLTTDSSQDNSLCTPEREAKMPFLPKSRQEDENMNQPRDTTPLLHNGNGSETSLQAL
LRTQQSPPEKLGDYDLSMEARLAFIEKGINNGMGDTYTRWDQINMNVSKLPTDNMVELDE
NGSVAQEDLDGKQGFSNDNMDHLQNGNQQVIDYSHCLAFPQTIDAETSAVHVASTGVTAS
SDMSLSRSTEELSPEKRCHPPQVMKAQSVSNIEAGGMKLFAFDGDSDAHEAAAMCRMTGA
GPGPGAQGQSIVRSKSASLLNDQTLQVYPSSSASSSDLLSSSRPPASTSRYQIASSMAMG
IPPPQYNVQYTSSAMPKEGLWAQRTPMPPEHQGYLPPPPHSLANTNFSNRNQAPYLQPQQ
RGPPMGPKPSGDMWVKDRLLTTGGQPRSSTLQRQSSTSSTASVASMGDPRRMQLPEGEYM
TYRDIHTLARGPLAMSQAMQRPLSARTYSIDVPGASRPHSARPQPHELPERTMSVSDFNY
QHNSPSKRPNTRVKSEHSLLDGPGQVGGGRVPTDWRDQVMRHIEAKKMEKDDVFGPQGQQ
SYTMDPHRKVPLMNGQMGPSVRPPQMSQAPMARHPSREQLIDYLMLKVSHQSQGPPRIPQ
DPMQQEIRVKVEKNPELGFSISGGVGGRGNPFRPDDNGIFVTRVQPEGPASKILQPGDKI
LQANGYSFVNIDHGNAVSLLKTFATTVDMIIIREMQA
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcggagcttgtttgttcgtctggtgccatgccgctgcttgcggggtgaggag
gagacggtaacatcgctggactactcccactgcagcctggagactgttcccaaggagatc
tttagctttgagaagaccctgcaggaactctacctcgatgccaaccagatcgaggagctg
cctaaacaactgtttaactgccagttactctatcggctgagcatgcccgataatgacttg
acagtgttgccagcagcaatctcaaacctcatcaatctcagggagcttgatgtcagcaaa
aacagtatccaagagtttccagaaaacatcaagaattgcaaagtcctagctgttgtagaa
gccagcgtgaatcccatatctaagctcccagaaggcttcacccagcttctgagtctgacg
cagctctacctgaacgatgccttcctggagttcttaccggccaccttcggcaggttgatt
aaactacaaatcttggagctgagggagaaccagttaaagatgttgccaaaaagcatgcac
aagctcacacagctggagaggttggacctggggagtaatgagttcactgaagtgcctgag
gtgttggagcagctgactggaatcaaggagctgtggatggacgggaacagactgacgttt
ttacctgggatgctcgggacactaaaacagctggtctacctggacgtgtccaagaataac
ctggagatggtagacgagcagatctgtggctgcgagagtctacaggacctcctgctgtcc
aacaacgccctcacacagctgcccggctccattggctcactgaagaaactgaccgcactg
aaagtggatgagaaccagctgatgtacttgccggactccgtcggagggctcacagctctg
gatgaactggactgcagcttcaacgagatcgaggccttgccctccaccgtcggccagtgc
gtcaacatccgcacctttgctgcagatcacaacttccttacccagcttccccctgaaatg
ggcaactggaagaatgcaactgtgctctttctacattccaacaagatcgagtctttgccc
gaggagatgggagacatgcagaagctcaaggtcgtcaatctgagcaacaacaagttgagg
aatcttccctacagtttcactaaactgaaccaaatgactgctatgtggctctctgaaaat
cagtcaaagcccctgatccctctccagaaagaggaggatcccgagacacacaaaaccgtg
ctgactaactacatgttcccccagcaaaccaggaatgaggactacatacccaactctgac
tcggagagcttcaatccggctctgtgggaggaacaacgcaagcaccgagctcaggtggcg
tttgagtgtgacgaggacaaggatgagagagaaacacccccgagggagggcaacctgaag
cgctaccctacaccatacccagacgagctgaagaacatggtgaaaacagcccagtccgta
gctcacaggctgaaggaggacgagtcgagtgacgagtccgggaaagatccaagaccgatt
gaggggaaccacattggcgtgcaggacgtgggcgttaaggtcatagaagccccttgtccc
aatggcatggcatcagacatggagcgccaagtgtcatgcacccaaaacacctctgcacca
gaatcaaaagacacttcggagtcttacagctctcagaaagccccgctcaaatcttcagag
gcttctacgatgaaccatgaggacacactggaggattctgaggagctgtcagatgaagat
gaaatgaaagtcgcagagatgagaccgcctttaatcgagatctccatcaaccagccgaaa
gtagtgactttaagtaaggacaaaaaagatgatgggaaagacgctgactccttgcttgat
gacacagtggccaacagcaaccagaacaacagtaactgttcgtcgccgtcgcgcatgtcc
gactctgtgtctctgaccacagacagcagtcaggacaactctctgtgcacccccgagaga
gaggcaaagatgcccttcctgccaaaaagccggcaagaagacgagaacatgaaccagccc
agagacaccacccctctcctccataatggtaacggctccgaaacgtcccttcaggccctt
ctgagaacccagcagagcccgccagagaaactgggtgattacgacctgtctatggaagcc
aggctagcattcatcgagaagggaataaacaacggcatgggagacacctacaccaggtgg
gatcagatcaacatgaacgtgtccaagctgccaactgacaacatggtagagctggatgag
aacggttcggtagctcaagaggacttagacggcaagcagggttttagcaatgacaacatg
gaccatttacagaatggaaaccagcaggtcattgactactctcactgcttggcttttccc
cagactattgatgcagagacatctgctgtgcatgtggcctcgacaggcgtgacagccagc
agtgacatgtctctgtctcgtagcacagaggaactgtctccagagaaaaggtgccatccc
ccgcaggtgatgaaggctcagagtgtcagcaacatagaggcggggggcatgaaactgttc
gcctttgatggtgacagcgacgcccacgaagcagcagcaatgtgtaggatgacaggagcc
ggcccggggcccggagctcagggccagagcatagtcaggagcaagtctgcgtcgttgctc
aatgaccagactctccaggtctatcctagctcttctgcatcctcttcagacctgctctct
tcctctaggcctcctgccagcacaagcagatatcaaattgcctccagcatggccatgggc
atccctcccccccagtacaatgtacagtacacaagcagtgccatgccgaaagaagggttg
tgggcccagaggacgcctatgcctccagaacaccaaggctacctccctcctcctccccac
tcattagccaacaccaacttctcaaaccgtaatcaagcaccttacctgcagccccagcag
agggggcctcccatgggtcccaaaccctcgggggacatgtgggttaaggacagacttctc
acgactggtggccagcctcggagcagcactctgcagaggcaaagcagcacctcctccaca
gcctccgtggcctccatgggagacccgaggcgcatgcagctgcccgagggggaatacatg
acgtacagggacatacacaccctcgccaggggcccgctcgcaatgagccaggccatgcag
aggcccctctcagctcgcacttacagcatcgacgtacccggagcttccaggcctcacagc
gccaggcctcagccccacgagcttccagagaggaccatgtctgtcagcgacttcaactac
cagcacaacagccccagcaagaggcccaacaccagagtgaagtctgagcactcgctgctg
gacgggcccggacaggtgggaggaggaagggtgccaactgattggagagaccaggtgatg
cggcatattgaggccaagaaaatggaaaaggatgatgtgtttggtccccaagggcaacag
agctacaccatggacccccacagaaaagtgcctttgatgaacggacagatgggcccttct
gttcgtcctcctcaaatgagccaggcgccgatggcccgccacccatccagagagcagctc
attgattacttgatgctgaaagtctctcatcagtcccaggggcccccacgcatcccgcag
gacccaatgcagcaagagatccgtgtgaaagtggagaagaatccggagctgggtttcagt
atatcaggaggagtaggaggccggggaaacccctttcgtccagatgacaatggtatattt
gtgacacgggtccaacctgaaggaccagcatccaagattcttcagcctggagataaaata
cttcaggcaaatggatacagctttgtgaatatcgatcacgggaacgcagtgtccctcctg
aagacatttgcgaccactgtggatatgattatcattagagaaatgcaagcatag
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integrated database retrieval system