Scomber japonicus (chub mackerel): 128380855
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Entry
128380855 CDS
T09718
Symbol
atrnl1b
Name
(RefSeq) attractin-like protein 1
KO
K24332
attractin
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
sjo04091
]
128380855 (atrnl1b)
Lectins [BR:
sjo04091
]
C-Type lectins
Others
128380855 (atrnl1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ATRN-LZTR1
Kelch_KLHDC2_KLHL20_DRC7
GBD_ATRN
Kelch_5
Kelch_1
Kelch_4
Kelch_3
Kelch_6
EGF_LMN_ATRN
Lectin_C
Kelch_2
CUB
PSI
EGF_TEN
NANM
EGF_Teneurin
RecR_ZnF
EGF_2
TMEM100
EGF_laminin
Motif
Other DBs
NCBI-GeneID:
128380855
NCBI-ProteinID:
XP_053196695
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All DBs
Position
20:14092829..14164287
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AA seq
1378 aa
AA seq
DB search
MDPGGRCTTKLFLFGPKVATHSDVRGINRYLVVCVLFYLVLFTHASPAKPCDKNCLSGKC
INGSCICDRGWVGDQCQHCQGRFKLTEPSGYLTDGPINYKYKTKCTWLIEGYPNAVLRLR
FNHFATECSWDHMYIYDGDSVYAPLVAVFSGLIVPEVRGNETVPEVETTSGYALLHFFSD
AAYNLTGFEIFYSINSCPNNCSGHGKCTPGNSAASRVYCECDKYWKGEACDIPYCRNNCG
SPDHGYCDLTGEKLCVCNDSWQGPDCSLTVPSTESFWVLPSVKAFGTSLARASHKAVVQE
KVMWVVGGYTFNFSSFQMILNYNLESGIWNTVPINSGPVPRYGHSLAAYQDDIYMFGGKL
EAGWGNVTDELWVFSIPSRTWQRRNPVVGPPAQAQIYAVEGHSAHCVVLDDDEPIMLVIF
GYSPIYSYVSNVQEYNLRSNTWSVPETKGAVPQAGYGHSSTFDSASSSVYVHGGYKALPA
NKYGLVDDLYRYDVNTRTWYILRESGYPRYMHSAVLLSGTLLIFGGNTHNDTSLSNGAKC
FSADFLAYDIACDEWRLLPKPDLHRDINRFGHTAVVSNGSMYVFGGFSGVLLNDVLVYRP
PSCQAFLAEEGCMKAGPGVRCMWSRGRCLPWEPSMANGSLSPAPFCPPKAVTIDERCYRF
SDCATCTANTNGCQWCDDKKCISAASNCTSNVKNFTECPVRNEQVCSKLANCKSCSLNLN
CQWDQNQSECHALPAQQCSEGWSQVGEACLRINSSRESYDNAQHYCKNLNGNIASLTTSK
QVDFVLEELKKLQQQDKRLSPWVGLRKINVSYWGWEDMSPFTNGSLRWLPGEPSDSGFCA
YLEEPQVSGLRANPCTATAHGLICEKATGNPNQSARPSCKKPCSLHTNCANCTSQAMECM
WCSSAQRCVDSTAYVISFPYGQCLEWQTGDCVAQNCSGLRTCSKCLEQPECGWCGDPSST
GKGLCMEGSSRGPMKRPAKQGQQSQSQDMILEPGSCPKDKGYEWAFIQCPACQCNGHSTC
VNGSVCEQCRNLTTGPHCQICMPGYHGDPTNGGKCQACKCNGHASVCQVLTGKCFCTTKG
IKGDQCQLCDSENRYLGNPLRGTCYYNLLIDYQFTFSLIQEDDNHYTAINFMASPEQANK
NLDMSINASNNFNLNITWSVGSTAGTISGEEVPIVSKTNIKEYRDSFSCEKFSFRSNPNI
TFYVYVSNFSWPIKIQIAFSQHNSIMDLVQFFVTFFSCFLSLLLVAAVVWKIKQTCWASR
RREQLMRERQQMASRPFASVAVALDARGEQTEMLQPVVDGPPKPVAMEPCSGGKAAVLTV
LMCLPSGPSGLPPPGQSGLIVASALIDISQQKPSDFKEKSQASKNRKALPPAHQGTCV
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atggatcctggggggagatgtacgactaaactctttctctttggacctaaagtagccacc
cacagcgatgtgcggggcatcaacagatacttggtggtctgtgttttgttttacttggtc
ctcttcactcacgcctctccggcgaaaccgtgcgacaagaattgtctctccggaaaatgt
ataaacggatcctgcatctgtgatcgaggatgggttggagaccagtgtcagcactgccag
gggagattcaagttgacggagccctcaggatacctcaccgatggtccaatcaactataag
tacaaaacaaagtgtacctggctcattgagggctatccaaatgcagttcttcggttaagg
tttaaccactttgccacagaatgtagttgggaccatatgtacatctatgatggagactca
gtatatgctcctctggttgctgttttcagcggtctgattgtaccagaagttcggggaaat
gagacagtccctgaggttgagacgacttcaggctacgcactactacactttttcagcgat
gctgcctataacctcacaggatttgaaatattttactcgatcaactcttgtcccaataac
tgctctggtcatgggaagtgcacccctgggaactcagctgctagcagagtgtactgcgaa
tgtgacaagtattggaagggtgaggcgtgcgacatcccctactgcaggaacaactgcggc
agccccgaccacggatactgcgacctcaccggggagaagttgtgtgtctgcaatgacagt
tggcaaggcccagactgctccctgactgtaccttcaacagagtccttctgggtcttaccc
agtgtcaaggcctttggcacatcactcgccagggcttcccataaggccgtggtgcaggag
aaggtcatgtgggtggtgggcggatacaccttcaacttcagctccttccagatgattctc
aactacaacctggagagtggcatctggaacacagtgcccatcaacagtggccccgtgcca
agatacggccactcgctcgctgcctaccaggacgatatctacatgttcggtgggaagctg
gaggccggttgggggaacgtgacggatgagctgtgggtgttcagcataccaagccggacg
tggcaacgcagaaaccctgtggtcggcccgcctgcccaggctcagatttacgcagtggag
ggtcactcagcccactgcgttgtgctggatgatgacgaacccataatgctggtcattttt
ggctactcccccatctacagctacgtcagcaatgttcaagagtacaacctgaggtccaac
acttggtcggtgcctgagaccaaaggtgccgttccccaggcaggctacggccacagcagc
acgtttgacagcgccagcagcagcgtgtatgttcacggaggctataaggcactgcctgcc
aataaatacggccttgttgatgacctttaccgctatgacgttaacacgcggacatggtac
attctgagagagagcggctatccacgctacatgcactcagccgtgctcctcagcggcacc
ctgctcatctttggtggcaacacgcataacgacacatcactcagcaatggggccaagtgt
ttctctgctgacttccttgcctatgacattgcctgtgatgagtggagactcctgcctaaa
cctgacctgcacagggatatcaaccgctttggacacactgctgtggtcagcaatgggtcc
atgtatgtgtttgggggcttctctggtgtgttgctcaatgacgtgcttgtatatcgaccc
cccagctgccaggccttcttggcagaggaggggtgtatgaaggctggaccaggggtccgc
tgcatgtggagcagaggccgctgtctcccttgggaacctagcatggctaatggaagcctc
agtcctgccccattctgcccccctaaagctgtcacaattgatgagcggtgctaccggttt
tcagactgtgccacctgtacagccaacactaatgggtgccagtggtgtgacgacaagaag
tgcatctctgccgcaagcaactgtacctctaacgtgaagaacttcactgagtgtccagtc
cggaacgagcaggtgtgtagcaagcttgccaactgcaagagctgctcgctgaatctcaac
tgtcagtgggaccaaaatcagtcagagtgccatgctttgcctgcccagcagtgcagtgag
ggttggagccaggtgggagaggcctgcttgaggatcaactccagtagggagagttacgac
aacgcccaacactactgcaagaacctcaatggaaacatcgcttctctcaccacctccaaa
caagtggactttgtgctagaggagcttaagaagctacagcaacaagacaagcggctgtcc
ccctgggtgggcctgaggaaaatcaacgtgtcgtactggggttgggaggatatgtctccc
ttcaccaacggcagcctgcgttggctgcctggcgagcccagtgactctggtttctgtgcc
tacctggaggagcctcaggtgtctggtctcagggccaatccatgcactgccactgcccac
ggcctcatctgcgaaaaagctaccgggaatcccaatcagagtgcccgtccatcctgtaag
aagccttgctccctacacaccaactgtgccaactgcaccagccaggccatggagtgtatg
tggtgcagcagtgcacagcgctgtgtcgactccactgcctatgtcatctcttttccctat
ggccagtgtctggagtggcagactggagattgtgtggctcagaactgttcaggcctgcgg
acatgttccaagtgtttggagcagcctgagtgcggttggtgtggggaccccagcagcaca
ggaaagggtctgtgtatggaaggctcatcccgggggcccatgaagagaccggcaaagcag
ggccagcagagccagtcccaggacatgatcctggagccaggcagctgccccaaagacaag
ggctatgagtgggccttcattcagtgccccgcatgccagtgtaatggccacagcacgtgc
gtgaacggcagtgtgtgtgaacagtgtcgcaacctcaccactggtcctcactgccagatc
tgcatgcctggttaccatggagacccaaccaatggcggcaaatgccaggcttgtaagtgt
aatggccatgcaagtgtatgccaggtgttaactggaaagtgcttctgtaccaccaaaggg
atcaaaggagaccagtgccagctatgtgactcagaaaaccgttaccttggcaatccactc
aggggaacctgttactacaatctgttgatcgactaccagttcaccttcagtctcatccaa
gaagatgataatcactacactgccatcaactttatggcctcacctgaacaggccaacaag
aacttggacatgtctattaatgcatccaacaactttaacctcaatatcacctggtcggtg
ggctcaacagctggaaccatttctggagaggaagtgcccattgtgtccaaaactaacatc
aaggaatacagagacagcttctcctgtgagaagttcagctttagaagcaaccccaatatc
accttctatgtctacgttagtaacttctcatggcccatcaagatccagattgccttctcc
caacacaacagtatcatggaccttgtccagttcttcgtgacatttttcagttgctttctg
tcgctactcctggtggcagcagtggtgtggaagatcaaacagacctgttgggcttcacgg
cggagagaacaactaatgagagagcgtcagcagatggccagtcgtccattcgcttcagtt
gctgttgctctggacgccaggggagaacaaacagaaatgctgcagcctgtggtagatggt
ccacctaaacccgttgcgatggagccatgttcaggaggaaaagctgctgtgctgactgtc
ctcatgtgtctgccatctggtccctcgggcttgcctccaccaggccagtcaggactcatt
gttgccagtgcgctgatagacatttcacagcagaaaccatctgactttaaggagaaatcg
caggcttcaaagaaccgaaaagctcttcctccagcacaccaaggcacctgtgtctga
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