Scomber japonicus (chub mackerel): 128380226
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Entry
128380226 CDS
T09718
Name
(RefSeq) nipped-B-like protein B isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
128380226
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sjo03036
]
128380226
Chromosome and associated proteins [BR:
sjo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
128380226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT_EZ
Cnd1
HEAT
Motif
Other DBs
NCBI-GeneID:
128380226
NCBI-ProteinID:
XP_053195931
LinkDB
All DBs
Position
19:complement(16170216..16192973)
Genome browser
AA seq
2717 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTAKSLLYNGRISEEVSSLLVCRDEN
LVTQLAHSLNQVSTEHIELKDNLGNDEPEGDMPMLLQTLLSRNPHIFRDKSVRQQPMVQQ
YKLSQNQVHGSPASNYPQTTVPQSPPGCFTSPQSGSGTRFVPQQNSPIPSPYTPQSPADY
MQYSPPSYSQHQQTQQVTGSLRNIHDNKVSGQLSSNPPNHNARPDSDEDYMNMAHRLGNE
GNDRSTRAASFPVKSPQSVCSPAGSEEAAKWSRPPLIMQSHPPDLPPVAAPDLLLSSSDH
KKRQKERLKEENEQMDKNSLYDIVSSPLKDSARLTLKLSRVRSSDLDESKGLSPSAVEDH
ATDLMNNNQLSRTAHDLSHKLGAEEQANCQQAPVQPNIKETGVISGAVFDDAEIDALADF
ERIERESVSERERWSKEVQDKDKPLKKRKQDSYPQEPGAEAGDGPAAHGGNTGSKLTPKK
TNAASNGASRPALMVSIDLQQAGRVKGQPVVVLEARQLCEDHLRRLKTKTDGKVDKVSEN
RPGIIKQHADNSKKSSTDVQPETLKEKQESRRESKHRPSSKGHSDGKRSDTPRQKHDRHS
DSRHKEEKNHNSHKSHLSQPEAPETMSKAERNSKQVDDIGKDRDKDRDRDKDKDTDRDKD
KDKDKDRDKDKDKDKDRDRDKDRDRDRDKIKDRDRNRVKERDKEKDMDKDKDRDKDKEKV
IDKERDRDKDKGRDKDKNKERDRDRDKDKEKERNKDKDKERDKDKDRDKDKERNKDRDKD
KDKERNKDRDRERIKDRERKHKMLSKENGNRHQHSPDRHAKAESPRVKQDGSRKSTDLNG
RQRTDSSSLQNPQHKEERKSGDDRSNCQTGNKQHPFEINPSVFPSYLLGGRSGSLKNFVI
PKFKRDGKDKDPPIPKKVAEAWSEPRVRLERVSLVENINKGAKPVVVLKKLSVDEVKKII
KESRDTHGSKSRNLSSFEKSGKESNKRRHSMVSKKPKYAESNSDEEDEDNSDNEYVRKKP
KKEHDKSWKQEEKKGSRRSGGHHRQRISDDSDEDTPPPSLSDVARKLKKKEKLKNRKAYD
SKMTLEEKLDSSTFKRFTASVDNIIESLEDADFSGADDDEIPEELLLGKHQLGELGSDSS
KIKAMGIFNKFPSEKLVKILNILEKNIRDSVKLSTLMNHGNDSMDEERLWRDLIIERVTK
SADACLTALNIMTSPRMPKVVYIEDVIERVLQYTKFHLQNSLYPQYDPAYRLDPHGGGSH
NSKAKRAKCSTHKQKVVVTLYNKVCDIVSNMSELLEIQLLTDTTILQVSNLGITPFFVEN
VNELQLCAITLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNTSDSVGESLY
IQMVTALVLQLIQCVVQLPSERDVDDEHNKKVDKDILITNSYETAMRTAQNFLSVFLKKC
GSKQGEEDYRPLFENFVHDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKQTEMALRVAS
LDYLGTVASRLRKDAVTSKMDQKAINRILEHTPGNDETQQLQKALLDYLNENIDKDTSLV
FARKFYIAQWFRDTTTEADKAMKSQNEKDDDWKGHSRDDDSTAEIMQRAEARKKFLRKIK
TSQSHFNSLTSNSDTVDYEDSCLIVRYLASMRPFAQSFDIYLSQILRVLGESAIAVRTKA
MKCLSEVVAVDPSILARLDMQRGVHCRLMDNSTSVREAAVELLGRFVLSRPQLIEQYYDM
LIERILDTGISVRKRVIKILRDICLEQPDFHKITEMCVRMIRRVNDEEGIKKLVNETFQK
LWFTPTPSHDKDALTRKILNITDVVLACKDSGYDWFEQLLQNLLKSEENASYKPAKKACV
QLVDNLVEHILKYEESLADCEDKGVNSGRLVACITTLYLFSKIRPQLMVKHAMTMQPYLT
TKCNTQNDFMVICNVAKILELVIPLMELPSETFLTTLEEDLMKLIIKYGMTVVQHCVSCL
GAVVNKVTHNYKFVWACFNRYYGALAKLKTQHQEDPSSSTLVSNKPTLLRSLFTVGALCR
HFDFDQEEFKGASKIVIKDKVLELLLYFTTNEDEEVQIKAIIGLGFQFIMHPELMFVQDV
KVLYNNTLSDENSLVGLKIQVLKNLQTYLQEEDNRMQEADREWKNQAKQEDLKEMGDISS
GMSSSIMQIYLKQVLESFFHTQSTVRHFSLSVITLTLSQGLIHPVQCVPYLIAMGTDPEP
TMKNKADQQLVEIDKKYSGFIHMKAVAGLKMSHQVQQAIAGSKEPVVRGVRHDDTDAALC
SHLYTLVRGNRQHRRAFLISLLNLFDDSSKTEVNRLLFIADNLACFPYQTQEEPLFIMHH
IDITLSVSGSNLAQSFKESLLKEPVERQKKTKPNKKKKKKKKKQKSHRKKYSSEDDDDDE
DSSSESSSSSSSSDEEDEVVHRRKKTDSDSEMEDEDAIMDRLPENTNPLLDFASASQGIL
LLLVLKQHLKNLYGFSDSKIQKYSPTESAKVYDKAVNRKSKVHFNPRQTLDFLKADLANR
TLSYETKRNIVKQYLDFKVLMEHLDRDEEDEEGEASANARNKAISSLLRGPKPQNHNHNN
HTTVESDDDDSEDEDPPVRKPRKGGDSTEDSGHMNETVEARDVVAICRPKYKDRPQIARV
IQKTKGGYSIHWMSGSYSGPWAEAKKRDGRKKVPWVDTIKESDIIYKKISLTSGQKLTNK
VAHTLRALYAAKEGTKS
NT seq
8154 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtgatatgcctcatgttcccatcactactcttgctggaattgctagcctgaca
gacttgttgaaccagctgcccttgccttcccctctgcctgccaccactgcaaagagtctg
ctctacaatggaaggatctccgaagaggtcagcagcctgctggtgtgtcgggacgagaat
ctggtgactcagctggcacatagccttaaccaggtctcaactgaacacatagagttgaag
gacaacttggggaatgatgaacctgagggtgatatgccaatgcttctccaaaccttgctg
tccagaaacccccatatcttcagggacaaaagtgtaaggcagcagcctatggttcaacag
tataagctgtctcagaatcaggtgcatgggagtccagcatcaaactatccgcaaaccact
gtccctcaaagcccccctggatgctttacatccccgcagtctgggtcaggaactcgattt
gtaccgcagcagaacagccctatacccagtccctatactcctcaaagtcctgctgactac
atgcagtacagtccacccagttactctcaacaccagcagactcagcaagttactggaagt
ctccgaaatatccatgacaacaaagtctctggacagctatcaagtaacccacccaatcat
aacgcaagaccagattctgatgaagactacatgaacatggctcacagactgggaaatgag
ggaaatgatcgttccacgagggcggcctcgtttccagttaaatcaccacagtcggtgtgt
tcccctgctgggagtgaagaggctgcaaaatggtcaagacctcctcttatcatgcagtca
catccgcctgatttaccaccggttgcagcacccgacctgctcctctcctcttctgaccac
aaaaagaggcagaaagaaaggctcaaagaggaaaatgagcagatggacaaaaattccctg
tatgatatcgttagctctccactgaaagactctgcacggctgactttaaaactgtcccga
gtgaggtcttcggacttggatgaatccaaagggctttctcctagtgcagttgaggaccat
gcaactgatttgatgaataataatcagttgtcaaggactgcccatgacttgtcacacaag
ttgggtgccgaggagcaggcaaactgtcagcaggctcctgttcagccaaacatcaaggag
actggagtcatcagtggggctgtgttcgatgacgccgagatagacgcactggcagacttt
gagagaatagaacgcgagtcagtcagtgagagagagcgatggtctaaagaagtccaggat
aaagacaagccactgaagaaacggaagcaagactcgtatcctcaggaacccggagctgag
gctggcgacgggcctgccgcacacgggggcaacactggcagcaagttgacacccaagaag
acgaatgctgcgagtaacggtgctagccggcctgctttaatggtcagtattgatctgcag
caagccggcagagtgaaaggacagcctgtggtagtcttggaagcaaggcagctctgcgag
gaccacctgcggcgcctaaagacaaagacagacggaaaggtggataaagttagtgagaac
agacccggcatcatcaaacagcatgctgacaactccaagaagtccagcacagacgtccaa
ccagaaacccttaaagagaagcaggaaagccgacgggaatctaagcaccgaccaagcagc
aagggacactcagatggcaaacgatcagacacaccacggcagaaacacgacagacattca
gactcgcggcacaaagaggagaagaaccacaacagtcacaaatcccatctcagccaacct
gaggctcctgaaaccatgagcaaggcagagcgtaattccaaacaggtagatgacataggt
aaggatagagataaggacagagatcgagataaggataaggacacagacagagataaggat
aaggataaggacaaggaccgagataaggataaggataaggacaaggatcgagatcgggat
aaggacagggatagagatagagataagattaaggacagggatagaaatagggttaaggag
agagataaagaaaaggatatggataaggataaggatagagataaagataaagaaaaggtt
attgataaggaaagagatagggataaggacaaaggtagagataaagataagaacaaggaa
agagatagggatagggataaggacaaagaaaaagagaggaataaagacaaagataaggaa
agggataaggacaaagatagagataaagataaagagaggaataaggacagagataaggac
aaagataaagagaggaataaggacagagatagagaaagaatcaaagatagggaaaggaaa
cacaagatgctgtcaaaagaaaacggcaacagacaccaacattctcctgaccggcatgct
aaagccgaaagccctagagtgaaacaagacggaagcagaaaatccactgacctcaatggt
cgacagaggacagatagttccagccttcaaaatccccaacacaaggaagagaggaaaagc
ggggatgaccgcagtaattgccaaactgggaataaacagcatccctttgagataaatcct
agtgtgttcccctcatacctgctgggtggaaggtcaggaagtctgaagaactttgtgatt
ccaaaatttaaacgggatggaaaagacaaagatcccccaattcccaaaaaagtggcggag
gcttggagcgaaccccgggtcagactggagagagtgtcgctggtagagaacattaacaaa
ggagctaagcctgttgttgtgctcaagaaactaagtgtcgatgaggtaaaaaagatcatt
aaggaaagcagggatacacacggctccaaatccaggaacttgtcctcttttgaaaaatca
gggaaagagtcaaacaagcgcaggcacagtatggtcagtaagaaacccaagtacgctgag
tccaactccgatgaagaggatgaagacaactctgacaatgagtatgtaaggaaaaagccc
aagaaagaacacgacaagtcatggaaacaggaggagaagaaaggttctcgccggtcgggt
ggtcatcaccgccaaaggatctcagacgactcagatgaagacactccacctccaagccta
agtgatgttgccagaaaactgaagaaaaaggagaaactaaaaaacagaaaggcgtacgac
tccaagatgacactagaggaaaagttggactcttccacatttaagagattcacagccagc
gtggacaacattattgaaagtcttgaagatgcagacttcagtggtgcagatgatgatgag
atacctgaagaactcctgcttggaaaacaccagttgggcgagctaggcagcgactcctct
aagattaaagctatgggcatctttaacaagtttccatctgagaaactggtgaaaattctg
aatatcctggagaagaacattcgggacagtgtcaaactttccacattaatgaatcatggt
aatgattccatggatgaggagcggttgtggcgtgacctgatcatagagcgggtgacaaag
tctgctgatgcctgcctgactgcacttaacatcatgacatctccacgcatgcccaaggtt
gtttatatagaggatgtgattgagagggtgctgcagtataccaagttccatctgcagaac
tctttgtaccctcagtatgacccggcctacagactggatccacacggaggtggcagtcat
aactcaaaggccaagagagcaaagtgttctacccataagcagaaggtggttgtcacactt
tacaacaaagtgtgtgacattgtcagcaacatgtcggagctcctggagatccagctgtta
actgacacgaccattctacaagtgtccaatcttggtattacaccgttttttgtggagaat
gtcaatgaactgcaactgtgtgccatcacacttgtgacagcagtgttctctcgttacgag
aagcacaggcagctcattcttgaagaaatcttcacctccctggctagactgcctactagc
aaacgcagcctcaggaactttaggctaaacaccagtgattcggttggagagtccttgtat
attcagatggtcacagctctggttcttcagctcatccagtgtgtggtacagctcccctct
gagagggacgtagatgatgaacataataagaaggtggacaaagatatcctcatcacaaat
tcttatgaaactgccatgaggacggctcagaacttcctatcagtgtttctcaagaaatgt
ggcagtaagcaaggagaggaggactacagacccctgtttgagaactttgttcacgacctg
ctgtcaacagtcaacaagcctgagtggcctgcagctgaactgctgctcagtttactcggc
cggcttttggtgcaccagttcagtaacaagcagacagaaatggcgctcagggtggcatca
ctggactacctcggcactgttgcttctcgcctgcgtaaagatgctgtcacaagcaagatg
gaccaaaaggccattaaccgcatcctcgaacatactccaggcaatgatgagacccaacaa
ctccagaaagccttgctagactatctaaatgaaaacattgataaagacacatctttagtg
tttgcaaggaagttttacatcgctcagtggttcagggacacaacaactgaggcagacaaa
gcgatgaagtctcaaaatgagaaagacgatgattggaaaggtcattccagggatgatgat
tcaactgctgaaattatgcagagggctgaagcacgaaagaaattcctccgcaagataaag
acttcacaatcacatttcaattctctgacgtcaaactctgacacagtagactatgaggac
tcctgtctgattgtcagatatctggcctctatgaggccatttgcacagagctttgatatt
tatttatcacagattctgagagttctgggtgagagtgctattgcagtcagaactaaagcc
atgaagtgtctgtctgaggtagtggcggtggatccaagtattctagcacggttggatatg
cagcgtggggttcattgtcgcctcatggacaactccaccagtgtgcgagaagcagctgta
gagctcctcggccgttttgtgctaagtcgacctcagctcattgagcagtactatgacatg
ctcattgaaaggatattggacacaggtattagtgtgcggaagagagtcattaagatccta
cgggatatttgcctggagcagccagacttccacaagatcactgagatgtgtgtcaggatg
atccgaagggtcaatgatgaggaagggattaagaaactggtgaatgagacattccagaaa
ctctggttcacccccacgcccagtcatgacaaagatgccctgaccagaaagatcctgaac
atcacagatgtggtgttggcatgtaaagattcaggctatgactggtttgagcagcttctc
caaaatctactgaagtcagaagagaacgcttcgtacaaacctgcaaagaaagcttgcgtt
cagttggtggacaatctagttgaacacatactgaaatatgaggagtctctcgcagactgt
gaggacaaaggggtcaactcaggtcgcctggtagcatgcatcaccactctatacctgttc
agcaagatcagaccacagttaatggtcaaacatgccatgactatgcagccctacttgacc
accaagtgcaatactcagaatgacttcatggtgatatgtaacgtggccaagatcctggag
ctggtcatacctctgatggagcttccaagcgagactttcctcaccacccttgaagaagat
ctgatgaagctcatcatcaaatatggcatgacggttgtccaacactgtgtaagctgtctt
ggtgctgttgtgaacaaggtcacacataactacaagtttgtttgggcttgtttcaatcgt
tactacggagctctggcaaaactcaagacccagcaccaagaggatcccagcagctccact
ctggtatctaacaaacccactctgctgcgctcactgtttactgtgggggctctgtgtcga
cactttgattttgaccaagaggagttcaagggcgccagcaagattgtcatcaaggacaaa
gtgttggagcttctgctgtacttcaccactaatgaagatgaggaggtccagatcaaggcc
atcataggtctaggcttccagttcatcatgcacccagagctcatgtttgtgcaggatgtg
aaggttctctataacaataccctgtcagatgaaaacagtttggttggtctgaagatccag
gtgttaaaaaacctgcagacctacctacaggaggaggacaatcgaatgcaggaggctgac
cgtgaatggaagaaccaagctaagcaagaggatctgaaggaaatgggggacatctcatca
ggcatgagcagttctataatgcagatctacctgaagcaggtgctggagtccttcttccac
acgcagtccactgtgcggcacttttcacttagtgtcattactctgactctcagccagggc
ctcatccatcctgtacagtgtgtgccctacttgattgccatgggaacagaccccgagcca
accatgaagaacaaggctgatcaacagctggtggagattgacaagaaatattccggcttc
atccatatgaaagccgtagcagggttgaagatgtctcatcaggtacaacaggccatagct
ggcagcaaagagccagtggtccgaggtgttcggcacgatgacacagatgcggccctctgc
tctcatctttacactttggtccgcgggaaccgacaacatagacgggctttcctcatttcc
ctgctcaacctgtttgatgatagctctaaaacagaggtgaacaggctgctgttcatagca
gacaacttggcctgcttcccataccagacccaggaggaacctcttttcatcatgcaccat
atagacattactctgtctgtctctggtagcaatctggcccaatctttcaaggagtcttta
ctgaaagagcctgttgagcgtcaaaagaagacgaagccgaataagaagaagaagaagaaa
aagaagaagcagaagtctcacaggaagaaatacagctctgaggatgatgatgacgacgag
gacagcagtagtgaatccagcagcagcagcagcagcagcgatgaggaagatgaggtggtc
cacaggcgaaagaaaacagattctgactccgaaatggaagatgaagatgcaattatggac
cgtctacctgaaaacacaaaccctctgctggacttcgccagtgcttctcagggtatcttg
ctgctgcttgtgctcaaacaacatctgaagaatctgtatggcttctcagacagcaaaatc
cagaagtactcaccaacagagtctgccaaagtgtatgacaaggcagtgaacaggaaatct
aaggtgcatttcaaccctcgacagacgctggatttcctgaaggctgatttagccaacagg
actctcagctacgagaccaagaggaatattgtgaaacagtacttggatttcaaggtactg
atggagcacttggatcgcgatgaagaggacgaggagggcgaagcaagtgccaatgctaga
aataaagccatttcttcgctactcaggggcccaaaaccccagaaccacaaccacaataac
catactacagtggagtcagatgatgacgacagtgaggatgaagatcctcccgtgcggaaa
ccaaggaaaggcggggattccacagaggattcaggtcacatgaatgagacagtggaagcc
agggacgtcgttgccatctgccgccccaaatacaaagacagaccacagattgctagggtc
atccagaagaccaaaggtggctacagtatacactggatgtctggaagttactctgggccc
tgggctgaggcaaagaaacgggatggtcgcaaaaaggtgccttgggttgatacgatcaag
gagtcggacattatttacaagaaaatctccttgacaagtggacaaaagcttacgaacaaa
gtggcacatacgttacgggcgctatatgctgccaaggaggggactaagagttaa
DBGET
integrated database retrieval system
