Scomber japonicus (chub mackerel): 128380257
Help
Entry
128380257 CDS
T09718
Symbol
chsy3
Name
(RefSeq) chondroitin sulfate synthase 3
KO
K13499
chondroitin sulfate synthase [EC:
2.4.1.175
2.4.1.226
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
sjo01100
Metabolic pathways
Module
sjo_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
128380257 (chsy3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sjo01003
]
128380257 (chsy3)
Enzymes [BR:
sjo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
128380257 (chsy3)
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
128380257 (chsy3)
Glycosyltransferases [BR:
sjo01003
]
Glycan extension
O-Glycan
128380257 (chsy3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Glyco_transf_7C
Glyco_tranf_2_2
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
128380257
NCBI-ProteinID:
XP_053195976
LinkDB
All DBs
Position
19:3105106..3110685
Genome browser
AA seq
810 aa
AA seq
DB search
MALKSRRPWTTVIFGVFLGFTASSWLIVPQVLESKRKKSPVCAYYGDSAVRKVPEILGNP
AAVKHEDGPQRSEEEERMLNAGNSSGDNSRPITRPKHFLFVGVMTAKKYLGTRAVAAYNT
WSHSIPGKVEFFSSEGSGTIRLPVPIPVVSLAGVDDSYPPQKKSFMMLKYIHDHYLDKYE
WFMRADDDVYIRGEKLELFLRSLNSSKPLYLGQTGLGMAEELGRLALEPGENFCMGGPGM
IFSREVLRRMVPHISTCLREMYTTHEDVEVGRCVRRFGGTQCVWSYEMQQLFYENYEQNK
KGFIEELHSSKIHNAITLHPNKRPAYQYRLHSFMLSREISRLRYHTIMLHREGLTMTQLS
DTEVLWEDQQLGAPPSYMRYQPSERNDVIEWDFLTRRHIYSAVENKMARQNLGNSLRTAL
EDIILQVMEMINENSKARGRVIDFKEIQYGYYRVDPMHGAEYILDLLLLYKKHKGRKITV
PVRRHAYLQQSFSRPFFTEAEELDVAELVAAINSESQSLSFLSNSLKFLSPFQFYESTRE
MWEQSPRKVNILVPLSGRYETFVRFMENFEKVCLIPKQNVKLTVILVNNESNLNRGKHAQ
LIKDYYKKYPKADLSVIPMTGNFSRGLALELGSSQLDNDTLLFFCDVDLIFSGDALQRCR
DNTVQGHQVYFPIVFSQYNPKIVYGEKGPRENKFVLTKKGGFWRDYGFGITCVFKSDLLK
AGGFDTSILGWGLEDVDLFTKVINSGLKVLRSQEPGIVHIYHPVHCNSSLEQKQHKMCLG
SKASTYASSMQLAEMWLEKHIEVGYNRTSS
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggctctcaaatcgaggagaccgtggacgaccgtgattttcggcgtctttctcgggttc
actgcgtcgtcttggctcattgttcctcaggttctggaaagtaaaaggaagaaatctcca
gtgtgtgcttactacggtgactctgccgtccgcaaagtacctgagatcctcgggaatccc
gcggctgtaaaacatgaggacggcccgcagcggagtgaggaggaagagcggatgttgaat
gccgggaacagtagcggagataacagcagacctataacccggcccaagcatttcctcttt
gtcggtgtgatgacagctaaaaagtacctggggactcgcgcagtggccgcgtacaacaca
tggtcgcattccataccggggaaggtggagtttttctccagcgagggctctggcaccatc
cgcctgcccgtccccatccccgtggtgtctctggcaggtgtagacgactcctacccgcca
cagaagaagtcattcatgatgctgaagtacatccacgaccactacctggataaatatgag
tggttcatgcgggcagatgacgatgtttatataagaggtgagaagctggagttgttcctg
cggtcactgaacagcagtaagcctctttacctgggccagacaggccttggcatggcggag
gagttgggtaggctggctctagaacctggagagaacttctgcatgggcggtccagggatg
atcttcagcagagaggtgctccgcaggatggtgcctcacatcagcacctgtctcagggag
atgtacaccacccatgaggatgtggaagtgggccgctgtgtgaggcgctttggcggaaca
caatgtgtgtggtcatatgagatgcagcagctcttctatgagaactatgaacaaaacaag
aaaggtttcattgaagaacttcacagtagcaagatccacaatgccattacgctccaccca
aacaaaaggcctgcctaccagtaccgactccacagcttcatgctgagccgtgagatctca
aggctccgttaccacaccattatgctccaccgcgaaggcctgactatgactcagctcagt
gatacagaggtgctatgggaggaccaacagctgggagccccaccttcctacatgcgctat
cagcccagtgagagaaatgatgtcattgagtgggatttcctgactcgccgccatatttat
tctgctgtagagaacaagatggcccgccaaaaccttgggaactcactgcggactgcacta
gaagacattatactccaggtcatggaaatgattaatgaaaattctaaagcacgtggccgc
gtaattgactttaaagagatccagtatggctactacagagtggatccaatgcatggagca
gagtacatcttagacttactgcttctgtacaagaaacataagggacgtaaaataacggtg
cctgtgaggcggcacgcttaccttcagcagtcctttagccgacccttctttaccgaagct
gaagagttagatgtggctgaactcgtggctgccatcaattctgaatcccaatccctgtca
ttcctatccaactctctgaagttcttatcacctttccagttctatgagtcaaccagggaa
atgtgggagcaaagcccgaggaaggtgaacatcctcgtcccactgtccggtcgctatgaa
acctttgtccgctttatggagaactttgagaaagtgtgtttgatacccaaacaaaatgta
aagctcactgtcattctggtgaacaatgagagtaatctgaacagaggaaaacacgctcag
ttaatcaaagactactacaagaagtatcccaaagccgacctgtccgtgattcccatgaca
ggaaacttttcacgagggcttgctttagagctgggctcctcacagctcgataatgacacg
ctactcttcttctgcgacgtcgatctcatctttagtggtgacgccttgcaacgctgcaga
gacaatactgtgcaaggacaccaggtctatttcccaattgtgtttagtcagtacaacccc
aagatagtgtatggtgagaagggcccaagagaaaacaaatttgtgctgaccaagaaaggt
ggtttctggcgagattatggctttggaatcacctgtgttttcaagagtgacctgctaaaa
gccggaggattcgacacgtcaatcctagggtggggactggaagatgtcgacttgttcact
aaagtcattaattctggtttaaaagtgttacgcagtcaagaacctggaattgttcatatt
tatcaccctgtccactgtaactctagtcttgagcagaagcaacacaaaatgtgccttggt
tcaaaagcaagtacatacgcatcgtcaatgcagttagcagagatgtggctggagaaacac
atagaggtcggctataacagaacttcatcctga
DBGET
integrated database retrieval system
