Scomber japonicus (chub mackerel): 128380364
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Entry
128380364 CDS
T09718
Symbol
nup54
Name
(RefSeq) nucleoporin p54
KO
K14308
nuclear pore complex protein Nup54
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128380364 (nup54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sjo03019
]
128380364 (nup54)
Messenger RNA biogenesis [BR:
sjo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128380364 (nup54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
FAM92
Motif
Other DBs
NCBI-GeneID:
128380364
NCBI-ProteinID:
XP_053196136
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All DBs
Position
19:complement(20662231..20673800)
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AA seq
533 aa
AA seq
DB search
MAFSFGGAATNTAATLTAPGFGAATTTAAAPATGFSFGSTNTGTFGGFGTTTTTAAAPGS
TFSFAAPSSTTGGLFGSTQNKGFGFSSGLGTGAAAGTSGFGTGLGTTGLGGFGGFNIQPT
QQQQGGLFGQQPQQQGQAQPTQLYQQVTALSAPTLLGDERDSILAKWNQLQAYWGTGKGY
HSNNNPPVDFTQENPFCRFKAVGYSCVPVSKDEDGLVVLVLNKKEADVRAQQQQLVESIH
KIMGSNQTLTVNVDGVKALPNDQTEVIIYVVERSPNGTSKRIPATTLFSYLEQANVKVQL
TQLGVLMSVTRTELSPAQLKQLLQNAPAGVDPIIWEQAKVDNPDPEKLIPVPMVGFKELL
RRLQIQEQMTKQHQTRVDIVSNDISELQKNQATTVAKIAQYKRKLMDLSHRVLQVLIQQE
IQRKSGYAIQVDEEHLRVQLDTIQSELNAPTQFKGRLNELMSQIRMQNHFGAVRSEERYS
VDADLLREIKQHLKQQQDGLSHLISVIKDDLEDIKLIEHGLSDSGHMRGGILS
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcagttttggcggcgcagcgacgaacacagcggcaactcttacagctcctggt
tttggggctgccaccacaactgctgctgcaccagccacaggattcagttttggctccacc
aacactggcacatttggcggctttgggacgactacaacaactgctgctgcgccgggctcc
acttttagttttgctgctccctccagcaccacaggggggctgtttggtagcacacagaac
aaagggtttgggttctcctctgggcttggcactggggccgctgctgggacatcaggattt
ggaactggattaggaacaactggcctgggtgggtttggaggctttaatatccagccaact
cagcagcagcaaggaggcttgttcggtcagcagccccagcaacagggtcaagctcagcct
acgcagctttaccaacaagtcactgctctgtcagcccccaccttgttaggagacgagcgc
gactccatcttagctaaatggaaccaactgcaggcctactggggcaccgggaagggctac
cacagcaacaacaacccacctgtggacttcactcaggagaacccattctgcagattcaag
gcggtgggatacagctgcgtcccagtcagtaaggatgaggatggtttagtggtgttggtt
ctcaataagaaggaagcagatgtgcgggctcagcagcagcagctggtggagtccatccac
aagatcatggggagcaaccagacactcactgttaatgtagacggtgtcaaagccctgccc
aacgaccagacagaggtgatcatctacgtggtggagcgttctcctaatggcacctccaaa
cggattcctgccaccactctcttcagctacctggaacaggccaacgtcaaggtgcagctc
acacagcttggcgtgctcatgtccgtcacacgcacagagctctctccagcacagctcaag
cagctgctgcaaaatgcccccgcaggagtggaccccatcatttgggagcaggccaaggtg
gacaaccctgacccagagaaattaatccctgtacccatggtgggttttaaggagctgttg
cgcaggctgcagatccaggagcagatgaccaaacagcaccagaccagagtggatattgtt
tccaatgacatcagtgaacttcagaagaaccaggcaaccacagtggccaagattgcccag
tacaagaggaagctgatggatctgtctcacagggtgttgcaggtgttgattcaacaggag
attcagagaaaaagtggttatgctatccaagttgatgaggaacacctcagagtgcagctg
gacactattcagtctgaactcaatgctcccacacagttcaagggtcggctgaatgaattg
atgtcccaaatccggatgcagaaccactttggagctgtgcgatcagaagagcgttacagt
gttgatgcagatcttctcagagaaatcaaacaacacttgaaacagcagcaggatggttta
agtcatttgattagcgtcatcaaggatgatttggaagacatcaaactcatagagcatgga
ctgagcgacagtggacacatgagaggaggcatcctgagctga
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integrated database retrieval system
