Scomber japonicus (chub mackerel): 128380232
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Entry
128380232 CDS
T09718
Symbol
lamc3
Name
(RefSeq) laminin subunit gamma-3
KO
K06247
laminin, gamma 3
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04510
Focal adhesion
sjo04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128380232 (lamc3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128380232 (lamc3)
BRITE hierarchy
Motif
Pfam:
Laminin_N
Laminin_EGF
Laminin_B
Motif
Other DBs
NCBI-GeneID:
128380232
NCBI-ProteinID:
XP_053195940
LinkDB
All DBs
Position
19:complement(22393185..22500602)
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AA seq
1640 aa
AA seq
DB search
MDTSFAVSSYLLALLLSLHLHFQPLVWAAMDSCYDEEGTMSRCLPRFENIAFNRTVEVSN
VCGSPAEEYCMHTGSTRSCHYCDASDPELSHNASLLTDFNRNEEPTWWQSQSMYFNIQHP
NSVNLTLRLGKAFEITYIRLKFYTIRPDSFAIYKRTVEDGPWLPYQYYSSSCRKTYGKDE
KAFIRPGDDERIALCTDEFSDISPLSGGNVAFSTLEGRPSAYNFDQSLVLQEWVTATDLL
ISLDKLNTFGDEVFKDTKVLRSYFYAISDFSVGGRCKCNGHASECIEGERGGLVCVCQHH
TVGVDCQKCHPFYQDRPWARATGDSANECLKCNCSGRSEECVFDMEQYRSTGSGGRCVNC
RDNTDGPHCERCRENHYRRSPEEPCLPCNCNINASVSLQCDEGGKCTCQAGVTGEKCDTC
QAGFHSLGPGGCRTCECNPSGSVGDCSPLDGRCHCKPNVEGQNCGRCKPGFFNFQQVNPA
GCQPCFCSGHSLACVSSNNYAAFNITSDFMEEQDDWVGEFSGGQEYPLLWKEGEVYLLPL
SEEDTGFYKAPEKFLGRQVYSYGQLLSITFTSETPELLPNHVTVFLQGSGITVSADLSPQ
PVLDYDLGLTPRNYWIVRLHENEMRFKPQLSAFEFQRLLYNLTAIRISNAGGHNYTSQLA
GVSLTSAFSSSGPASPPAPWVEYCDCPLGFTGQFCEQCASGFTREIPGRGPFSTCVPCNC
HHHGTCHPETGVCECSDFTTGLTCEHCLDGYYGNPLIGTPGDCQPCPCPDRTSCAQIAHT
GQVVCTNCPTGQTGVRCQMCEDGYYGDPLGRSGAVQPCVRCDCNGNVDFNALGICDHITG
RCLKCLGNTEGDHCQHCQRGFYGDALNQTAAQKCKPCDCSPAGTYEYVNECHPQTGSCRC
LSHVTGRDCSYCEVGFFNLQHGVGCERCKCSPIGSSSIACHPITGQCVCRAGVEGRLCES
CRVGFFGFSSRGCRACNCDPMGSISMQCHSNGTCHCREGFVGYKCDKCELNYFHNIITHQ
CEECPVCYGLVKKQAEKLRTRLQDLEKLLAHFDCRGRFGKQHHLLKYHMGKLYGHEHQGE
DTLPNALEDFLAFQEAREAFIKQFSLLEASTGTLLAQLDGITSTLNCSISMRKEEGMDRR
KDEGSSDVCQTFTETVLVIRASQTRLKQATLDLDNMIIPFELASGSNKWNIMVNESQVLT
KSHRETADHIEAIASRAVKASEQTFSFLMDLLQDNSTEEYIRKLTEQIEQMQQQKENLTS
QVNETVAQQLALEEEAASLELALGNITSSLHQLALTDASPSLEPDQIQLNQTHPPSHVTE
WGANLLKETEELDRHIQSKDDRIGKTRDEMEPLIQTLNKSLETMNDMAELQARAEGARAM
ALSSVVSGKEVESETITLHRELENMVKEWTTHRQNQTKHAMKKEKLIQEKVLPLVKKKVS
QSDKTLKPALENSSLSSNISKEAEHTANAVAKETKDILTQAKHTKTSFGHLNSDIDSVFH
QLAEQEKMLTNGTNSQITSEPEVTLTNIKEHMEAAKLQLESYSVTLNELIGKIDGNVPLE
RFDRILNETARRLSMLRMSVDSPALGSKIQNLRSASKEQKNQLSLAEKEIQEIREERDSL
RDIALNLPKSCPQATGTGKG
NT seq
4923 nt
NT seq
+upstream
nt +downstream
nt
atggatacatcatttgcagtgagctcttatctcctggcccttctactctctcttcatcta
cacttccagcctcttgtttgggccgcaatggactcctgttatgatgaagagggcactatg
agtcgttgcttgcccaggtttgagaatattgccttcaatcgaactgtggaggtatcaaat
gtgtgtggttccccagctgaggagtattgcatgcatacaggctcgacacgctcatgccac
tactgtgatgcgtcagacccagaactgagccacaatgccagcctcctgacagacttcaac
aggaatgaggagcccacgtggtggcagagccagtccatgtactttaatatccagcacccc
aattctgtcaacctcacactccgcctggggaaggcctttgagataacctacatccgattg
aaattctacaccattcggccggacagcttcgccatctacaagcgtacggtggaggacggg
ccctggttgccgtaccagtattacagcagctcttgtaggaagacctatgggaaggatgag
aaggctttcatccgcccaggagatgatgagagaatcgctttatgtacagatgagttcagt
gatatctcccccctcagtggaggaaacgtggctttttccaccctagagggacgtcccagt
gcatacaactttgaccaaagcctggtgttgcaggaatgggtgacagccacagacctgctc
atctctttggacaagcttaacacctttggagacgaggtcttcaaggacactaaagtgttg
cgctcgtacttttacgccatctcggatttctctgtgggtggcagatgcaagtgtaatggt
catgccagtgagtgtattgagggggaacgtggcggcctggtctgtgtctgccaacatcac
acagtaggagttgactgccagaaatgtcaccccttttaccaggacagaccctgggccagg
gccactggggactccgccaacgagtgtttgaagtgcaactgcagtgggagatcagaggag
tgtgtgttcgacatggagcagtaccggagcactggcagtggggggcgctgtgtgaactgc
agggacaacactgatgggccccactgtgagagatgcagagagaaccactacaggagatca
cctgaagagccttgcctgccctgcaactgcaatatcaatgcatcagtgagtctacagtgt
gatgaaggaggaaagtgtacgtgtcaagccggcgtgacaggggagaagtgtgacacgtgt
caggctggttttcactcgcttggccccggtggctgcaggacatgcgagtgtaaccccagc
gggagtgtgggcgactgttctcctctggatggacgctgtcactgtaagccaaacgtggag
ggacagaactgtggcagatgcaaaccaggttttttcaactttcaacaagtaaacccagca
ggctgccagccgtgtttctgctctggccactctctggcctgcgtctcatccaataactat
gcagctttcaacatcacttctgacttcatggaagaacaggatgactgggtgggagagttc
tctggagggcaggagtaccccctgctgtggaaggaaggagaagtctacctgctgcctctc
tctgaggaagacactggcttctacaaagcccctgagaaattcctgggccgccaagtctac
agctatggccagctcctctccatcaccttcacctcggagacccctgagctgctccccaac
cacgtcactgtgttcctccaaggctctggaatcaccgtgtcagccgacctttcaccccag
ccggtgctagactatgacctaggcctcacaccgaggaactactggattgtcaggcttcat
gaaaatgagatgagatttaaacctcagttgtctgcctttgagttccagcgtctcctttac
aacctgacagccatcagaatcagcaatgcaggaggacacaactacacatcgcagctcgca
ggagtaagtctgacctcagcttttagctcctctggaccagcaagcccgcctgccccatgg
gtggaatactgtgactgtcccctgggttttacaggccagttctgtgagcagtgtgctagt
ggattcaccagggaaatccctggcagagggcctttctcaacatgcgtgccatgcaattgc
catcaccatggaacctgtcatccagagacaggtgtgtgcgagtgttcagacttcaccact
gggctgacctgtgagcactgcctggatggttactatggcaacccattgattggcacacca
ggtgattgtcaaccttgcccttgtccggaccgtaccagctgtgcccaaattgcacataca
ggacaggtggtctgtaccaactgccctacaggacagacaggggtccgctgtcagatgtgt
gaggacggttactatggtgacccactgggaagatctggggcagtacagccctgtgttaga
tgcgactgtaatggcaacgtggactttaacgctctgggaatatgtgaccacatcactggg
cgatgtttgaaatgcctgggaaacacagagggcgaccactgtcaacactgccaacgaggt
ttctacggcgatgccctgaaccagactgctgcccagaagtgcaaaccgtgcgactgcagt
cctgccggaacctacgagtatgtaaatgaatgccaccctcagactggaagttgccgatgc
ctcagtcacgtgaccggacgggattgcagttactgtgaagttggcttcttcaacctccaa
cacggtgtaggatgtgagaggtgcaagtgtagtccaattggctcatcatccatcgcgtgt
catccaatcacaggccagtgtgtgtgtcgtgcaggagtggaggggagactgtgtgagtct
tgccgtgtgggcttctttggattctcctcacgaggttgcagagcctgtaactgtgaccct
atgggctccatttccatgcagtgtcacagtaatggtacctgccactgtcgtgagggcttt
gtgggttacaagtgtgacaaatgtgagttgaactacttccacaacataatcactcaccag
tgtgaggaatgcccagtttgctatggccttgtcaagaagcaggcagaaaagctgaggact
cgtctgcaggatttggagaagctcctggctcactttgattgccgaggtagatttgggaag
cagcaccacctgctgaagtatcacatgggcaagctttatgggcatgagcaccagggggag
gatactctaccaaatgctctggaggattttctggccttccaagaggcacgggaggccttc
ataaaacaattttccttgctggaagcttctacaggcacactcttagcccagctggatggc
attacatctactttgaactgcagcatcagcatgagaaaggaagaggggatggataggagg
aaggatgaggggagcagtgatgtttgtcaaaccttcacagagactgtgctcgtgatcaga
gcatctcagacacggctaaagcaggcaacactggacctggacaacatgatcattcctttt
gagttggcttcaggatctaacaaatggaacatcatggtcaacgagtcacaggtgctaacg
aaaagtcacagagaaacggcggaccacattgaggccatagccagcagggcggtaaaagcc
tcagagcagaccttcagtttcctgatggatctactgcaggacaactccaccgaggagtac
atcaggaaactaacggagcaaatagaacaaatgcagcagcagaaggagaacctgacgtcg
caggtgaatgaaaccgttgcccaacagctggcactggaggaggaagctgctagtttggaa
cttgccctgggtaacatcacatcatctttacatcagctggctctgacagatgccagccca
tcactagagcctgaccaaatacagctaaaccaaacacatccccccagccatgtaacagag
tggggcgcaaacttgctaaaagagacagaagagctggaccggcacattcagagcaaagac
gatcgcattggcaaaaccagagatgagatggagcctctaatacagactctcaataagagc
ctggagactatgaatgacatggctgagctgcaagctcgcgctgaaggggcaagggccatg
gctttgtcgtctgtggtgtcagggaaggaggtggaatcagagaccatcaccctgcacaga
gaactggaaaacatggtgaaggagtggaccacccatcggcagaaccagacaaagcatgcg
atgaagaaggagaaattaattcaggaaaaggttctacctcttgtgaagaaaaaggtctca
cagagtgataagacactgaaaccagctctggagaactccagcctctccagcaatatctcg
aaggaggcagaacacactgcaaatgctgtagcaaaggaaacaaaagacattctgactcag
gccaagcatacaaagacttcatttggtcacctgaactccgatatagactctgttttccat
cagttggctgagcaggagaagatgctaactaacggaacaaactcccagatcacctcagag
cctgaggtgaccctgacaaacataaaggaacacatggaggcagccaagctccagttggag
tcctattccgtgacgctaaatgagctaattggcaagatcgatgggaatgtgcctctggag
cgcttcgaccggatcctgaacgagacagcgcgccgtctgagcatgctccgaatgtctgtg
gacagcccagctctgggctccaaaatccaaaacctgcgttcggcttctaaggagcaaaag
aaccagctgtcccttgctgaaaaggagatacaggagatcagggaagagagagacagcctc
agggacattgctttaaacctgcctaagtcctgcccccaggccacaggaacaggcaaaggc
tag
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integrated database retrieval system