Scomber japonicus (chub mackerel): 128380779
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Entry
128380779 CDS
T09718
Name
(RefSeq) unconventional myosin-Vb-like
KO
K10357
myosin V
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
128380779
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sjo03019
]
128380779
04131 Membrane trafficking [BR:
sjo04131
]
128380779
03029 Mitochondrial biogenesis [BR:
sjo03029
]
128380779
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sjo04812
]
128380779
Messenger RNA biogenesis [BR:
sjo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
128380779
mRNA cycle factors
P-body specific factors
128380779
Membrane trafficking [BR:
sjo04131
]
Others
Actin-binding proteins
Myosins
128380779
Mitochondrial biogenesis [BR:
sjo03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
128380779
Cytoskeleton proteins [BR:
sjo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
128380779
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
AAA_16
Myosin_N
AAA_22
Ac76
nSTAND3
Motif
Other DBs
NCBI-GeneID:
128380779
NCBI-ProteinID:
XP_053196653
LinkDB
All DBs
Position
19:complement(31838086..31885694)
Genome browser
AA seq
1805 aa
AA seq
DB search
MSVNELFTKFTRVWIPDPEDVWRSAEISRDYKEGESVLHLKLEDETPLEYSVGQKSNPLP
FLRNPDILVGENDLTALSYLHEPAVLHNLRVRFLESNNIYTYCGIVLVAINPYEQLQIYG
EEVINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRFF
ATVGGSANDTNVEEKVLASSPIMEAIGNAKTTRNDNSSRFGKYIQIGFSRHYHIIGANMR
TYLLEKSRVVFQAEDERNYHIFYQLCASASLPEFKELSLTSAEDFTYTSLGENIFIDGVN
DAEDFQKTREAFTLLGIKESSQSSIFKIMASILHLGNIQICSERDGESCRISRDDIHLQA
FSRLLGVEQQQMEHWLCHRKLVTASETYVKNMSSHQAANARDALAKHIYAHMFDWIVEHI
NKSLHTSSKQHSFIGVLDIYGFETFESNSFEQFCINYANEKLQQQFNSHVFKLEQEEYMK
EQIPWTLIDFYDNQPCIDLIEARLGILDLLDEECKVPKGTDQNWAQKLYKQHSSSAHFQK
PRMSNTSFIINHFADKVEYQCEGFLEKNRDTVYEEQINILKASQFQLVADLFHDKDDVVS
SKSSRVNVRAAKSVPKTPNREHRKTVGLQFRSSLNLLMETLNATTPHYVRCIKPNDLKEA
FSFDSSRAVQQLRACGVLETIRISAAGYPSRWTYPDFFSRYRVLMKKSDVTASDKKLVCR
NLLETVVKEPDMFQFGKTKIFFRAGQVAYLEKLRADKFRAACIKIQKTVRGWLQRVRYTK
IRRSALILQRYGRGYLARRLAERLRRSRAALICQKQFRMVRDRRAFLRVRSAVVTIQAFT
RGMFTRRIYHEFLLHHRAMIIQKCVRGWLQRRKFRRARDAAVTLQCAYRRVLAKRRLQQL
KIEARSAEHLKKLNTGMENKIVQLYTQSKELRSQNDQLMVTNSSLGSEVTKLQEQLEHLR
SHQDEGQLTSLQEELQRLREELQEAHALRKKLQEEHSTEKLQLQERVEELQTENSLLKTE
KENMNQKILQQSKSIEDDSSVSQREVSLQSELDADRQRYQNLLKEFSRMEQRYDNLKEEL
SLTKFHPGHRRNPSNQSSLESDSNYPSISTSEVGDTEDSIQLVEEMGVEKAAMDISLFMK
LQKRVRELEQERKRLQANADQMEEAAKRKGSEVRSPSSEQETADLAYDNLKRQELESENK
KLKNDLNELRKTMADRVSQNGSSNELQDGYNVLLSQLRAANEELDARKEEVLILRTQIVS
VAQQQERSEHISNDTEPVDKDEALKAYHGLSESKKLLEAQLQSQSRQHKDELEALHTQIE
LLKADIEKKQEILNYTMSLSPEAQVEYSVQQEITRLTNDNLDLKELVEKLEKNERKLKKQ
LRIYMKKVQELEVSQAAVQASRSNPDLTRQVTVQRKEKDFEGMLEYNKEDEALLVKNLIA
DIRPNSVSATVPCLPAYILFMCIRHADYINDDQKVAALLTSTINAIKKVLKKNNDDFEMT
SFWLANTSRLLHCLKQYSGDEVFMTQNSSKQNEHCLKNFDLAEYRQVLSDLSIQIYQQLI
KVAESIIQPMIVSSMLESESIPSLAGVKPMGYRNRSSSMDTDGGGPNSYTLEALIRQLGQ
FHAIMSEHGLDPEIVGQVVRQLFNCINAVTLNNLLLRKDVCSWSTGMQLRYNTSQMEEWL
RGNNLYQSKTAATLEPIIQAAQLLQVKKKTSQDAEAICSLCTSLTTQQIVKILNLYTPLN
EFEERVTVAFIRNIQSRLQERNDPPTLLLDTKQTFPVLFPYTPSALSLDTLHIPASLSLH
FLIRV
NT seq
5418 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgaacgagctcttcactaagttcacccgggtgtggatccccgacccggaggat
gtctggaggtctgcagagatcagcagagactacaaggagggagagtctgtgctgcacctt
aaactggaggatgaaacgcctctggagtactcggtgggtcagaagtcgaaccctctgccg
ttcctgcgtaacccggacatcctggtgggagagaacgacctcaccgctctgagctacctg
cacgaaccggccgtcctgcacaacctcagggtccgcttcctggagtccaacaacatctac
acatactgcggcatcgtgctggtagccattaacccctatgagcagctgcagatctacggt
gaggaggtgatcaacgcctacagcggacagaacatgggagacatggatcctcatatattc
gctgtggctgaagaagcctacaagcagatggccagggacgagaggaatcagtctatcatc
gtgagcggagagtctggagcaggaaagacggtttctgctaagtacgcgatgcgtttcttt
gctacagtcggcggttcggccaacgacaccaacgtggaggagaaggtcctcgcctccagc
cccatcatggaggcgatcggaaacgctaaaacgactcggaacgacaacagcagtcgcttc
gggaagtacatccagatcggattcagccgccattatcacatcatcggagccaacatgcgc
acttacctgctggagaagtcccgcgtcgtcttccaggctgaagatgaaaggaattaccac
atcttctaccagctgtgtgcctccgcctccttaccagagttcaaggagctcagcctcacc
agcgctgaagacttcacctacacgtctctgggtgagaacatcttcatcgatggagtgaac
gatgctgaagactttcagaagaccagagaagcatttacactgctggggattaaagagagc
agtcagagcagcatatttaagatcatggcgtcgatccttcatctgggaaacattcagatc
tgctccgagagagacggagagtcctgtcgcatctcaagagatgacatccacctgcaggcg
ttcagccggctgctcggggtggagcagcagcagatggagcactggttgtgtcacaggaag
ttggtgacggcgtctgagacgtacgtgaagaacatgtcgagtcatcaggcggcgaacgct
cgcgacgcgctcgccaaacacatctacgctcacatgttcgactggatcgtggagcacatc
aacaaatccctgcacacctcctccaagcagcactccttcatcggggtcctggacatctac
gggtttgagacgttcgagagcaacagcttcgagcagttctgcatcaactacgccaacgag
aagcttcagcagcagtttaactctcatgtgtttaagttggagcaggaggagtacatgaag
gagcagattccctggacgctgatcgacttctatgataaccagccgtgcatcgacctgatc
gaggctcggctcggcatcctggacctgctggacgaagagtgcaaagtgccaaagggaacg
gatcagaactgggcccagaagctctacaagcagcactcgagcagcgctcacttccagaaa
cctcgaatgtccaacacgtccttcatcatcaatcactttgctgataaggtggagtatcag
tgtgaaggtttcctggagaagaacagagacactgtgtatgaggaacagatcaacatcctg
aaggccagccagtttcagctggtagcagatctgtttcatgacaaagacgacgtcgtttct
tcaaagtcgtcgagagtcaacgtccgagcagcgaagtctgttcccaaaactccaaacaga
gaacatcgcaagactgtcggactgcagtttcgcagctctctgaatcttctcatggagacg
ttgaacgctacaacgccgcactacgtccgctgcatcaaacccaacgacctgaaggaagcg
ttctcgtttgactccagccgggcggtgcagcagctcagagcctgtggagtcctggagacg
atccgcatcagtgctgctggatacccgtccaggtggacgtatccagacttcttcagcagg
tatcgggtcctgatgaagaaatctgacgtcacggcttcagataagaagctcgtctgtaga
aacctgctggagactgtggtgaaggaaccagacatgttccagttcggtaagacgaagatc
ttcttccgggccggtcaggttgcgtatctggagaaactgcgagctgataagtttcgagct
gcttgtataaagatccagaagacggtgagaggctggctgcagagagtccgctacaccaag
atacgcaggtctgccctcatcctgcagagatacggccgagggtacctggcacgcaggttg
gcggagcggctgcggcggagtcgagccgctctcatctgtcagaaacagttccgcatggtg
agagacagacgagccttcctgagggtgaggagcgccgtggttaccatccaggccttcacc
aggggcatgtttacccgccgcatctaccacgagttccttcttcaccaccgagccatgatc
atccagaagtgtgtgcgcggctggctgcagcgcaggaagttcaggcgtgcacgtgacgcc
gccgtgacgctgcagtgcgcctacagacgcgtgctcgctaagagacgactgcagcagctg
aagatagaagctcgctctgctgaacacctgaagaagctcaacacgggcatggagaacaag
atcgtccagctctacacacagagtaaagagctgaggagtcagaacgatcagctgatggtg
actaacagcagtctggggtcagaggtcaccaagctgcaggaacagctggaacatctgcgc
agtcaccaggacgaaggtcagctgacgtcgctgcaggaggagctgcagaggctgcgggag
gagctgcaggaggcgcatgctctcaggaagaagctgcaggaggagcacagcactgagaag
ctgcagctgcaggagagagtggaggagctgcagactgaaaactctctgctgaagacggag
aaggaaaacatgaaccagaagatcctgcagcagtcaaagagcattgaagatgacagcagt
gtgtctcagagagaagtgtctctacagtcagagttggatgctgaccggcagcgttatcag
aatctcctcaaagagttttccagaatggagcaaagatacgacaacctgaaggaggagctg
tctctcaccaagttccacccaggtcacaggaggaacccgtccaatcagagcagcctggag
tccgactccaactacccgtccatctccacgtcagaggtgggagacacggaagactccatc
cagctggtggaggagatgggagtagagaaagcagccatggacatcagtctgttcatgaag
ctgcagaagagagtcagagagctggagcaggagaggaagagactgcaggccaacgcagac
cagatggaggaggccgccaagcgcaagggctctgaggtgaggagtccttcctctgagcag
gagactgcagacctggcctacgacaacctgaagagacaggagctggagtcagagaacaag
aagctgaagaacgacctgaacgagctgaggaagacgatggcggaccgcgtgtcacagaac
ggctcgtccaatgagctacaggacggctacaacgtcctgttgagtcagctccgagcagcc
aatgaggagctcgacgcccggaaggaggaagtcctgattctgaggacgcagatcgtcagc
gttgcccagcaacaagagaggagcgaacatataagtaacgacacagaacccgtcgataaa
gacgaagctctcaaagcttatcatggactgtctgagtccaagaagctgctggaggcccag
ctgcagtctcagtcccggcagcacaaagatgagttggaggctcttcacactcagatcgag
ctgctgaaggccgacatcgagaagaagcaggagatcctgaactacaccatgtctctgtct
ccggaggcgcaggtggagtacagcgtccagcaggagatcacccgcctcaccaacgacaac
ctggacctcaaggagctggtggagaaactggagaagaacgagaggaagctgaagaagcag
ctccggatctacatgaagaaagtccaggagctggaagtgtctcaggcagcagttcaggcc
agcaggtctaaccctgatctgacccgtcaggtgaccgtccagcgtaaggagaaagacttt
gaggggatgttggagtacaacaaggaggacgaagctctgctggtcaagaatctcatcgca
gacatcagaccgaactctgtgtccgccaccgtcccctgcctgcctgcgtacatcctcttc
atgtgcatccgacacgccgactacatcaacgacgaccagaaggtggcggcgctgctcacc
tccaccatcaacgccatcaagaaggtcctgaagaaaaacaacgacgactttgagatgacg
tcgttctggctggcgaacaccagccggctgctgcactgtctgaagcagtacagcggggac
gaggtgttcatgacgcagaactcgagcaaacagaacgaacactgtctgaagaacttcgac
ctggccgagtacagacaggtgctgagtgacctctccatccagatctaccagcagctcatc
aaggtggccgagagcatcatccagccaatgatagtgtcgtcgatgttggagagcgagagc
atccccagcctggcgggcgtgaagccgatgggctacaggaaccgctcgtccagcatggac
acggatggcggcgggccgaacagctacacgctggaggctctgatccgccagctgggacag
tttcacgccatcatgagcgagcacggcctcgaccccgagatcgtgggtcaggtggtccgt
cagctgttcaactgcatcaacgccgtcaccctcaacaacctgctgctcaggaaagatgtc
tgctcctggagcaccggcatgcagctcaggtataacaccagtcagatggaggagtggctc
cggggtaataacctgtatcagagtaaaacagcagcgactctggagccgatcatccaggcg
gctcagctgctgcaagtcaagaagaaaacgtctcaggatgccgaagccatctgttccctc
tgtaccagcctcaccacacagcagatcgttaagatcttgaatctttatactccgctcaac
gagttcgaggagagagtgacggtcgccttcatcaggaacatccagagtcgtctgcaggag
agaaacgatcctccgacgctgctgctggacaccaagcagacgtttcctgtcctgttcccc
tacacgccgtctgctctcagcctggacacgctgcacatccctgcttcactcagcctccac
ttcctcatcagagtctga
DBGET
integrated database retrieval system
