Scomber japonicus (chub mackerel): 128380504
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Entry
128380504 CDS
T09718
Symbol
cacna1bb
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04010
MAPK signaling pathway
sjo04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128380504 (cacna1bb)
04020 Calcium signaling pathway
128380504 (cacna1bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sjo04040
]
128380504 (cacna1bb)
Ion channels [BR:
sjo04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
128380504 (cacna1bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
128380504
NCBI-ProteinID:
XP_053196320
LinkDB
All DBs
Position
19:7403139..7573545
Genome browser
AA seq
2510 aa
AA seq
DB search
MKKTSPYNSRWAERRSTVVYAVRSATFGSWRMLTLGSEYEDTWAPSPDKKRQPTQQMEGE
PGLTEGTDTCSGDPEEPLWKASHTDTGQKFDTVLHLDGSSRAGRRDGVRHMVKKHQTLNN
TLWPRRMARFAEDLPTRYGGGAGGAGRGAPGAGRGGARGGGAPGGQRMYKQSMAQRARTM
AIYNPNPVKQNCFTVNRSLFIFREDNLIRKYAKRITEWPPFEYMILATIIANCIVLALEQ
HLPASDKTPMSERLDDTEPYFIGIFCFEAAIKIIALGFAFHKGSYLRNGWNVMDFVVVLT
GILATVGSDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVM
FAIIGVEFYMGKFHQTCFKISTGEIAADWPCGHEPPARLCPNETQCKEYWNGPNFGITNF
DNILFAVLTVFQCITMEGWVDILYNTNDVVGNTWNWLYFIPLIIIGSFFMLNLVLGVLSG
EFAKERERVEKRQEFLKLRRQQQIERELTGYLEWICKAEEVLLEEEEEIAEEKSPLDGAW
YKRKQNLSVLKRGKAKKGKNDLIGAEEGEDPFVDISSVAPPGSPFGRASVKSSGKMDSSS
YFRRKEKRTRFFIRRMVKAQSFYWIVLCLVGLNTLCVAIVHYNQPEWLTTALYTAEFVFL
GLFLSEMTLKMYGLGVRNYFHSSFNCFDFGVIVGSIFEVIWDMIKPGASFGISVLRALRL
LRIFKVTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEDETP
TTNFDTFPAAILTVFQILTGEDWNAVMYHGIESQGGVRRGMFSSVYFIVLTLFGNYTLLN
VFLAIAVDNLANAQELTKDEEQQEEAANKKLALQKALEVKEVSPMSAANISIAAFVKQNR
DALSRRSSINSIQSPKEQQRTAKAMSVWEQRTNQLRRNNLRASSEALFNELDPEERLRVS
SALHLHPDMKTHLDRPLVVEDRNGDKPSRTPEGGQEEAGDPSRQDGAGDNLHAHSRKHHR
HRDRNGESKEGGDGRGGRHHTHHSRNRDHNNDGTQTKERRGERSQGHRHHHPAGSPEEEA
NDVRGGGMEERGHRHHHSHRPPKEGNGMLANGAQGERRGRGGGGGDSNGERKGRSSRMVR
AQSTLDGEDSKRNKNGTKVHRDRQADAEEDGLASSPLQAMRSSLSLGEKQEDADNQKNSN
RASQAGLNSNAIHIPVTITAPPGETTIIPMNNIDCDNFRLSEEKKDLEEEEAANGPRQIL
PYSSMFIFGQTNPVRRLCHYVVNLRYFEMCILMVITMSSIALAAEDPVQANAPRNNVLKY
LDYVFTGVFTFEMVIKMIDLGLLLHPGSYFRDLWNILDFIVVSGALVAFACSSLMGSQQS
VARGTKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYILFMF
IFAVIAVQLFKGKFFYCTDESKGLEKDCRGQFLDYDRDDVAAQPREWKKYDFHYDNVLWA
FLTLFTVSTGEGWPLVLKHSVDATYEDQGPSPGFRMETSIFYVVYFVVFPFFFVNIFVAL
IIITFQEQGDKAMSECSLEKNERACIDFAINAKPLTRYMPENKQSFQYKMWKFVVSPPFE
YAIMTLIALNTVVLMMKFHEAPVLYEAMLKYLNIVFTALFTLECILKIIAFGPLNYLKAA
WNVFDFVTVLGSITDILVTEIKTDKLINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQS
FKALPYVCLLIAMLFFIYAIIGMQVFGNIDLNEETAINHHNNFQTFLQALTLLFRSATGE
AWHEIMLSCLSNRPCHKDSGTLGKECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEY
LTRDASILGPHHLDEFIRVWAEYDPAACGRICYQDMYKLLRFISPPLGLGKKCPNRVAYK
RLVKMNMPIADDNTVHFTSTLMALIRTALEIKLASGVLAQHLCDVDLKREINRVWPSLSQ
KTVDLLVTPHKYNELTVGKVYAALMIFDYYKQNRAKRLQQQNPSTGPTSKLGALFRPVLP
LTNIQEVEPPFPSPKWPMPPKPEPEAKSEAVPTTTAPLRSAIKHSQSGDVSQAALRPKGR
RKLQRGQSEDVPYSTRPQESVEMKKVENISDTEEYPNLEGHCRAASLPRLNAEYYRSHPR
HAPGTHLAPIVDLSPIRRSASSLTPQYHQEGGLREYNLERPDLAQSSSESGQVQGQDRAH
HHHHHHRCHRRRDKDKDKKQKSLDRAASVQPSSTVAEGLSRERARERDRSRPHERRHHSS
AGEKQRYYSCERYGSREQCHAKSAGPSRSTSPGEGPDTVFLKQHGSGVIKAVPVTLPSGS
STPGRGRRQLPQTPLTPRPAVAYKTANSSPLPSGASTATTGHQTRFSRGLSEHERLVGGY
DESPIPVTRIGSDPNLNRQPKDASQQALLEEAEDFQDAVSSHGGGARSARTTSATASATH
GTAAAPVTVPTTQGRAGVVPNGYHFTLGVNSASGSRGTGSLRERDEEDWC
NT seq
7533 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagacaagtccttacaactcaagatgggcagagagacgatctactgtggtttac
gcggtgcgctcagccaccttcggctcttggaggatgctcaccctggggtcggagtatgag
gatacctgggctccatcacctgacaagaagcgtcaacccacgcaacagatggagggggag
ccagggctcactgagggcacagacacctgcagcggtgacccggaggaacctttatggaaa
gcctctcacactgacacagggcagaagtttgacacagttttacacttggatggatcgagc
agggctgggagaagagatggtgtgcgtcacatggtcaagaagcaccagaccctgaacaac
acgctgtggccccgcagaatggctcgcttcgcagaagatctacccacccgctatggagga
ggcgcaggcggagcagggagaggcgcgccgggcgctgggagagggggagcccggggtggc
ggcgctccgggtggccaaaggatgtacaagcagtcgatggcccagagagcccggacaatg
gccatttacaacccgaaccctgtcaaacaaaactgcttcaccgtcaaccgctccctcttc
atcttccgagaggacaatctcatcaggaagtatgcaaagcgaataacagagtggcctcca
tttgaatacatgatcctggctacaattatcgccaactgcatcgtcttggccctggagcag
catctacccgccagcgacaagacacccatgtcagaacgcctggacgacacagagccctac
tttattggaatattctgtttcgaggctgccattaagatcatcgccctgggctttgcgttt
cacaaaggctcctacctccgcaatggctggaatgtaatggacttcgtggtcgtcctcacg
ggaatcttggccacggtgggttcagactttgacctgcgaacactgcgggcggtgagagtc
ctgagacccctcaaactggtgtcaggaatccccagtctccaggtggtgttgaagtccata
atgaaagccatggttcccctgcttcagatcggcctgctgctcttcttcgccatcgtcatg
tttgccatcatcggggtggagttttacatgggcaaattccaccagacctgcttcaagatc
agcacgggtgagatagcagcagactggccttgtggtcacgagcccccggccaggttgtgt
cctaacgagacgcaatgcaaagagtactggaatggacccaacttcggtatcacaaacttc
gacaacatcctattcgcggtgcttactgtgttccagtgcatcaccatggagggctgggtg
gacatcctctacaacactaatgatgtggtaggaaacacctggaactggctctactttata
cctctcatcatcatcggctccttcttcatgctcaacctggtgcttggtgtcttatcagga
gaatttgccaaagagcgagaacgtgtggagaagaggcaagagttcctgaagcttcggagg
cagcagcagatcgagagagagctcaccggatacctggagtggatctgcaaagcagaggag
gtgttgctggaggaggaagaagagattgcagaggagaagtccccgctggacggtgcgtgg
tacaagaggaaacaaaacctttcagtcctgaaacgaggcaaagccaaaaagggtaaaaac
gacctgatcggcgccgaagaaggagaagatccttttgtggacatctcctccgtcgctcca
cccggctctccgtttggtcgggctagcgtgaagagcagtggtaagatggacagctcctct
tacttccggcgtaaagagaaaaggacccgtttcttcatccgccgcatggtgaaagctcag
agcttctactggatcgttctgtgtctggtgggcctcaacactctgtgtgtggccatcgtc
cactacaatcaacctgagtggctcacaacagccctctacacagcagagtttgtcttcctc
ggtttgtttctctctgagatgactttgaagatgtacggcctcggagtaaggaattatttc
cactcctcctttaactgctttgattttggggtgattgtgggaagtatttttgaggtgatc
tgggacatgattaaaccaggagcgtcatttggtatcagcgtgttgagagccctgagactg
ctcaggatatttaaagtcaccaaatattggaactctttgagaaacctcgtggtttcactt
ctcaattccatgaagtccatcatcagcttgctcttcctcctcttcctcttcatcgtggtc
tttgctctgctaggcatgcagctcttcggaggacagtttaactttgaagacgagacacca
acaacaaactttgataccttcccagcagccatcctcactgtgttccagattctaactggc
gaggactggaacgccgtgatgtaccacgggatcgagtctcaaggaggtgttcgccgcggc
atgttctcctccgtctatttcatcgtcctcacgctctttggaaactacaccctgctgaat
gtcttcttggctatcgctgtcgataacctcgcaaatgcacaggagctgactaaggatgaa
gaacagcaggaggaggcagccaataagaagcttgccctacagaaggctttggaggtgaag
gaagtcagcccgatgtcagcagccaatatctcgattgctgcttttgtaaagcaaaatcga
gatgcactctctcgcaggtcgtccatcaacagcattcagtcacctaaggagcagcagcgg
acagcaaaggccatgtcagtgtgggagcagaggaccaaccagctaaggagaaacaactta
agggcgagcagcgaggccttgtttaacgagctcgaccccgaggagcgccttcgggtgtcc
tctgccctccacctgcaccccgacatgaagactcacctggaccggccgctcgtggtggaa
gacagaaacggcgacaaacccagcaggactcccgaaggaggacaggaggaagctggggac
ccttccaggcaggacggggcgggagacaacctccacgcgcactccaggaagcaccaccgc
caccgagacaggaacggggagagcaaggagggaggcgacggccgcggagggaggcaccac
acccatcacagccgcaacagagatcacaacaatgacggcacacagacgaaagagaggaga
ggggagaggagccaaggacacaggcaccaccacccggctggctcccctgaggaggaggcc
aatgatgtacgaggaggagggatggaagaaaggggacatcgccaccaccattcccatcgt
ccaccaaaagaggggaatgggatgttggcaaacggtgcacagggagagcgcagggggaga
ggaggaggaggaggagatagtaatggagaaaggaagggacgctcctctcgtatggtcaga
gctcagtccacactggacggagaggacagtaaacgcaacaagaatggaaccaaagttcac
agggataggcaggcagatgctgaggaggacggcctcgcctccagtcccctacaggcaatg
cggagcagccttagtctcggtgagaagcaagaggatgccgacaaccagaagaactccaac
agggccagccaggccggcctcaacagcaacgccatccacatccccgtcaccatcacggct
ccacccggagagaccaccatcatacctatgaacaacatcgactgtgataacttccgactg
agcgaagagaaaaaagatctggaggaggaggaggcggctaatgggcctcggcagatcctt
ccctacagctccatgttcatctttgggcaaacgaacccggtgcggcggctgtgtcactac
gtggtcaacctccgctacttcgaaatgtgcatcctgatggtcattaccatgagcagcatc
gccctggcagccgaggaccctgtgcaagcaaatgcgccgcgcaacaacgttctcaagtat
ctggattatgtatttaccggagttttcacttttgagatggtgattaagatgatagatttg
gggcttctcctccaccccggctcttatttccgggacctgtggaacattctggacttcata
gtggtcagcggagctctggtggccttcgcctgctcgagccttatgggatcgcaacaaagc
gtggccagagggacgaaaggcaaggacataaacaccattaagtccctgagggtcctccga
gtcctgcgaccactcaagaccattaaacggctccccaagctgaaggctgtgttcgactgt
gttgtaaactctctgaagaacgttctcaacatccttatcgtctacattctcttcatgttt
atcttcgccgttatcgccgtgcagctctttaagggcaaattcttctactgcactgatgag
tccaagggtctagagaaagactgcaggggtcagtttctggactacgacagggatgatgtc
gcagctcagcccagagagtggaagaagtacgatttccactatgacaatgtcctatgggct
ttcctaacactattcaccgtctctactggagagggctggccactggtcctgaaacactct
gttgatgccacctatgaggaccaaggtcccagcccaggcttccgcatggagacctccatc
ttctacgtggtgtactttgtggtgttccctttcttcttcgtaaacatattcgtggctttg
atcatcatcaccttccaggagcagggagacaaggccatgtctgagtgtagcctggagaag
aatgagagggcttgcattgactttgccatcaacgccaagccgctgaccagatacatgcca
gagaacaagcagtccttccagtacaagatgtggaaatttgtcgtatcccccccgttcgag
tacgccatcatgactttaatcgccctcaacacggtggtgctgatgatgaagttccatgaa
gctccagtcctgtacgaggccatgctgaaatatctaaacatcgtcttcacggccctcttc
acactggagtgcatcctcaagattattgccttcggtccactgaactacctgaaagcagcc
tggaatgtatttgactttgtgactgtgctcgggagcataacagacatcttggtcacagag
ataaagacggacaaattgataaacttgagtttcttgaggctgttcagagcagctcgactc
atcaaactgctgcggcagggctacaccatccgcatcctgctgtggaccttcgttcaatcc
ttcaaggccctgccgtatgtgtgcctgctcatcgccatgctgttcttcatctatgccatc
attgggatgcaggtgtttggtaacatcgacctaaatgaagaaactgccatcaatcaccac
aacaacttccagacctttttacaggctttgaccctcctcttcaggagtgcgaccggcgag
gcgtggcatgagatcatgttatcttgtctcagtaaccggccgtgtcataaggattcagga
actttggggaaggagtgcgggagtgactttgcctacttctactttgtctccttcattttc
ctctgctccttcctgatgctgaacctatttgttgctgtcatcatggataactttgagtac
ctaaccagggacgcctccatcctggggcctcatcaccttgatgaatttatccgcgtgtgg
gcggagtacgaccctgctgcctgcgggaggatatgctatcaggatatgtacaaattgttg
cgttttatctcgcctcccctgggccttgggaagaagtgccctaacagggtggcttataag
cgattggttaagatgaacatgcccatcgccgatgacaacacagtgcatttcacctccacg
ctgatggccctgatccgcacagccctggagatcaaactggcatctggggtcctggcgcag
catttgtgtgacgtcgacctgaagagggagataaaccgagtttggcccagcctatcgcag
aagacggtcgacctgctggtgacgccacataaatacaatgagctgactgtggggaaagtc
tacgctgctctaatgatctttgactactataagcagaatcgtgccaagaggctccagcag
cagaacccttcaacaggacctacaagtaaactgggggccttgttccgtcctgtgctgccc
ctcactaacatacaggaagtggaaccgccattccccagtcccaaatggcccatgccaccc
aaacctgagccagaagccaagtcagaggctgtgcccacaaccaccgctccactgaggagt
gccataaaacattcccagtctggagatgtttctcaggcagcactgaggcccaaaggccgg
aggaaactacagagaggccaatcagaggatgtgccatattccaccagacctcaggaatcg
gttgagatgaagaaggtggagaatatctcagacacagaggaatatcccaacctggaaggc
cactgcagagcagcgtctctgccccgactcaatgctgagtactaccggagccaccctcgc
cacgcccctgggacccacctggcaccgattgtggacctcagtcctataagacgctcggca
tcctctctgacgcctcagtaccaccaggagggcgggctgagggaatataacctggaaaga
ccagacctggcccagtcctccagcgagtcagggcaagtccagggccaggacagggctcac
caccatcaccaccaccaccgatgccatcgacgcagggacaaagacaaagacaagaagcag
aagtccctggacagagctgcatcagtgcagccgtccagcactgtcgctgaaggtttgtcc
agagagcgagcgagggagcgggaccgcagccgacctcacgagaggaggcaccactcctca
gcaggagagaagcagcgttattactcctgcgagcgttacggcagcagggagcagtgccac
gccaagtcagccggtcccagtcgatccacgtctccaggagagggacccgacaccgttttc
ctcaaacagcatggcagcggcgtgattaaagccgtccccgtgacgctgccgtctggttcc
agcacacccggccgtggtcgcaggcagctccctcagacgcccctcacccctcgtcccgct
gtggcctacaagaccgccaactcctcgcccctcccgtccggtgccagcaccgctacgacg
gggcaccagactcgtttcagccgtggcctttcagagcacgagcgcttagtcgggggctac
gacgagtccccgataccggtcacccgcatcggttcagaccctaatttaaaccggcagccg
aaggacgcttctcagcaggccctcctagaagaggcggaggactttcaggacgctgtgagc
agccacggagggggggcgcgctctgccagaacaacctcagctacggcctcggctacacac
ggaactgccgctgcgcccgtcacagtgccaaccactcaaggccgggcgggggtggtgcct
aacgggtaccacttcacccttggggttaactctgcatctgggagcagaggaacagggagt
ctccgggagagggatgaagaggactggtgctaa
DBGET
integrated database retrieval system
