Scomber japonicus (chub mackerel): 128380714
Help
Entry
128380714 CDS
T09718
Symbol
sart1
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
KO
K11984
U4/U6.U5 tri-snRNP-associated protein 1
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128380714 (sart1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sjo03041
]
128380714 (sart1)
04121 Ubiquitin system [BR:
sjo04121
]
128380714 (sart1)
Spliceosome [BR:
sjo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
128380714 (sart1)
Complex C
U4/U6.U5 tri-SnRNP specific factors
128380714 (sart1)
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128380714 (sart1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SART-1
HIND
Motif
Other DBs
NCBI-GeneID:
128380714
NCBI-ProteinID:
XP_053196562
LinkDB
All DBs
Position
2:14605946..14608792
Genome browser
AA seq
776 aa
AA seq
DB search
MGSSKKHKEKSRDKDTEERRREHKKHRHKDRERDREASDRDGTRGKEKRKRSGSRERSGR
DSRSKGERSSGEPRVKKEKVDLAYEESNTTEVEPQSASGDVSLSIEETNKLRAKLGLKPL
ELNQTKKELGTKEDPVVAETINPVLIKKQKDMKEKLAALKEKRIQNQKLGKVKSLADDDW
LDDTAAWVEKSRKLAKEKEMAEKRAKLLQEMDEEFGVSSLVEEEFGQSKREAYTSGDLKG
LKVQHKVESFNEGQTVILTLEDKGVLAEEEDVLINVGLVDKEKAEKNVELKKKKPEYKPY
EEEESVDDMVTFKSHSVLSKYDEEIDGEKKKSFRLNTGGFADGERERELQAIKEALRNQA
QSLEMPSLQIASEYYTPQEMVGFKKTKRRVKKIRKKEKQINAADELLDDTRCTDFGSRSR
GRGRKQVEDDIEEVKEEESVVPNVVPQMSDDIRMAEMDISDDEDFTLPESAAIEEDEAEQ
ELQKQLEKQRKLKQKQLLKDSGEKVAEQIKVLSKEDQDNDPEKKNNIVFNATSEFCRTLG
DIPTYGLSGNREDQEDIMDFEQEEEKDDAGNSDSDMDENVGWSMVNLDEEQKQPDFSTAS
ATILDEEPIVNSGLAAALLLCKNKGLLDTQMQKVARVRAPKGALPNDNYCIEDKMGFDDK
YSRREEYRGFTQDFKEKDSYKPDVKIEYVDESGRKLTPKEAFRQLSHRFHGKGSGKMKTE
RRMKKLEEEALLKKMSSSDTPLGTVALLQEKQKSQKTPYIVLSGSGKSMNANTITK
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgggttcctccaagaagcataaggaaaagagccgtgacaaggacaccgaggagcgccgc
cgtgaacacaagaaacatcgccacaaggaccgagagagagacagagaagcttcagaccgg
gatgggactcggggtaaagagaaacgaaaacgctccgggtccagggaaagaagtgggcga
gatagccgcagcaaaggcgaaaggagcagcggggagccacgggtgaagaaggagaaagtt
gatcttgcatatgaggaaagtaatactacagaagtggagcctcagtctgcaagcggagat
gtgtcgctcagcattgaggagaccaacaaactcagagccaaactgggtctgaaacccctg
gagttaaatcagaccaaaaaggagcttggcaccaaagaggaccctgttgtggctgagact
atcaacccagttcttatcaagaagcagaaagatatgaaggagaagctggcagctttgaaa
gagaaacgcatccaaaaccagaaattgggaaaagtcaagtccctagcagatgacgactgg
ctggatgacactgccgcttgggtggaaaaaagccggaagttggccaaagaaaaagaaatg
gcagagaaaagagccaaacttctgcaagagatggatgaggagttcggtgtcagcagtctg
gtcgaggaggagttcggacaaagcaagagggaagcctatacatctggagatctgaaagga
ctcaaagtgcagcacaaggtggaatcctttaatgagggccagactgtcatcctgacactg
gaagacaaaggagtgctcgcagaggaggaagacgttctcataaatgtgggactggttgac
aaggaaaaggccgaaaagaatgtggagttaaaaaagaaaaagccagagtacaagccctat
gaagaagaggagagtgtggacgacatggttacgtttaagtcccactctgtgctgtcaaag
tatgatgaggagattgatggcgaaaagaaaaagagcttccgactgaatacagggggcttt
gctgatggagagcgagagcgggagctccaggccataaaagaagctctacgaaatcaggcc
cagtccttggaaatgccctctctccagatcgcgtctgagtactacacacctcaggaaatg
gtcggctttaaaaaaacaaaacgccgtgtgaagaagataagaaagaaggagaagcagata
aatgcagctgatgaactcctcgatgacactcggtgtactgatttcggctccaggtcacgt
ggcagaggccgcaaacaggtggaagacgacattgaggaagtcaaggaagaggaaagcgta
gtgccaaatgttgtcccccaaatgtctgatgacatcaggatggctgaaatggacataagt
gatgacgaagacttcacacttcctgagtctgctgcgattgaggaggacgaggcagagcag
gagctgcagaaacaactggagaagcagaggaagctaaagcaaaagcagcttctcaaagac
tctggggagaaggtggcagagcagattaaagttcttagtaaagaggaccaagacaatgat
cctgagaagaagaacaacattgttttcaacgccacctctgagttttgcagaactctgggt
gacattccaacatacggcctgtcaggcaacagagaggaccaagaggacattatggatttt
gaacaagaggaagagaaagatgatgctggaaattcagactcggatatggatgagaatgtc
ggatggagcatggttaacttggatgaagagcagaaacaaccagatttctccacagcctct
gccaccattttggatgaagagcccattgtcaactctgggcttgctgctgccttgctgttg
tgcaaaaacaaaggtcttttggacactcaaatgcaaaaggttgcccgtgtcagagcacca
aagggtgccctgcccaatgacaactactgcatcgaggacaagatgggctttgatgacaag
tacagtcgcagagaagaatacagaggcttcacccaagatttcaaggagaaggatagctat
aaacctgacgtcaaaattgagtatgtggatgagtctgggcggaaactgaccccaaaagaa
gctttcaggcagctttcacatcgcttccatggaaaaggctctggaaagatgaaaacagag
aggaggatgaaaaagcttgaggaggaggcactgctgaagaagatgagcagcagcgatact
cctctagggacggtggctctgcttcaagagaaacagaaatcccagaaaacaccatacatt
gtgcttagtgggagtgggaaaagtatgaatgccaacaccattactaaataa
DBGET
integrated database retrieval system
