Scomber japonicus (chub mackerel): 128380698
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Entry
128380698 CDS
T09718
Name
(RefSeq) LOW QUALITY PROTEIN: occludin-like
KO
K06088
occludin
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03272
Virion - Hepatitis viruses
sjo04514
Cell adhesion molecules
sjo04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
128380698
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128380698
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
128380698
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sjo01009
]
128380698
Protein phosphatases and associated proteins [BR:
sjo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128380698
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Occludin_ELL
MARVEL
SUR7
YldA
Syntaxin
EBP
DUF2070
Motif
Other DBs
NCBI-GeneID:
128380698
NCBI-ProteinID:
XP_053196541
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All DBs
Position
19:27779946..27794155
Genome browser
AA seq
496 aa
AA seq
DB search
MSSRPNGSPPPYESDGYNVPPPQPAYSYYPDDEFQHFYRWTSPPGILKIMSVITLVLCLA
IFACVASTLAWDSQGALGGFGGGGYGGGGYGGGGYGGYGSFGGGGYGAGNNYGYGSLGGN
YNDPRAGKGFIIAMATFTFIFALVVFIIIVSHQSLTESRRFYLAVLIVSAILALLMLIAS
IVYLVAVNPMAQSSGSAYGSQIAGLCAQYQRPQPSGVFVNQYLYHYCVVEPQEAIAIVCG
FLVTAALIIMLVFALKTRQKIQNYGKSNILWKKVKIIDDMEPPQDVEAWVNNVSVPAEEV
PMAAYPEKLRGSRSHLDDESNYDKPPYSYTPQPASEEERPLQNGGPYSSHSEAPSSAGRP
KKRRAGRPRRVDGEGYDTDYNSSGDELDDDDFFSEFPPITNEQDRNSYKREFDRDHLEYK
DMQAELDAINRKLAEVDRELDDLQEGSPQYLDAMDEYSRIKAMKRSADYQMKKRRCKYLK
GKLNHIKKMVGDYDRA
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgaggcccaacgggagtccacctccctacgagtcagacggatacaacgtccct
cctcctcagccggcgtactcttactaccccgacgatgagttccagcatttctaccgctgg
acgtctccgcctggaatcctcaaaatcatgtccgtcatcacgttggtgctgtgcttggcc
atattcgcctgcgtagcctccaccttggcgtgggactctcagggggcgttgggcggcttc
ggcggcggcggatacggcgggggcggatacggcggcggaggctacggtggctacggcagc
ttcggcggcggcggctacggagcgggaaacaactacggctacggcagcctcggagggaac
tacaacgaccccagagccgggaaaggcttcatcatcgccatggcaaccttcactttcatc
ttcgccctggtcgtcttcatcatcatcgtgtctcaccagagcctgacggagagccggagg
ttctacctggccgtgctgatcgtgtcggccatcttggctctgctgatgctcatcgcgtcc
atcgtgtacttggtggcggtgaacccgatggcgcagtcgtccggttcggcctacgggagt
cagatcgccggactttgtgctcagtaccaacgaccgcaaccgtcgggagtgtttgtgaat
cagtatctctaccactactgcgtcgtcgagcctcaagaggccatcgccatcgtgtgcggt
ttcctggtgacggcggcgctcatcatcatgctcgtcttcgctctgaagactcgccaaaag
atccaaaactacggcaagagcaacattttgtggaagaaggtgaagatcatcgacgacatg
gagcctcctcaggacgtagaggcgtgggtgaacaatgtgtccgtcccggccgaggaagtc
ccgatggcagcataccccgagaagctgagaggctccaggagtcacctagacgacgagagc
aactacgacaaacctccgtacagctacacaccgcagcctgcatcagaggaggaaaggcct
ctgcagaacggaggtccgtacagcagtcactcggaggctccgagctccgcaggaagaccc
aaaaagaggcgtgcgggtcgacctcgccgcgtcgacggagaaggttacgacacggactac
aactcctctggagacgagctggacgatgacgacttcttcagtgaatttcctccgatcacc
aacgagcaggaccgtaacagctacaagcgcgagttcgaccgcgaccacctggagtacaaa
gacatgcaggcggagctggacgccatcaacaggaagttggcagaggtcgacagagagctg
gatgacctgcaggaaggaagtcctcagtacctggatgcgatggacgagtacagcaggata
aaagccatgaaacggtctgcagactaccagatgaagaagcgtcgctgtaaatatctgaag
gggaaactgaaccacatcaagaagatggtcggcgactacgaccgagcctga
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