Scomber japonicus (chub mackerel): 128380778
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Entry
128380778 CDS
T09718
Name
(RefSeq) unconventional myosin-Vb-like
KO
K10357
myosin V
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
128380778
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sjo03019
]
128380778
04131 Membrane trafficking [BR:
sjo04131
]
128380778
03029 Mitochondrial biogenesis [BR:
sjo03029
]
128380778
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sjo04812
]
128380778
Messenger RNA biogenesis [BR:
sjo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
128380778
mRNA cycle factors
P-body specific factors
128380778
Membrane trafficking [BR:
sjo04131
]
Others
Actin-binding proteins
Myosins
128380778
Mitochondrial biogenesis [BR:
sjo03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
128380778
Cytoskeleton proteins [BR:
sjo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
128380778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
AAA_16
Myosin_N
AAA_22
Ac76
nSTAND3
Motif
Other DBs
NCBI-GeneID:
128380778
NCBI-ProteinID:
XP_053196652
LinkDB
All DBs
Position
19:complement(32773673..32819502)
Genome browser
AA seq
1806 aa
AA seq
DB search
MSVNELFTKFTRVWIPDPEDVWRSAEISRDYKEGESVLHLKLEDETPLEYSVGQKSNPLP
FLRNPDILVGENDLTALSYLHEPAVLHNLRVRFLESNNIYTYCGIVLVAINPYEQLQIYG
EEVINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRFF
ATVGGSANDTNVEEKVLASSPIMEAIGNAKTTRNDNSSRFGKYIQIGFSRHYHIIGANMR
TYLLEKSRVVFQAEDERNYHIFYQLCASASLPEFKELSLTSAEDFTYTSLGENIFIDGVN
DAEDFQKTREAFTLLGIKESSQSSIFKIMASILHLGNIQICSERDGESCRISRDDIHLQA
FSRLLGVEQQQMEHWLCHRKLVTASETYVKNMSSHQAANARDALAKHIYAHMFDWIVEHI
NKALHTSSKQHSFIGVLDIYGFETFESNSFEQFCINYANEKLQQQFNSHVFKLEQEEYMK
EQIPWTLIDFYDNQPCIDLIEARLGILDLLDEECKVPKGTDQNWAQKLYKQHSSSAHFQK
PRMSNTSFIINHFADKVEYQCEGFLEKNRDTVYEEQINILKASQFQLVADLFHDKDDVVS
SKSSRVNVRAAKSVPKTPNREHRKTVGLQFRSSLNLLMETLNATTPHYVRCIKPNDLKEA
FSFDSSRAVQQLRACGVLETIRISAAGYPSRWTYPDFFSRYRVLMKKSDVTSPDKKLVCR
NLLETVVKEPDMFQFGKTKIFFRAGQVAYLEKLRADKFRAACIKIQKTVRGWLQRVRYTK
IRRSALILQRYGRGYLARRLAEQLRRSRAALICQKQFRMVRDRRAFLRVRSAVVTIQAFT
RGMFTRRIYHEFLLHHRAMIIQKCVRGWLQRRKFRRARDAAVTLQCAYRRVLAKRRLQQL
KIEARSAEHLKKLNTGMENKIVQLYTQSKELRSQNDQLMVTNSSLGSEVTKLQEQLEHLR
SHQDEGQLTSLQEELQRLREELQEAHAFRKKLQEEHSTEKLQLQERVEELQTENSLLKTE
KENMNQKILQQSKSIEEDDSSVSQREVSLQSELDADRQRYQNLLKEFSRMEQRYDNLKEE
LSLTKFHPGHRRNPSNQSSLESDSNYPSISTSEVGDTEDSIQLVEEMGVEKAAMDISLFM
KLQKRVRELEQERKRLQANADQMEEAAKRKGSEVRSPSSEQETADLAYDNLKRQELESEN
KKLKNDLNELRKTMADRVSQNGSSNELQDGYNVLLSQLRAANEELDARKEEVLILRTQIV
SVAQQQERSEHISNDTEPVDKDEALKAYHGLSESKKLLEAQLQSQSRQHKDELEALHTQI
ELLKADIEKKQEILNYTMSLSPEAQVEYSVQQEITRLTNDNLDLKELVEKLEKNERKLKK
QLRIYMKKVQELEVSQAAVQASRSNPELTRQVTVQRKEKDFEGMLEYNKEDEALLVKNLI
ADIRPNSVSATVPCLPAYILFMCIRHADYINDDQKVAALLTSTINAIKKVLKKNNDDFEM
TSFWLANTSRLLHCLKQYSGDEVFMTQNTSKQNEHCLKNFDLAEYRQVLSDLSIQIYQQL
IKVAESIIQPMIVSSMLESESIPSLAGVKPMGYRNRSSSMDTDGGGPNSYTLEALIRQLG
QFHAIMSEHGLDPEIVGQVVRQLFNCINAVTLNNLLLRKDVCSWSTGMQLRYNTSQMEEW
LRGNNLYQSKTAATLEPIIQAAQLLQVKKKTSQDAEAICSLCTSLTTQQIVKILNLYTPL
NEFEERVTVAFIRNIQSRLQERNDPPTLLLDTKQTFPVLFPYTPSALSLDTLHIPASLSL
NFLIRV
NT seq
5421 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgaacgagctcttcactaagttcacccgggtgtggatccccgacccggaggat
gtctggaggtctgcagagatcagcagagactacaaggagggagagtctgtgctgcacctt
aaactggaggatgaaacgcctctggagtactcggtgggtcagaagtcgaaccctctgccg
ttcctgcgtaacccggacatcctggtgggagagaacgacctcaccgctctgagctacctg
cacgaaccggccgtcctgcacaacctcagggtccgcttcctggagtccaacaacatctac
acatactgcggcatcgtgctggtagccattaacccctatgagcagctgcagatctacggt
gaggaggtgatcaacgcctacagcggacagaacatgggagacatggatcctcatatattc
gctgtggctgaagaagcctacaagcagatggccagggacgagaggaatcagtctatcatc
gtgagcggagagtctggagcaggaaagacggtttctgctaagtacgcgatgcgtttcttt
gctacagtcggcggttcggccaacgacaccaacgtggaggagaaggtcctcgcctccagc
cccatcatggaggcgatcggaaacgctaaaacgactcggaacgacaacagcagtcgcttc
gggaagtacatccagatcggattcagccgccattatcacatcatcggagccaacatgcgc
acttacctgctggagaagtcccgcgtcgtcttccaggctgaagatgaaaggaattaccac
atcttctaccagctgtgtgcctccgcctccttaccagagttcaaggagctcagcctcacc
agcgctgaagacttcacctacacgtctctgggtgagaacatcttcatcgatggagtgaac
gacgctgaagactttcagaagaccagagaagcatttacactgctggggattaaagagagc
agtcagagcagcatatttaagatcatggcctccatccttcatctgggaaacattcagatc
tgctccgagagagacggagagtcctgtcgcatctcaagagatgacatccacctgcaggcg
ttcagccggctgctgggggtggagcagcagcagatggagcactggttgtgtcacaggaag
ttggtgacggcgtctgagacgtacgtgaagaacatgtcgagtcatcaggcggcgaacgct
cgcgacgcgctcgccaaacacatctacgctcacatgttcgactggatcgtggagcacatc
aacaaagccctgcacacctcctccaagcagcactccttcatcggggtcctcgacatctac
gggtttgagacgttcgagagcaacagcttcgagcagttctgcatcaactacgccaacgag
aagcttcagcagcagtttaactctcatgtgtttaagttggagcaggaggagtacatgaag
gagcagattccctggacgctgatcgacttctatgataaccagccgtgcatcgacctgatc
gaggctcggctcggcatcctggacctgctggacgaagagtgcaaagtgccaaagggaacg
gatcagaactgggcccagaagctctacaagcagcactcgagcagcgctcacttccagaaa
cctcgaatgtccaacacgtccttcatcatcaatcacttcgctgataaggtggagtatcag
tgtgaaggtttcctggagaagaacagagacactgtgtacgaggaacagatcaacatcctg
aaggccagccagtttcagctggtagcagatctgtttcatgacaaagacgacgtcgtttct
tcaaagtcgtcgagagtcaacgtccgagcagcgaagtctgttcccaaaactccaaacaga
gaacatcgcaagactgtcggactgcagtttcgcagctctctgaatcttctcatggagacg
ttgaacgctacaacgccgcactacgtccgctgcatcaaacccaacgacctgaaggaagcg
ttctcgtttgactccagccgggcggtgcagcagctcagagcctgtggagtcctggagacg
atccgcatcagtgctgctggatacccgtccaggtggacatatccagacttcttcagcagg
tatcgagtcctgatgaagaaatctgacgtcacgtctccagataagaagctcgtctgtaga
aacctgctggagactgtggtgaaggagccagacatgttccagttcggtaagacgaagatc
ttcttccgggccggtcaggtggcgtatctggagaaactccgagctgataagtttcgagcc
gcttgtataaagatccagaagacggtgagaggctggctgcagagagtccgctacaccaag
atacgcaggtctgccctcatcctgcagagatacggccgagggtacctggcacgcaggttg
gcggagcagctgcggcggagtcgagccgctctcatctgtcagaaacagttccgcatggtg
agagacagacgagccttcctgagggtgaggagcgccgtggttaccatccaggccttcacc
aggggcatgttcacccgccgcatctaccacgagttccttcttcaccaccgagccatgatc
atccagaagtgtgtgcgcggctggctgcagcgcaggaagttcagacgtgcacgtgacgcc
gccgtgacgctgcagtgcgcctacagacgcgtgctcgctaagagacgactgcagcagctg
aagatagaagctcgctctgctgaacacctgaagaagctcaacacgggcatggagaacaag
atcgtccagctctacacacagagtaaagagctgaggagtcagaacgatcagctgatggtg
actaacagcagtctggggtcagaggtcaccaagctgcaggaacagctggaacatctgcgc
agtcaccaggacgaaggtcagctgacgtcgctgcaggaggagctgcagaggctgcgggag
gagctgcaggaggcgcacgctttcaggaagaagctgcaggaggagcacagcacagagaag
ctgcagctgcaggagagagtggaggagctgcagactgaaaactctctgctgaagacggag
aaggaaaacatgaaccagaagatcctgcagcagtcaaagagcatcgaagaagatgacagc
agtgtgtctcagagagaagtgtctctacagtcagagttggatgctgaccggcagcgttat
cagaatctcctcaaagagttttccagaatggagcaaagatacgacaacctgaaggaggag
ctgtctctcaccaagttccacccgggtcacaggaggaacccgtccaatcagagcagcctg
gagtcggattccaactacccgtccatctccacgtcagaggtgggagacacggaggactcc
atccagctggtggaggagatgggagtagagaaagcagccatggacatcagtctgttcatg
aagctgcagaagagagtcagagagctggagcaggagaggaagagactgcaggccaacgca
gaccagatggaggaggccgccaagcgcaagggctctgaggtgaggagtccttcctctgag
caggagactgcagacctggcctacgacaacctgaagagacaggagctggagtcagagaac
aagaagctgaagaacgacctgaacgagctgaggaagacgatggcggaccgcgtgtcacag
aacggctcgtccaatgagctacaggacggctacaacgtcctgttgagtcagctccgagca
gccaatgaggagctcgacgcccggaaggaggaagtcctgattctgaggacgcagatcgtc
agcgttgcccagcaacaagagaggagcgaacatataagtaacgacacagaacccgtcgat
aaagacgaagctctcaaagcttatcatggactgtctgagtccaagaagctgctggaggct
cagctgcagtctcagtcccggcagcacaaagatgagttggaggctcttcacactcagatc
gagctgctgaaggccgacatcgagaagaagcaggagatcctgaactacaccatgtctctg
tctccggaggcgcaggtggagtacagcgtccagcaggagatcacccgcctcaccaacgac
aacctggacctcaaggagctggtggagaaactggagaagaacgagaggaagctgaagaag
cagctccggatctacatgaagaaagtccaggagctggaagtgtctcaggcagcagttcag
gccagcaggtctaaccctgagctgacccgccaggtgaccgtccagcgtaaggagaaggac
tttgaggggatgttggagtacaacaaggaggacgaagctctgctggtcaagaacctcatc
gcagacatcagaccgaactctgtgtccgccaccgtcccctgcctgcctgcgtacatcctc
ttcatgtgcatccgacacgccgactacatcaacgacgaccagaaggtggcggcgctgctc
acctccaccatcaacgccatcaagaaggtcctgaagaaaaacaacgacgactttgagatg
acgtcgttctggctggcgaacaccagccggctgctgcactgtctgaagcagtacagcggg
gacgaggtgttcatgacgcagaacacgagcaaacagaacgaacactgtctgaagaacttc
gacctggccgagtacagacaggtgctgagtgacctctccatccagatctaccagcagctc
atcaaggtggccgagagcatcatccagccaatgatagtgtcgtcgatgttggagagcgag
agcatccccagcctggcgggcgtgaagccgatgggctacaggaaccgctcgtccagcatg
gacacggatggcggcgggccgaacagctacacgctggaggctctgatccgccagctggga
cagtttcacgccatcatgagcgagcacggcctcgaccccgagatcgtgggtcaggtggtc
cgtcagctgttcaactgcatcaacgccgtcaccctcaacaacctgctgctcaggaaagat
gtctgctcctggagcaccggcatgcagctcaggtataacaccagtcagatggaggagtgg
ctccggggtaacaacctgtatcagagtaaaacagcagcgaccctggagccgatcatccag
gcggctcagctgctgcaagtcaagaagaaaacgtctcaggatgctgaagccatctgttcc
ctctgtaccagcctcaccacacagcagatcgttaagatcttgaatctttatactccgctc
aacgagttcgaggagagagtgacggtcgccttcatcaggaacatccagagtcgtctgcag
gagagaaacgatcctccgacgctgctgctggacaccaagcagacgtttcctgtcctgttc
ccctacacgccgtctgctctcagcctggacacgctgcacatccctgcttcactcagcctc
aacttcctcatcagagtctga
DBGET
integrated database retrieval system
