Scomber japonicus (chub mackerel): 128380411
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Entry
128380411 CDS
T09718
Name
(RefSeq) uncharacterized protein LOC128380411
KO
K06745
programmed cell death 1 ligand 1
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128380411
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
sjo04090
]
128380411
CD molecules [BR:
sjo04090
]
Proteins
128380411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
V-set
C2-set_3
NACHT
Ig_2
ig
NB-ARC
nSTAND3
AAA_22
NPHP3_N
C2-set_2
AAA_18
AAA_30
AAA
ABC_tran
RuvB_N
AAA_16
AAA_11
T2SSE
RIFIN
RNA_helicase
AAA_33
FAM194
Zeta_toxin
PhoH
AAA_17
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
128380411
NCBI-ProteinID:
XP_053196196
LinkDB
All DBs
Position
19:14172701..14180866
Genome browser
AA seq
496 aa
AA seq
DB search
MDWALVFVLQVTFLPFITSHGLFKVEAKPNKYTSELGGEVVMKCRFDPVPSDPLTGLKVY
WYWTMDNFPDRKVYVMDNGEKDLSLPDVDFQGRVKFSTEELQNGWAVLQLSRLKINDSGT
YQCLIDTALGTDYKKMTLSVTAPYKAVTKHIQEVAEQDELLLTCQSEGYPESTVVWQDGQ
GQNIIPNTTFVSTPDQLIKVTSQIRIRSLEKNNYTCRFTNDGHSATFHIPDDIPNHPVKN
DALIVALIIGLILLIIVVVLTYHRRKGAGTHNTRNLLVNGRGGFFPAPVCLQIGKENDED
LRENLRASLKAHYADNSFSTEMGYHWDDPHRLQNNEGQPVTLQSLIPEAEEMLFIEGPPG
SGKTTLAHILISSWVKGPTDALTNLLDLSMVHLLLYVDCSTAKGDLFQEIISQLSLGEKV
STEDELRTVLTRSNVLLLLDGYREGDQLFDDSLKTFISERKGCRVLIMACPGHCPTLRET
VGTRELLKLQTQTVKY
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggactgggcccttgtctttgttttgcaagtcacgtttctcccatttatcacatctcac
ggtttgttcaaagttgaggctaagccaaacaagtacacatcagagcttggaggagaagtt
gtgatgaagtgcaggtttgaccctgtaccctcagatcctcttactggcctgaaggtttac
tggtactggaccatggacaactttccggatcggaaagtgtatgtgatggataatggggag
aaggatttgtcactcccggatgtggacttccagggcagagtgaagttttctactgaggag
ctgcagaatggctgggctgtgttacagttgtccaggctcaagatcaatgattcaggaacc
taccagtgtctgatcgacacagcactagggactgattataaaaagatgactttgtctgtt
acagcaccatataaagccgtgactaaacacattcaggaggttgcagagcaggatgagttg
ctgctgacatgccaatctgaaggatatcctgagtccactgttgtgtggcaggatggacaa
gggcaaaatatcattcccaacaccacttttgtgtcaacaccagaccagcttattaaagtc
accagtcagatacgcatcaggtcattggagaaaaacaactacacctgtcgcttcacaaat
gatggccactctgcaacatttcatattccagatgacataccaaaccatcctgtaaaaaat
gatgctctcatcgttgcattgatcataggcttgattctgctcattattgttgtcgtgctc
acttaccatcgacggaaaggagccggcacccacaacaccaggaaccttctggtcaatggt
cgtggcgggttttttcctgctcctgtctgcctacaaatagggaaagaaaatgatgaagat
ttaagggaaaatctgagggcgtctctgaaagcccattatgctgacaactcattcagtacg
gagatgggataccactgggatgaccctcacagactacaaaacaatgagggccagccagtg
actcttcaatccttaatcccagaagctgaagagatgctttttattgagggacccccagga
agtgggaagacgaccttagcccacatcctgatctcctcttgggttaagggccccacagat
gccctcactaacctccttgatctcagcatggttcatcttcttctatatgtggactgtagc
actgcgaagggtgacttgtttcaagaaataatatctcaactgtctctcggggaaaaggta
tcaacggaggatgagctgaggactgtgttaaccaggtccaacgttctgctgttgttggat
ggatacagagaaggggaccaattatttgatgattccctgaagacgtttataagtgaaaga
aaaggatgcagggtgttgatcatggcctgccctggacactgccccacactcagggaaact
gttgggacacgagagctgttgaagctccaaacacaaactgtgaagtactga
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