Scomber japonicus (chub mackerel): 128380507
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Entry
128380507 CDS
T09718
Name
(RefSeq) basic helix-loop-helix ARNT-like protein 1
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128380507
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
128380507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
Per3-like_PAS-A
PAS_9
bHLH_NCOA
PAS_2
bHLH_INO2
TGase_elicitor
Motif
Other DBs
NCBI-GeneID:
128380507
NCBI-ProteinID:
XP_053196363
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Position
1:complement(22788324..22792737)
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AA seq
419 aa
AA seq
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MSRFMSSRSTNLISSSTGTSSKNLSRKRKVSSAVYQLQYHDQPGHDKNAREAHSQTEKRR
RDKMNSFIDELASLVPTCNTKSRKPDKLSVLRMAVQHMKTLQSSTAKLHTDVNHKPTFLS
EEELKHLILRAADGFLFVVDCDRGKILFVSESVDNILNYSKNDLIGQSLFDYLHPKDIAK
VKEQLTSADITPGERCIHAKCGLSVKTDMNSCSLRLCSGVRRSFFCRMKCNRSLLNKDED
DFSSTCLKKNEEHKGFCTIHNTGYLKSWSPAEVDLDENNQLDIDGCHSSCLVAVGRLHPH
TVSQPALYDIKVKPMEFVSRHAIDGKFVFVDQRATAILAYLPQELLGTSFYEYCHEDDIA
HLAECHWQVLQMRKRINTKCYKLKIKNGSFITLRSHWFSFLNPWTKEVEYIVSTNTVVT
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgagcaggtttatgtcctcacgatcaaccaacctgatcagcagctcaactggcacaagc
agcaagaacctgtctcgcaaaaggaaagtcagctctgcagtataccagctgcagtaccat
gatcagccaggccacgataagaatgccagggaggctcacagtcagacagagaaacgacgc
agggataagatgaacagcttcatagatgagttggcttcattagtgcctacatgcaacact
aaatcccgcaaaccggacaaactctcagtcttgcgaatggcagtccaacacatgaagact
ttacaaagttctactgccaaacttcacacagacgttaaccacaaacctacattcctatct
gaggaggagctaaaacacttaatcctgagggcagctgatggctttctgtttgttgttgat
tgtgatcgaggaaaaatactgtttgtttctgaatcagtggacaatatcctaaattatagc
aagaatgacctgattggccagagcctgtttgattacttgcatcctaaagacattgcaaaa
gtcaaggagcaactgacttcagctgatatcacaccaggagagagatgcatccatgcaaaa
tgtggtctttcagtgaaaactgacatgaactcatgctctttgagactttgttctggggtg
agacgctcatttttctgcaggatgaagtgcaaccgatccctgctaaataaggacgaggat
gatttttcctccacctgcctgaaaaaaaatgaggagcataagggcttctgcaccattcat
aacactgggtacttaaaaagctggtctcctgctgaggtggatctggatgaaaataaccag
cttgacattgacggatgtcactcaagctgtctggtggctgttggccggttgcatccccac
actgtttctcagccagcactgtatgacatcaaggtcaagccgatggagttcgtttcacgt
catgctattgatgggaagtttgtctttgtagatcaaagggccactgctattttggcttac
cttcctcaagagctgctgggaacgtccttttatgaatactgtcatgaagatgacattgcc
catttagcagaatgtcactggcaagtgctgcagatgagaaagaggatcaatacgaagtgc
tacaaattgaaaataaaaaatggctcatttatcacacttagaagtcactggttcagtttc
ttaaatccctggacaaaagaggtggagtacattgtctccaccaacactgtagtcacgtaa
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