Scomber japonicus (chub mackerel): 128380151
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Entry
128380151 CDS
T09718
Symbol
xrcc4
Name
(RefSeq) DNA repair protein XRCC4
KO
K10886
DNA-repair protein XRCC4
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
128380151 (xrcc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sjo03400
]
128380151 (xrcc4)
DNA repair and recombination proteins [BR:
sjo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
128380151 (xrcc4)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
XRCC4_CC
XRCC4
XRCC4_C
XLF
YlqD
PH_4
Motif
Other DBs
NCBI-GeneID:
128380151
NCBI-ProteinID:
XP_053195832
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Position
19:complement(29520838..29558213)
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AA seq
343 aa
AA seq
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MHVSVREICVSSEPDSSYFLRVDWRGRDLGSGFQLLLTDGQEAWRGEVSEAAVSDEAEEL
EMQKEKYVQDLRQALTDTNSSVTYSFSLTPSPPNRCSTLTLAYEKVQKDISFRLGSVSLN
VVPEPAEAVRGLLTHSLERGNTLERHNQALDEENQRLRREQQRITAELKRYAAGKETLEA
ELYSRFVLVLNEKKAKIRSLQETVTDLQEARSSEGKKKGKSKKLDPTSDQEEAAEEDEYG
GSTDEEPEEEQTNPAPAQPTRGSSTPSPLDDSLSDITDVAPCRKRRFRHLGAPEASMATR
PHPQTSQKKKSDSPAAGSKLQTPQRSTDAAAATSAAEDLFDDF
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtgtcggtgcgtgagatctgcgtctcctcggagccagactcctcctacttcctg
cgggtggactggagggggcgggacttaggctcgggcttccagctgctgctgactgacgga
caggaggcttggagaggagaagtgagcgaggcagcagtgagcgatgaagccgaggagctg
gagatgcagaaggagaaatacgtccaggacctccgacaggcgctgaccgacacaaacagc
tccgtcacctacagcttcagcctgacgccttctcctccaaaccgctgctccaccctcaca
ctggcctacgagaaggttcagaaggacatatcgttcaggttgggatctgtttctctgaac
gttgtcccggagccggcggaggcagtgcgagggttactgactcacagtctggagagggga
aatactctggagcgccataaccaggcgctggacgaggagaaccaaagactgagacgagaa
cagcaacgcatcaccgcagaactgaagcgttacgctgctgggaaagaaactctggaggct
gagctttactctcgcttcgttctggtcctgaatgagaagaaagctaaaattcggagtcta
caggagacagtcacagacctgcaggaggcgaggagttctgagggaaagaaaaagggaaag
tcaaagaaattggacccaacatcagatcaggaggaggcggctgaggaggatgagtatgga
gggagtactgacgaggagccagaggaagagcagactaacccagctcccgctcaacctact
cggggctcctctactccgagcccattggacgacagcctgagtgacatcacagacgtggcg
ccttgccgtaaacgccgcttccgtcacctcggagcgcctgaagcctccatggcgacgcgt
ccacatccacagacctcccagaagaagaagagcgactcccctgcagcaggcagtaagcta
cagactccccagcgctccacagatgctgcggcagcgacttcagcagcagaggacctgttt
gacgacttctga
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