Scomber japonicus (chub mackerel): 128380074
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Entry
128380074 CDS
T09718
Symbol
pax8
Name
(RefSeq) paired box protein Pax-8
KO
K09293
paired box protein 8
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128380074 (pax8)
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
128380074 (pax8)
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Gene cluster
GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_23
HTH_32
HTH_Tnp_IS1
DUF6115
Motif
Other DBs
NCBI-GeneID:
128380074
NCBI-ProteinID:
XP_053195741
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Position
19:17687873..17697107
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AA seq
464 aa
AA seq
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MSHNTGRGHGGLNQLGGMFVNGRPLPEVIRQRIVDMAHQGVRPCDISRQLRVSHGCVSKI
LGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGVCDSDT
VPSVSSINRIIRTKVQQPFNLPLDGKGLSPGQTLIPSSAVTPPESPQSDSLGSTYSISGL
LGIPQPSTEGKRSHDDSDQESCRHSVDSQGSGGVPRKQMRVDHFSAASQHLDCGFDRHHY
PPDSFSSASGSKTEQTLYPLSLINGSLDEAKTSLSTSSSAIGRNLTAHQSYTMVTEPLQS
LPLCLKQEMSPEVTSTSPSPNMAAASNLAFVELQALQKPMPVSNSCSSSSNHFPNAFNSF
SHHAPVYGQFSSQSIISGRDMVSSTLPGYPPHIPSPAQTGYTSSAITGMVAAGADYTGQS
YSHSPYTTYSEAWRFTNSSILGSPYYYSSASRTAPPSAAAYDHL
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgtcccataacaccgggagaggtcatgggggtcttaaccaactaggcggaatgtttgtt
aatggccgtccacttccggaggtgatccggcaacgcattgtggacatggcccaccagggc
gttcggccttgtgacatctcccggcagctccgagtgagtcatggctgcgtcagcaagata
ctgggacgttactacgagacaggcagcatcaagcctggcgtgatcggtggctccaagccc
aaggtggccaccccaaaggttgtggacaagatcgcagagtacaaaaggcagaatcccacc
atgttcgcctgggagatcagggaccggctgctggcggagggagtgtgtgacagtgacacg
gtgcccagcgtgagctccattaacagaataattcgaacaaaagtccagcagccattcaat
ctgcctctggatggaaaaggcctgagtccaggacaaaccttgatccccagttcggcagtc
acccctccagagtctccacagtcagactctttgggctccacctactccatcagcggcttg
ttgggtatcccccaacccagtaccgagggcaagaggagccacgatgacagtgaccaggag
agttgtcgacacagcgtggactctcagggcagcggaggcgtcccgaggaaacagatgaga
gtggatcatttctccgcggcctcgcaacacctggactgcgggtttgatcgtcaccactac
ccaccagactctttcagctccgcctccggtagcaagacagagcagactttgtacccactg
tccctcatcaatggcagcttagatgaggccaagaccagcctctcaacatccagctctgcc
attggacggaatctgacagcacaccagagttacaccatggtgactgagcccctacagtcc
ctgccgctctgtctaaaacaggaaatgtccccagaagtgaccagcacgagcccctcccca
aatatggcggctgcatccaacctggcatttgttgagctgcaggcgctgcagaaacccatg
cctgtcagcaacagctgcagcagcagctccaaccatttccccaatgccttcaactcattc
tcccatcatgcaccagtgtacgggcagttcagcagtcagtctatcatctcagggcgtgac
atggtgagctccaccctgccgggttacccacctcacatcccctcccctgcccagacagga
tacacctcctctgccatcactggcatggtagcagcaggcgcagactacacgggtcagtcc
tacagccactcgccatacaccacctacagtgaagcctggaggttcaccaactccagtata
ctgggttcaccctattattacagctcagcctcccgcaccgctccaccgtctgctgcagcc
tacgaccacctctag
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