Scomber japonicus (chub mackerel): 128380438
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Entry
128380438 CDS
T09718
Symbol
rab11fip1b
Name
(RefSeq) trichohyalin
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128380438 (rab11fip1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128380438 (rab11fip1b)
Membrane trafficking [BR:
sjo04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
128380438 (rab11fip1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
Motif
Other DBs
NCBI-GeneID:
128380438
NCBI-ProteinID:
XP_053196227
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All DBs
Position
19:complement(15153828..15166684)
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AA seq
1414 aa
AA seq
DB search
MSLADQQWCPTSVQVTVLQARGLRIKGKSGTNDAYAVMQVAKEKYQTSVVEKSVAPVWKE
EAAFDLHQGGGGERSTLHVHVLHRALVGPDKLLGQAVINLLQLSEDKTRNKTEWFKLLDK
TGKSDKDRGEVLVDIQFMRNNMTASMFDISAAGKSRSRLGKFKDKVRGKKKESDAASSMV
PSFTQVLTDSEDEANGEAEVAAGKDEKKKKLKMKSLFSPKSNLQKNMSQSMSVLPGKNSS
LSGSLSSGLNVDSSEGKKKFKFMIHKRSGSSDSKDSSATQQKHGSGEQSNLCINGSHVYC
EEPPPRTARIGSNFSLASSGHGSMEDVPENSPPSVDSLRTVRQYSPWTEEEEEEEAEVEN
KKKDMEEMRIKEEKEMVRRQTLERLAEEKRRKEEEERKQIEEKKLRRVEERAKEEERVKR
EEDERERLAEEKRRLEEQERRRIEEEKICREEEEKAQEEKRRKEKEEEEERVRRQEEELE
RKRIEEEKARKEEEERIRMEEERAQEERKRRKEKEEEEERMRRQEEERERLAEEKRRQEE
EERKRIEEEKARKEEEERIRMEEERAQEERRRRKEKEEEEERMRTRQEEERERLAEEKRR
QEEEERKRIEEEKARKEEEERIRMEEERAQEERRRRKEKEEEEERMRTRQEEERERLAEE
KRRQEEEERKRIEEEKARKEEEERIRMEEERAQEERRRKEKEEEEERMRRQEEERERLAE
EKRRQEEEERKRIEEEKARKEEEERIRMEEEKHERLAVEKRRLEEQEKRRVEEEKIRREE
EERIRMEEERAQEERRRKEKEEEEEIIRRQEELERLAEKRRQEEEERKRIEEEKARREEE
EQIRREEEKAQEERVRRQEEEREKLAAEKRRQEEERKRIDEEKARKEEEEMIRRERAQEE
KRRQEEEREKKRRQEEEERIRKEERVRKEKEEIERLAEEKRREEQEKRRIKEGEKTKREK
EGLTGVLEEQDKRENQRKDGHRAIESQSPAEVTSTNPFEENISNNPFDESPDSPAEPNSN
TIQQRYQFPEPSVGSSAISTDEKAVITTQQEKRQAPLPPERNQTKRRSNKEPDASTQHLA
QINKLSKEKNVKTASILPQRLLPLGRPSTDTKNNQSLTLKSATKGTTTTTTAKHTKRPAP
TRPGSVEEKPLSEPKTSNGCVSEAKQVPVVYGLNPFDDDEDENELTAQDDKTASGNTSSV
VWPPAVSQTHNKDDISQTKKSSKVARAPLPPEKTATTSSTLNKLNTDGAHDKTHVTVPDK
NATQTCDPEPEAIHSSRVKESPLQESQPVTVLRAGEEASEKKEGPHASSRRLQPVKPLNP
LEQQSVSGEKDPKSTGIPCEVEENTKVSSTGVKGPFSQLTQEELISLVLKQEKQLLERDS
KISELECYIDNLIVRVIEEKPSILMSLNAMKKTV
NT seq
4245 nt
NT seq
+upstream
nt +downstream
nt
atgtccttggcggatcaacagtggtgtcccacaagcgtccaggtaacggtactccaagcc
agaggcctcaggataaaggggaaaagcggcactaacgatgcgtacgcggtcatgcaagtg
gccaaggaaaagtaccagacctcggtggtggagaagagcgtggctccggtgtggaaggag
gaggccgccttcgacctgcatcagggcggcggaggggagcgcagcaccctgcacgtccac
gtcctgcaccgagccctggtgggtccagacaagctgctgggacaggctgtcataaacctg
cttcagctcagtgaggacaaaacccgcaacaagaccgaatggtttaaactgctagacaag
accggcaagtcggacaaagacagaggagaggtacttgtggacatccagttcatgagaaac
aacatgacagccagcatgttcgacatctctgctgccggcaaatcccgatctcgcctgggc
aagttcaaagacaaagttcgtgggaagaaaaaggaatcggatgctgcatcttccatggtg
ccgtcttttacccaggttctgacagacagcgaggacgaagcaaacggggaagctgaggta
gctgcaggcaaggacgagaaaaagaagaagcttaagatgaagtctttgttttctcccaag
tctaacctgcagaagaacatgtcgcaatccatgtctgttctgcctggaaagaattcctca
ctgagcggcagcctgtcctctggtctgaatgtggattcctctgaaggtaaaaagaagttc
aagttcatgatacataaacgctcgggcagctcagacagcaaagattcctctgctactcaa
cagaaacatggttcaggggagcaaagcaacttgtgcatcaatggcagtcacgtatattgt
gaagagccaccgcctcggaccgctcgcatcggctcaaacttcagtctggctagttcaggc
catgggtccatggaagatgtccctgagaactctcccccctctgttgattcactcaggact
gtgaggcaatactcaccctggaccgaggaggaagaggaggaggaagctgaagtagaaaat
aagaaaaaggatatggaagaaatgaggataaaagaagagaaagagatggttaggagacaa
acgctggagaggttagctgaggagaagaggagaaaggaggaagaagaaagaaagcagatt
gaagaaaagaaactaaggagggtggaggagagagctaaagaagaggagagagttaagaga
gaggaagatgagcgtgagagattagcagaagaaaagagaagacttgaggagcaagaaagg
agacggattgaagaagagaaaatttgcagggaggaagaggaaaaggctcaggaagagaag
agaagaaaagaaaaggaggaggaggaggagagggtgagaagacaagaggaagagcttgaa
aggaaaaggattgaggaagagaaagctagaaaggaggaagaggagaggattaggatggag
gaggaaagggctcaggaagagaggaaaaggaggaaagaaaaggaggaggaagaggagaga
atgaggagacaagaggaagagcgtgaaagattagcagaagagaagaggagacaggaggaa
gaggaaagaaaaaggatcgaggaagagaaagctagaaaggaggaagaggagaggattagg
atggaggaggaaagggctcaggaagagaggagaaggaggaaagaaaaggaggaggaagag
gagagaatgaggacaagacaagaggaagagcgtgaaagattagcagaagagaagaggaga
caggaggaagaggaaagaaaaaggattgaggaagagaaagctagaaaggaggaagaggag
aggattaggatggaggaggaaagggctcaggaagagaggagaaggaggaaagaaaaggag
gaggaagaggagagaatgaggacaagacaagaggaagagcgtgaaagattagcagaagag
aagaggagacaggaggaagaggaaagaaaaaggattgaggaagagaaagctagaaaggag
gaagaggagaggattaggatggaggaggaaagagctcaggaagagagaaggaggaaagaa
aaggaggaggaagaggagagaatgaggagacaagaggaagagcgtgaaagattagcagaa
gagaagaggagacaggaggaagaggaaagaaaaaggattgaggaagagaaagctagaaag
gaggaagaggagagaattaggatggaagaagaaaagcatgagaggttagcagtagaaaag
aggaggcttgaggagcaagaaaagagacgagttgaagaagaaaaaatacgcagggaggaa
gaagagaggattaggatggaggaagaaagggctcaggaagagaggaggagaaaagaaaag
gaggaggaagaagagataattaggagacaagaagagcttgaaagattagcagagaagagg
agacaagaggaagaggaaagaaaaaggattgaggaagaaaaggctagaagggaggaagag
gaacagattaggagggaggaggaaaaggctcaggaggagagagtgaggagacaagaggaa
gagcgggaaaaattagcagcagaaaagaggagacaggaagaagaaagaaaaaggattgac
gaagagaaagctagaaaggaggaagaggagatgattaggagggaaagggctcaggaagaa
aaaaggagacaagaggaagagcgtgagaaaaagagaagacaagaggaggaagaaaggatt
agaaaagaggagagggtgaggaaggaaaaggaagaaattgagagattggcagaggagaag
agacgagaggaacaagaaaagaggaggattaaggaaggggagaaaactaaaagagagaaa
gaggggttaacaggagtattagaagaacaggacaagagggaaaatcaaagaaaagatgga
cacagagcgatagagagtcaaagtcctgcagaagttacttctactaatccatttgaagaa
aacatttcaaataatccctttgatgagagtcccgactcacctgctgaacccaacagcaac
actatccagcaaagatatcaatttcctgagccatcagtgggaagctcagccatttccact
gatgaaaaagctgtcattacgactcagcaggagaagcgacaagctcctctgcctccagaa
agaaatcaaaccaagagacggagtaataaggagccagatgcatctacacaacacctggca
caaattaacaagttgagcaaagaaaaaaatgtcaaaactgccagtattctccctcagcgc
ttgttgcctctgggtaggccttccacagacacaaagaacaaccagagcttgacgcttaag
agtgccaccaaaggaactacaacaacaacaacagccaaacacactaaacgacctgcacca
actagacctggctctgtggaagagaagccattatctgaaccaaaaacatctaatggatgt
gtctcggaggcaaaacaagtccctgttgtttatggtttaaatccatttgacgacgatgaa
gatgaaaatgagctcacagcccaagatgataaaacagcttctggtaacactagttcagta
gtctggcctccagctgtgtcacaaactcacaataaagacgacatctcgcagacaaaaaaa
tcgtcaaaggtagcccgcgcacccttgcctcctgaaaagacagccaccacatcgagcact
ttaaacaagctaaacactgacggagcccatgataaaacacatgtgactgtacccgataag
aatgcaacacaaacatgtgatccagagccagaagccatacactccagcagagtcaaggag
agtccactacaagagtcccagcctgtgacagtgctgcgtgctggagaggaggcaagtgag
aagaaggaaggccctcatgcatcatcgcgcaggcttcaacctgtaaaacccctgaatcca
ttggaacagcagtctgtctcaggggaaaaggatcccaaatccacaggaataccttgtgaa
gttgaggagaacacaaaggtcagcagcactggggtgaaggggccgttctcccagctgact
caggaggagctcatctctctagtgctgaaacaggagaaacagctgctggagagggacagt
aagatatcagagttggagtgctacattgacaacttgattgtgcgcgtcatagaggagaaa
ccaagtatcctcatgtccctgaacgctatgaagaaaacggtgtag
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