Scomber japonicus (chub mackerel): 128380295
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Entry
128380295 CDS
T09718
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein D0-like isoform X1
KO
K13044
heterogeneous nuclear ribonucleoprotein A/B/D
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sjo03041
]
128380295
Spliceosome [BR:
sjo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
128380295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
CBFNT
RRM_PARP14_1
RRM_3
Nup35_RRM_2
NID
RBD_AKAP-17A
Keratin_2_head
Motif
Other DBs
NCBI-GeneID:
128380295
NCBI-ProteinID:
XP_053196032
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All DBs
Position
19:complement(25896260..25903721)
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AA seq
316 aa
AA seq
DB search
MSDDYEFSEDPTPTRMEEDGEANSDDPMSAAGDCGPTGGEAEGSRIDASKNEEDEGKMFV
GGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPMTGRSRGFGFVLFKDAESVDKVATQKEHK
LNGKVIDPKKAKAMKSKEPVKKIFVGGLSPDTPEEKVREYFGAFGEVESIELPMENKTNK
RRGFCFITFKEEDPVKTIMEKKYHNIGLSKCEIKVAMSKEQYQQQQYWGGRGGYSSRSRG
RGGGPNQNWNQGYGNYWNQGYGNYGYGNQGYGGYGGYDYSGYNNYYGYGDDSIVDQSAGY
GKSPRRGGHTNSYKPY
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatgattatgaattcagtgaagacccgaccccgactaggatggaggaggacgga
gaggccaacagcgacgacccgatgtctgcagccggggactgcggcccaacggggggcgag
gccgagggctcgaggatagacgccagtaagaatgaagaagatgaagggaaaatgtttgtt
ggaggtctcagttgggacacgactaagaaggacctgaaagattacttctctaagtttggg
gaggttgtagactgcactttaaaactggacccgatgaccggccgctccaggggcttcggc
ttcgtgctcttcaaagacgccgaaagtgttgacaaggttgccacacagaaggagcacaaa
ctcaacgggaaggtcattgaccccaaaaaagccaaggccatgaagagcaaggagcctgta
aagaagatctttgtcggcggtctctctccagacactcctgaagagaaagtcagagagtac
tttggtgccttcggagaggtggagtctattgagcttcccatggagaacaaaacaaacaaa
agaagaggtttctgcttcatcacattcaaagaggaagacccagtcaagacgatcatggag
aagaagtaccacaacatcggactaagcaaatgtgaaataaaggtggcgatgtctaaggag
cagtaccagcagcagcagtactggggaggccgaggcggatactcgtccaggtctcgaggt
cgaggcggcggtcccaatcagaattggaaccagggttacggcaactactggaatcaaggc
tatggaaattatggctacggtaatcaaggctacggaggatatggtggctatgattactct
gggtacaacaactattacggctatggtgacgacagcattgtagatcaatctgctggatac
ggcaagtcgccacgacgtggtggtcacaccaacagttacaagccgtattaa
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