Scomber japonicus (chub mackerel): 128380466
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Entry
128380466 CDS
T09718
Symbol
srek1
Name
(RefSeq) splicing regulatory glutamine/lysine-rich protein 1 isoform X1
KO
K13165
splicing regulatory glutamine/lysine-rich protein 1
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sjo03041
]
128380466 (srek1)
Spliceosome [BR:
sjo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
128380466 (srek1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RBD_DEAH11
Motif
Other DBs
NCBI-GeneID:
128380466
NCBI-ProteinID:
XP_053196260
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All DBs
Position
19:24597897..24612560
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AA seq
471 aa
AA seq
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MSGIPGTAVVQVTNLSSAVSSEQMRTLFGFLGDIEELRLYPPDNAPLSFSSKVCYIKYRD
PCSVGVAQHLTNTVFIDRALIVVPCAEGKIPEEAKALSLLAPAAPVPSLIPGGGLLPIPT
PAPLQNLNLPIVNRISPSVDTATASASSHSQPPLMGNVDPSKIDEIRRTVYVGNLNSQTT
TAEQLLEFFKQVGDVKFVRMAGDETQPTRFAFVEFVEQDSVARALTFNGVMFGDRPLKVN
HSNNAIVKPPELTPQAAAKELESVMKRVREAQSTIAAAIEPETKKRSSSRSRRSRRSRSR
SRSVSNSKTRRKRSRSKHRPSQKSWPRSDSHSSRSNHKRRSRSRDKRHSRSRSKGHKRRS
KDRSRSPRRKARSPSPKKSKKDKRRERSRERRDFSTSRKRSRKDEDRIKIKAKPLKVERD
YNREEKDDYESDREDSATPSEDMTPSPFTQHNGSYKHHHDEDTYVGANSTK
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggataccggggactgctgtcgtccaggtaaccaacctgtcttcggccgtgagc
agcgagcagatgcgcactctgttcggtttcctgggagacatcgaggagctgcggctctac
ccgcccgacaatgctcctctgtctttctcctccaaagtgtgttatataaagtaccgagac
ccctgcagtgttggtgtggcgcaacatctcaccaatactgtttttattgacagagctttg
atagtagtgccatgtgcagaagggaagatcccagaagaggccaaggctttgtcacttttg
gcacccgccgccccagtgcccagcctgattcctggcgggggactgctacctattccaact
ccagctccacttcaaaatctgaaccttcccatagtgaatcggatatcacctagtgtcgac
acagccacagcctcagcctcatcgcactcacagccgcccctcatgggaaatgtagacccc
tctaaaatcgatgagatcaggaggacggtctacgtcggcaacttaaactcacagacgacc
accgcagagcagctgttggagtttttcaagcaggtgggagatgtaaagtttgtgcggatg
gccggagacgaaacccagccgacacgcttcgccttcgtagagtttgttgaacaagactcc
gtcgccagagctctgacgttcaacggagtcatgttcggagacagacccctcaaggttaat
cattccaacaacgccatagtaaaacctccagagctgacaccacaggctgctgctaaggag
ctagaaagtgtgatgaagagagtgagggaagcccagtctaccattgctgctgccatagaa
ccagaaacaaagaagcgttcctccagtcgatctagaaggtcgcggcggtcacgctcgcgg
tcacgttcagtttcaaactcaaaaacacggaggaaaaggtcccgttcgaaacacagaccg
tcacagaagtcgtggccgaggagtgactcccacagttcccgaagtaaccacaagaggcgc
tcacgatctagagacaagagacacagccgcagtcgctccaagggccacaagaggaggagt
aaggacaggtccaggagccctcggaggaaagccagatcaccctcaccaaaaaaaagtaag
aaagacaagaggagggagcgcagcagggaaagaagagacttctccacatcgaggaagagg
agccgcaaagatgaggacaggataaagatcaaggccaagccactaaaggtagaaagggac
tacaacagggaagaaaaggacgactacgaaagcgacagagaagactcggccacaccgagc
gaggacatgacgccatcgcccttcacccagcacaacggcagctacaaacatcaccacgac
gaagacacgtacgtgggcgccaacagcaccaagtga
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