Scomber japonicus (chub mackerel): 128380301
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Entry
128380301 CDS
T09718
Symbol
hnrpkl
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein K, like isoform X1
KO
K12886
heterogeneous nuclear ribonucleoprotein K
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128380301 (hnrpkl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sjo03041
]
128380301 (hnrpkl)
Spliceosome [BR:
sjo03041
]
Common components
Common spliceosomal components
hnRNP proteins
128380301 (hnrpkl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
ROKNT
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
KH_Vigilin
MOEP19
DJ-1_PfpI
Glyco_tran_WecG
Motif
Other DBs
NCBI-GeneID:
128380301
NCBI-ProteinID:
XP_053196047
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Position
19:21017628..21030788
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AA seq
431 aa
AA seq
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MEVNIEQQDEDITFSNTDTNGKRPAEDMDEEQAFKRSRNTDEMVELRVLLQSKNAGAVIG
KGGKNIKALRTDYNASVSVPDSSGPERILSVNASIDTIGEILLKIIPTLEEYQHYSGIDF
DCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLVGGKPERVI
ECIKVILELVSEAPIKGRAQPYDPNFYDETYDYGGFTMLFEERGRRPIGGFPIRVRGGFE
RMPPVRGNRPMPPSRRDYDDMSPRRGPPPPLSRGGRGGSRARNLPLPLPPPPRGGGDRFS
HGSYHGSMDDRPSDRRGRGGDRYDSMSGGGYDNNSSWDHFQSGGRGSYSDIGGPIITTQV
TIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQ
NSVKQYSGRFF
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgaatattgaacaacaggacgaagacatcacattcagcaatactgacacgaat
ggtaaacggccagctgaggacatggacgaggaacaggcattcaaacgttctcgcaacaca
gacgagatggtggagctccgtgtgctgcttcagagcaaaaatgctggcgcagtcattgga
aagggtggcaagaacataaaagccctacgtacagattacaatgccagtgtatcagtccca
gacagcagtggcccagagcggatcctgagtgtgaatgccagcattgacactattggagag
attctgctgaaaatcatacctactctagaggagtaccagcattacagtgggattgacttt
gactgtgagcttcgcctactgatccatcagagcttagcagggggcatcattggggtgaaa
ggtgccaagataaaggagctgagagagaacacccagaccaccatcaagttgtttcaggag
tgctgtccgcactccactgacagagttgtcttggttggaggaaagccagaacgtgtcatt
gaatgtataaaagttatcctggagctggtgtcagaggcaccaatcaaaggtcgtgcccag
ccttatgaccctaatttctatgatgaaacatacgactatggtggtttcaccatgttgttc
gaggaaagaggcagacgacccatcggcggcttccccattcgtgtgcgtgggggctttgaa
cgtatgccacctgttcgaggcaacagacccatgcctccctccagaagggactatgacgac
atgagcccccgccggggtcctccgccaccactgagcagaggtggacgagggggcagccga
gctcgtaacctgcctcttccgctaccaccaccaccaagaggaggaggagacagattctca
catggcagctatcatggcagcatggacgacagaccaagtgacagaagaggccgaggagga
gaccgctatgacagcatgagtggaggtggatatgacaacaattcttcctgggatcacttt
cagtccggtggcagaggctcatacagtgatatcggaggcccgatcatcacaacgcaagtc
accatcccaaaagatctggctggctccatcatcggtaagggtggccaaaggatcaagcaa
atccgccatgagtctggggcatccatcaagattgatgaaccactagagggctctgaggac
cgcatcattaccatcacaggaacacaggaccagatccagaatgcccagtacctgctgcag
aacagcgtgaagcagtactctggtcgattcttctag
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