Scomber japonicus (chub mackerel): 128380482
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Entry
128380482 CDS
T09718
Name
(RefSeq) E3 ubiquitin-protein ligase UHRF2-like isoform X1
KO
K15713
E3 ubiquitin-protein ligase UHRF2 [EC:
2.3.2.27
]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128380482
Enzymes [BR:
sjo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128380482
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128380482
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTD
SAD_SRA
ubiquitin
PHD
PHD_2
Rad60-SLD
zf-C3HC4_2
zf-RING_2
zf-RING_UBOX
DUF8139
Motif
Other DBs
NCBI-GeneID:
128380482
NCBI-ProteinID:
XP_053196285
LinkDB
All DBs
Position
19:16212314..16241727
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AA seq
918 aa
AA seq
DB search
MWIQIRTIDGKETRTVEDLSRLTKIESLRLKIQDIFNVSPQQQRLFYRGKQMEDGQTLFD
YNVGLNDIVQLLIRSQTDPPDSPITKDSSSVACSSAPPSDSRSESHDSPAPISPAAMETS
TNIDNDSSDTTSTINKAKPDTSATSNSASTKNGFKSSSPVLDTQPPTSSKNALVNPGIGM
YKINELVDCRDVSIGAWFEACIENVTRTPKGQITSTKGKVGRPPKRTNGKLEAEQGQAYS
QGQTTDSNRNNVVLNSESNGASTSQTDSTATTETKEREEDVIYHIKYDDYPENGVVEMRP
VDVRPRARTLLLWDQLKVGMQVMVNYNMETPEERGFWFDAEVQALNQTTRTNKELRVKIL
LGGPGDVIGDCKVQFLDEIYQVEKPGTCPLSAADGQFKRKSGPECKHCKADPDAECRFCS
CCVCGGKQDAHMQLLCDECNMAFHIYCLNPPLASIPDDEDWYCPTCKNDTSEVVKAGEKL
KASKKKAKMPSATTESQRDWGKGMACVGRTKECTIVPSNHYGPIPGIPVGTTWKFRVQVS
EAGVHRPHVGGIHGRSNDGSYSLVLAGGFEDEVDRGDEFTYTGSGGRDLSGNKRIGEHCF
DQTLTHMNRALALNCDAPLNDKDGAESRNWRAGKPVRVVRSSKGRRISKYAPEEGNRYDG
IYKVVKYWPEIGKCGYLVWRYLLRRDDLEPAPWTPEGLDRIKKLDLGVQYPPGYLAAMAN
KTKKEANARPGRSGRGKHHPGRGRPRRQRKIKEKEENDEEEEEEQPMAGVEEEEPESNGE
QKTTADSESSPVAEPPSKRLKIEETFQLSEQQQQLIREDTANKKLWDEAMGHLAEGPNFL
RKMEQIFMCVCCQELAFQPITTVCTHNVCKTCLQRSFRAKVYTCPACRHDLGKDYIMTQN
KTLQMLLDQFFPGYSKGR
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgtggatccaaattcgtactatagacgggaaggagacgcgtaccgttgaggatctttct
agattgaccaaaattgagtctttacggttgaaaatacaggacatcttcaatgtgagccca
caacaacagcgcctgttctacagagggaagcagatggaagatggccagacgctgtttgac
tacaacgtgggtctcaacgacattgtccagctgctgatccgctcacagactgaccctccc
gacagccccatcaccaaggactcctcaagcgtcgcctgtagttcagctcctccctctgac
tccagatctgaaagccacgactccccagctcccatctcacccgctgctatggaaacttcc
accaatatagacaatgacagcagtgacaccaccagcaccattaacaaagccaagccggac
accagcgctaccagtaactcagccagtaccaaaaatgggtttaagtcctccagtccggtg
ttggacacccagccgccaacatccagcaaaaacgcactagtcaaccctggaattgggatg
tacaagattaacgagctggtggactgcagagacgtgagcatcggcgcctggtttgaggcc
tgcatcgaaaatgtgacacgcactcccaaaggacagataacatccaccaagggcaaggtg
ggccggcccccaaaaaggactaatggaaagctggaggccgaacagggacaggcctacagc
cagggccaaaccacagacagtaacaggaataatgttgtgttaaactcggagagtaatgga
gcctccacctctcaaacagactctacagcaactacagagaccaaggagagagaagaggac
gtaatttaccacattaaatatgacgactacccagagaatggtgtagtggaaatgagaccg
gtggatgtgcggcctcgtgccaggaccctgctgttatgggaccagctaaaggttggcatg
caggtgatggtcaactacaacatggagaccccagaggagagaggtttctggttcgacgct
gaggttcaggccctcaatcaaactacgcgcaccaacaaagagctccgagtcaagattctc
ctggggggtcctggagacgtgattggcgattgcaaagttcagtttctggatgaaatctac
caggtggagaaaccaggaacttgtccactctcggctgcagatggacaatttaaacggaag
agtgggcctgagtgtaagcactgcaaggccgacccggacgccgagtgtcgcttctgctcc
tgctgcgtgtgcggcgggaagcaggatgctcacatgcagctgctgtgcgatgaatgcaac
atggcgttccacatctactgcctcaacccgccgcttgccagcatcccagatgacgaggac
tggtactgtcccacctgtaagaatgacaccagtgaggttgtcaaggcaggagaaaaactc
aaagccagcaagaagaaggctaagatgccatcggcaacaactgagagtcaaagggactgg
ggaaagggtatggcctgtgtggggcgtaccaaggagtgcacaattgttccttcaaaccac
tacggacccatacctggtattcctgttggaaccacatggaaattcagagttcaggtgagc
gaggcaggtgttcacaggccacatgtcggtggtatccacgggcgcagtaacgatggctcc
tattctctggtgttggctgggggctttgaggatgaagtggacaggggagatgagttcacc
tacacaggcagcgggggccgtgacctctcaggaaacaaacggatcggagagcactgtttt
gaccagacccttacccacatgaacagggctctggctttaaactgcgatgcgcccctgaac
gacaaggacggggcagagtccaggaactggcgggcgggaaaaccggtgagagtggtgcgc
agctccaaaggccgacgcatcagcaaatatgctcctgaggagggcaaccgctacgatggt
atctacaaggtggtaaaatactggccagagataggaaagtgtggttatctggtgtggcgg
tacctgctgagacgggatgatctggagccagcgccatggacacctgaagggctggacagg
ataaaaaaactggaccttggtgttcagtacccacccggctacttggcagccatggctaac
aagactaagaaagaggccaacgccagacccggtcgcagcggtcggggtaagcaccatccc
gggagggggaggccgcggagacaacgcaagatcaaggagaaagaggagaatgatgaggaa
gaggaggaggagcagccgatggccggcgtggaagaggaggagcctgaaagtaatggagag
cagaagacaaccgcagatagtgaatcgtcaccggtggcagagcctccctcaaaacggttg
aagatagaagagaccttccagctgtcagagcagcagcagcagttaatccgagaggacaca
gccaacaagaaactctgggacgaagccatgggacaccttgcagagggaccaaatttcctg
cgcaagatggagcagatcttcatgtgcgtgtgctgccaggagctggccttccaacccatc
accaccgtctgcacacacaatgtttgcaagacttgtcttcagcggtcgttccgagcgaag
gtgtacacctgccccgcctgccgtcacgacctgggcaaagactacatcatgacccaaaac
aagacgctccagatgctgctcgaccagttctttcccggctacagcaagggccgatga
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