Scomber japonicus (chub mackerel): 128380689
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Entry
128380689 CDS
T09718
Name
(RefSeq) LOW QUALITY PROTEIN: ras-specific guanine nucleotide-releasing factor 2-like
KO
K12326
Ras-specific guanine nucleotide-releasing factor 2
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128380689
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RhoGEF
PH
RasGEF_N
SOS1_NGEF_PH
PH_11
IQ
PH_16
FkbH_N
DUF2443
Csm1_N
Motif
Other DBs
NCBI-GeneID:
128380689
NCBI-ProteinID:
XP_053196530
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Position
19:27814259..27880323
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AA seq
1325 aa
AA seq
DB search
MQKSVRYNEGHALHLSVVARKEGTKRGFLSKKTTENSRWAEKYFALYQNVLFYFENDQSA
RPSGIYLLEGCTCERAPASKVSAISKEPMEKQQHYFLVIFGHDGQKPLELRTEEESDCNE
WVEFIQQASYSDIIIEREILMQKYIHLVQIMETEKVAANQLRTQLEDQDTEIERLKAEIV
VLNKAKERLLPYQNNQEEEDPDIKKIKKVQSFMRGWLCRRKWKIIVQDYISSPHAESMRK
RNQIVFNMVEAETEYVHQLSILVNCFLRPLRMAASSKKPPISHDDVSSIFLNSETIMFLH
EIFHQGLKARIANWPTLVLADLFDILLPMLNIYQEFVRNHQYSLQVLANCKQNRDFDKLL
KQYESNAACEGRMLETFLTYPMFQIPRYIITLHELLAHTPHEHVERKSLEFAKSKLEELS
KMMHDEVSDTENIRKNLAIERMIVEGCDILLDTSQTFVRQGSLIQLPSSSERGMLSKVRL
GSLSLRKEGERQCFLFTKHFLICNRTSGGKLHLLKQGGALSLIECTLIEELDASDEDYNA
AGQGFNHLEFKIVVEPPDGQPFSVVLLAPSRQEKAAWTSDISQCIDNIRCNGLMSSVFEE
NSKVSVPHMIKSDTRLHKDDVDICFSKTLNSCKVPQIRYASVERLLERLTDLRFLSIDFL
NTFLHTYRIFTTAAVVIDKLAVIYRKPFTSIPVRVEQLSCDRLSIMSLCPDYSLKITRLA
LDQTKSLELFFATNQGGTWGSDPLNNKSPRLCRKFSSPPPLSIPSRTSSPVHSRKLSLSS
PINSKAGALDLSTTPSSSAANSPTSTHCPSISSPPPNSTRPPSGFSSPPPTATRSPSFPH
TSSGVSSPPPTSTKAPLDLSRGPSSPELIPAAAAAVTEDVSGDLPRIDAFCGKLRRSIRR
AVLESVSLDKFIPEAPASSEPGDMSPCRSPSTPRHLRYRQAGVTSGENSRCTMSPASAFA
IATAAAGHSSSQSFSNSEKSCDKEFIIRRAATNRVLNVLRHWVSKHSQDFEMNSELKMGV
IGLLEEVLRDPDLMPQERKATSNILSALSQDEQDDAQLKIEDILQMKSCPLLHFLXGESP
KAECFESLSAMELAEQITLLDHIVFRSIPYEEFLGQGWMKVDKSERTPYIMKTSQHFNDM
SNLVASQIMTHTDVGSRASSIEKWLAVADICRCLNNYNGVLEITSALNRSAIYRLKKTWA
KVCKQTKALMDRLQKTVSSEGRFKNLRETLKNCNPPCVPYLGMYLTDLAFIEEGTPNFTE
EGLVNFSKMRMISHIIREIRQFQQAPYRIEHQPKVTQFLLDKTLVMDEDTLYELSLKIEP
RVPPG
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagagcgtgcgctacaatgagggccacgcgctgcatctgtctgtggttgcccgg
aaagaaggcaccaaacgcggcttcctgagcaagaagacgacggagaacagccgctgggca
gagaagtacttcgcgctctaccagaacgtgctcttctacttcgaaaacgaccagagcgcg
agaccctctggaatctacctgctcgagggatgcacgtgcgagagggcaccggcgtccaaa
gtctccgccatcagcaaggagccaatggagaaacagcagcactacttcctggtgatcttt
ggccacgacggacagaaacctctggagctgcgaaccgaggaggagtcagactgtaatgaa
tgggtggagttcatccagcaggccagttactctgacatcatcatcgagcgtgagatcctg
atgcagaaatacatccacctggttcagatcatggagacggagaaggtcgcagccaatcag
ctccgcactcagctggaggaccaggacactgagatcgagaggcttaaagccgagattgta
gtgttgaacaaagccaaggaacggctgctgccttaccagaacaaccaagaggaggaagac
cccgatattaaaaagatcaaaaaggtgcagagtttcatgcgtggctggttgtgtcggagg
aagtggaagatcatcgtccaggactacatctcctctcctcacgccgagagcatgaggaag
aggaaccagatcgtcttcaacatggtggaggcggagaccgagtacgtccaccagctctcc
atcctggtcaactgcttcctccggccgctccgcatggccgccagctccaagaaacctccc
atcagccacgatgacgtcagcagcatcttcctcaacagtgagaccatcatgtttctgcat
gaaatcttccaccaaggtcttaaagctcggatcgctaactggccgacgctggttctggcg
gacctgtttgacatcctgctgcccatgctgaacatctaccaggagtttgtgaggaaccat
cagtacagcctgcaggttctggccaactgtaagcagaaccgagacttcgataaactgctc
aaacagtacgagtccaacgccgcctgcgagggacgcatgctggagaccttcctcacttac
cccatgttccagatccctcgatacatcatcacgctccacgagctgctggcacacacacct
cacgagcatgtggagcggaagagcctcgagttcgccaaatccaaactggaggagctgtca
aagatgatgcacgatgaagtgagcgacacggagaacatcaggaagaatctggccatagag
aggatgatcgtagaaggctgcgacatcctgctggacaccagtcagacgtttgtcagacaa
ggctctctcatccagctgccgtccagcagcgagcggggcatgctcagtaaggtgcgtctg
ggctcgctctctctgaggaaggaaggagagcggcagtgcttcctgttcaccaaacacttc
ctcatctgtaaccgaacatctggagggaagcttcacctgctgaagcaaggaggagcgtta
tctctgatcgagtgtactctgatagaagagctcgatgccagcgatgaagactacaacgca
gcgggtcagggcttcaaccatctggagtttaaaatcgtggtggagcctcccgatggtcag
cctttctccgtcgtcctcttggctccgtcacgccaggagaaagccgcctggaccagtgac
atcagccagtgcattgataatatccgatgtaacggtctgatgtccagcgtgtttgaggag
aactccaaagtttctgtgccgcatatgatcaaatccgacacccggctgcacaaagacgac
gtggacatctgcttcagtaagactctgaactcctgcaaagtgccgcagatccgctacgcc
agcgtggagcgtctgctggagcgtctcaccgacctccgcttcctctccatcgacttcctc
aacaccttcctgcacacctacaggatcttcaccaccgccgccgtcgtcatcgacaagctg
gccgtcatctacaggaagccgttcacctccatacctgtcagggtcgaacagctttcatgt
gaccgtctgtccatcatgtccctctgtcccgactacagtctgaagatcacgcggctcgct
ctcgaccagactaagtctctggagctcttcttcgccaccaaccaggggggcacgtgggga
tccgaccctttaaacaacaaatccccgaggttgtgccgcaagttttcctctcctcctcct
ctctccatcccctcccgcacctcctcccccgtccacagccgcaagctctccctcagctcc
cctataaattccaaagcaggagccttagacctctccaccaccccttcctcctccgcggcc
aactcccccacctccactcactgcccctccatctcctctccgcctcccaactccaccagg
cctccgtctggtttctcctctcctcctccgaccgccacacgctccccaagcttcccacac
acctcttcgggggtgtcgtctccgccccccacctccactaaagcccctctggacctcagc
cgtggtcccagctccccggagctcatcccagcagcggcggcggcggtgacggaggacgtc
agcggggatttgcctcgcatcgacgctttctgtgggaagctgaggcgaagcatccgcaga
gctgttctggagtcagtttctctggataagtttattcctgaagctccagccagcagcgag
ccgggcgacatgtctccctgccgctctccgtccacgccgaggcacctccgctacagacag
gcgggagtcacgtcgggggaaaactctcgctgcacgatgtcgcccgcttcagcgttcgcc
atcgccactgctgccgcgggacacagcagctcccagagtttcagtaattcagagaaatcc
tgcgacaaagaattcatcatccgcagagcagcgaccaaccgagtcctcaacgtgctgcga
cactgggtctccaaacactcccaggactttgagatgaacagcgagctgaagatgggagtg
atcgggttgttagaggaagtgctccgagatccagacctgatgccccaagagaggaaagct
acatctaacatactaagtgccctttctcaggacgaacaagacgacgctcagctgaagata
gaagacatattacagatgaaaagctgtccgctgctacactttttgtagggggagagtccc
aaagcggagtgttttgagtctctgtcggccatggagctggcagaacagatcacactactg
gatcacattgtgttcaggagtattccctatgaagagttcctgggtcagggctggatgaag
gtcgacaagtctgagagaacgccgtacatcatgaaaaccagccagcacttcaatgatatg
agtaacctggtggcgtctcagatcatgactcatactgacgtgggctccagagccagctcc
atagagaagtggctggcggtggccgatatctgccgctgcctcaacaactacaacggtgtg
ctggagatcacctccgccctcaaccgcagcgccatctacaggctgaagaagacctgggcc
aaagtctgcaaacagacgaaggcgctcatggaccggctgcagaagaccgtttcatcagag
ggaaggttcaagaatctcagagagacgctgaaaaactgtaaccctccatgtgtcccgtac
ctgggcatgtacctcactgacctggctttcattgaagagggaacgcccaacttcactgag
gagggcttggtcaacttctccaagatgaggatgatttctcatattattcgtgagattcgt
cagttccagcaagcaccttacaggatagagcaccaacccaaggtgactcagttcctcttg
gataaaacgctggtgatggacgaagatactctctatgagctctcactgaagatcgaacct
cgagtaccacctggctaa
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