Scomber japonicus (chub mackerel): 128380897
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Entry
128380897 CDS
T09718
Symbol
vps35l
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like isoform X1
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128380897 (vps35l)
Membrane trafficking [BR:
sjo04131
]
Protein recycling
Others
Retriever complex
128380897 (vps35l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
128380897
NCBI-ProteinID:
XP_053196749
LinkDB
All DBs
Position
20:complement(20267449..20277376)
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AA seq
970 aa
AA seq
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MAAVQWRSRGRNYEAELQRCRPEAAPVEFGDYHPLKPIMVTDTKTRRGARKGSTSSSSSS
SSSAAPDPLSSMLDGTDPLSMFAAASATETPALSHSASTGDLGRKRREKEAEEAVGPDFE
PWSVKRGEILARFTTTEKLSINLFMGSDKGKAPSPGSSAVSEKVRTRLEELDDLEEGSQR
ELLNLSQQDYANRIEELNQSLKEAWASDQKVKALKIVIQCSKLLSDTSVIQFYPSKFVLI
TDILDTFGRLVYDRIWTMCSDPRPLSDSFTVDDVNDTAKETCLNWFFKIASIRELLPRLY
VEAAILKCNRFLTKSGIQETLPRLTAMIRGIGDPLVAAYTRAYLCRVGMEVAPNLKDSLN
RNFFDLLGTFRQISSESVQNQLVQQRVEVPEYLTLYSPAINWILQCIAYRAPEPLLTEMM
ERCKKLGNNALLLNSVMRAFRPDFAATRATDFIGMIKDCDEAGFPKHLLFGSLGRSLACA
DPPESERLTILNEAWKVITKVRSPRDYINCAEIWVEFTCRHFTKREVNTVMADIIKHMTP
DRAFEDAYPQLQSVIRKILTYFNDFSVLFSMERFLPFLDMFQKDSVRVEVCRSIMEVFIK
HQLEPTRDPVILNAMLHICKTMHDSVNALTLEDEKRSLSLLIIGFIRMVCFGRDFEQQLS
FCVEARATFCNLEQVLVQLIHTVNQLAMETRRVMRGNHSRKTAAFVRACAAYSFITIPSL
SSIFSRLSLYLQSGQVALANQCLSQADAFLKAAVSILPDVPRSISIEGKLRSSESFLMDF
INNFLATLLVIPDHPEHGVLYLVRGLLNMVQDYTWEDNSDAKVRVYVSALPLLAAMSQET
YLYSIPKVDSNETLYGGDPKFLSEINKLCETLIGQVLDHLKVLGRDEQQSTRRQGALAFS
LFGVLLAHGDLRNNKLSQLAVNLWNLSHKHGYCDTRVSVRTLESIKQQAVQHDMSHLSDT
VQRLTLQSRT
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggtgcagtggcgttcccgcggacgcaactatgaagcggagctgcaaaggtgt
cgtcctgaggcggctcctgttgagtttggagactaccatcctctcaaaccaatcatggtg
acagacaccaagacccgccgcggggctcgtaaaggcagcacctcctcttcttcctcctcc
tcttcctccgcggccccggaccccctcagctccatgttggacggtactgaccccctgtcc
atgtttgccgcggcctctgccaccgagactccagccttgtcacacagcgcctccactggg
gacttggggaggaagaggagggagaaagaggcagaggaggcggtgggaccagactttgag
ccctggtcagtgaagagaggagagatcctggccaggtttacaaccaccgaaaaactctca
attaatctctttatgggctctgataaaggaaaagctcccagtcctggatcctcagcggtg
tcagagaaggtccgcactcgcctggaggagctggatgatctggaggagggttcccagaga
gagctgctgaacctctcccagcaggattatgccaaccgcatcgaggagctaaaccagtcc
ctgaaggaagcctgggcctctgatcagaaagtcaaagccctgaagatcgtcatccagtgc
tccaagcttctgtctgacacctctgtgatccagttctaccccagcaagtttgttctcatc
actgatatcctcgacacttttggccggctcgtgtacgacagaatctggaccatgtgttct
gacccacgacctttgtctgattccttcacagttgatgatgtgaatgacacagccaaggag
acgtgcctcaactggttcttcaagatcgcctccatcagagagctcctgcccagactatat
gtggaggctgccatcctcaagtgcaaccgcttcctgaccaaatccggcattcaggagact
cttcctcggttgacggctatgatcagaggtattggagaccctttggtggctgcgtatacc
agagcttacctctgcagggtgggcatggaagtcgcccctaacctgaaagacagcctgaac
cgcaacttcttcgacctgctcggcacattccgtcagatcagcagcgagagcgtccagaac
cagctggtccagcagagggtggaggtgccagagtacctgacgctttactcacccgccatc
aactggatcctgcagtgtatcgcctacagagctccggagcctctcctaacagagatgatg
gagagatgcaagaagctggggaacaatgccttgctgctgaattcagtaatgagggccttc
agacctgactttgcagcgaccagagcgacagacttcatcggtatgattaaagactgcgac
gaggccggcttcccaaagcatctgttgtttggatctctgggtcgcagcctggcgtgtgcc
gaccctccagaatccgagaggctgaccatcctcaatgaagcctggaaggtcatcaccaaa
gtccgcagtcctcgggattacatcaactgcgcagagatctgggtggagttcacctgccga
cactttacaaaacgtgaggtcaacaccgttatggctgacatcatcaaacacatgacccct
gaccgggcgttcgaggacgcctaccctcagctgcagtcagtgatcaggaagatcctcacc
tacttcaacgacttctccgtcctcttctccatggagcgtttcctgccttttctagacatg
ttccagaaggacagtgttcgagtggaggtctgcagatccatcatggaggtcttcatcaaa
caccagctggagcccaccagagaccccgtcatcctcaacgccatgctgcatatctgcaag
accatgcacgactcagtcaacgctctcactctggaagacgaaaaaagatctttgtctctg
ctgatcattggcttcatccgcatggtttgttttggtcgtgacttcgagcagcagctgagc
ttctgtgtggaggccagagccacgttctgtaacctggagcaagtgctggtgcagcttatc
cacacggtgaaccagctggcgatggagaccaggagggtgatgagagggaatcactccaga
aaaacggcagcatttgtcagagcgtgcgctgcctacagtttcatcaccatcccgtctcta
agcagcatcttcagtcgtctcagcctctatctgcagtctggccaggttgcattggctaac
cagtgtctctcccaggcggacgccttcctaaaagcagcggtcagtattcttccagatgtt
cctcgctccatcagcattgaggggaaacttcgctcctctgagagtttcctgatggacttc
atcaacaacttcctggctaccctgctggttatcccggaccacccagagcatggtgtgctc
tatctagtccgcggtctgctcaatatggtccaggattacacctgggaggacaacagcgac
gccaaggtgcgggtctacgtcagcgcactgcccctgctggccgctatgagtcaagaaacc
tacctctactccatccccaaagtggattcaaatgagacactttacggaggagaccccaag
tttctatcagagatcaacaagctgtgtgagaccctgattggacaggtcctggaccacctg
aaggttctcggtcgggacgagcagcagagcacacggcgtcagggcgctttggccttctcc
ctgttcggcgtcctgctggctcacggtgacctgaggaacaacaagctgagccagctggcc
gtcaacctgtggaacctcagccacaaacatggatactgcgacacacgcgtctctgttcgg
actctggagtccatcaaacagcaggctgtgcagcacgacatgtctcacctgtcagacacg
gtccagagactcacactgcagtcccgcacctga
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