Scomber japonicus (chub mackerel): 128380920
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Entry
128380920 CDS
T09718
Symbol
dhx32a
Name
(RefSeq) DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 32a
KO
K18994
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [EC:
5.6.2.6
]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sjo03041
]
128380920 (dhx32a)
Enzymes [BR:
sjo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
128380920 (dhx32a)
Spliceosome [BR:
sjo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
128380920 (dhx32a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Motif
Other DBs
NCBI-GeneID:
128380920
NCBI-ProteinID:
XP_053196782
LinkDB
All DBs
Position
20:11149740..11155883
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AA seq
739 aa
AA seq
DB search
MSQENNSAEPDIYPENEECPGEDPLGFGDELELNQFDGLPFSSRYYKLLKERKTLPVWKV
RCEFEDSLVNNQLVVVSGTAKTGRSTQIPQWCAEFCLSAQYQHGMVVCTQTNRQQAVDLA
LRVADEMDVNIGHEVGYTITLETCCSSDTVLRYCTDDMLLREMMSDPFLEHYGVIIIDQA
HERTVSTDILLGLLKDILLQRPDLRVVVLAVPPMTDKLLSHYVGVPLISLEDSCSAEVVH
SNSGNKDYFYSALRLVLEIHRTKEDGDIVVFFASAGEVHCAHSILQRERTRLGVELGQMV
PVVLCPSQRGLLPSLTEQPDSRGSRKVFLSTQQGEDMWWAAESVNFVIDTGVQKKMVYNP
RIRANSEVLQTISQFQADVRKRLSGPTGKCFCLYPEDSQLPAERSPQILESNITSTVLFL
KRMEIGGLGQCDFIDRPDPEGLMQALEELDYLAALDDDGNLSEIGIIMSEIPLDPQMAKS
LLASCEFDCVSEMLTIAAMLSAPSCFLEPPAGMTHEAVQCHRKFQHPEGDHFTLINIYNA
FKQSQREQYFSAEKWCQDYYLDHSALKTAEAIRSELTDTLNRIELPISEPSFGTKTNTHN
IKRTLLAGFFMQIARDVDGSGNYFILTHKHMAQVHPLSSYGAQSHKLGLPEWVIFHEYTL
SENNCMRTVSEISPQVFIQMAPLYFFYNLPPSESKNILQDMLDPDGSRNCKEQRAAPDSS
DTDDGCAAVPQTYDRCVIQ
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaggagaataattcagcggagccagacatttaccctgaaaatgaagaatgtccc
ggggaagatccacttggctttggagatgagctggaattaaatcagttcgatggattgccc
ttttcctcgcgttactataaattactaaaagagaggaagactctgccagtgtggaaggtc
aggtgcgaatttgaagattccctggttaacaaccaactggttgttgtgtctgggacagca
aagactggaaggagcacacagatccctcaatggtgtgcagagttctgcctatctgcccag
taccagcatggcatggttgtgtgcacacagactaacaggcagcaggctgtagatctggct
ttgcgtgtggctgatgaaatggacgtcaacataggccatgaagtgggttacaccatcact
ctggagacgtgctgctcctctgacactgttctgaggtactgcactgacgacatgctgctg
agagagatgatgtcggacccttttctggaacactacggggtcattattatcgaccaggcc
cacgagaggacagttagtactgatatactgctgggtctcctgaaggacatcctgctgcag
aggcctgacctcagagtggtagtcctcgctgttccacccatgactgacaagctgctgagc
cactatgttggggtcccgctcatcagtctggaggactcttgttctgctgaagtggtccac
agcaacagtggtaacaaggactacttctactcagcgctgagactggtgctggagatccat
cgtaccaaagaggatggagatatcgttgtgttctttgcctcagctggggaggttcattgt
gcccatagcatcctccagagagagcgtaccaggctaggagtggagcttggccagatggtg
cctgtggtcctatgcccaagccagagagggctgttgcctagcttgactgaacaacctgac
tccagggggtcaagaaaggttttcctctctacccaacagggggaggatatgtggtgggcg
gcagagtctgttaactttgtcatcgacacaggagtccagaaaaaaatggtgtacaatcca
agaataagagctaactcagaggtgcttcaaaccattagtcagttccaggcagatgtacgc
aagcggctctctggaccaacaggtaaatgtttttgcctatatccagaggacagccagctt
cctgcagagagatccccacagatcttggagtctaacattacatcaacagtccttttccta
aaaaggatggagataggcggcctcggacagtgtgattttattgacagaccagatccagag
ggtctcatgcaggccttggaggagctggattacctcgcagctttagatgacgatggcaat
ttgtctgagattgggatcataatgtctgaaatccctctggaccctcagatggccaaatct
ctgctagcatcctgcgagttcgactgtgtgagtgagatgttgacgattgcagcgatgcta
tcagcgccaagctgcttcctggagccacctgctggcatgacacatgaggcagtccagtgt
cacagaaagttccagcaccccgagggcgatcacttcaccctcattaacatctacaatgcc
ttcaaacagagtcagagagaacaatacttcagtgctgaaaagtggtgccaggactactac
ctagatcattctgccctgaagacagctgaggccattagatcagagttgactgacaccctg
aataggattgaacttcccatctctgaaccgtcctttggaaccaagaccaatacccacaac
atcaaaagaactctcctggctgggttcttcatgcagattgctcgagatgtggatggatca
ggaaattacttcattctgacacacaagcacatggcccaggtgcacccgctctccagctat
ggggcccagtcccacaaactgggactgccagagtgggttattttccatgagtacacgctg
tcagagaacaactgcatgagaacagtctcagaaatttcccctcaagtgttcattcaaatg
gcaccactgtacttcttctacaatctgccccctagtgaaagcaaaaacatactgcaagac
atgctggatccagatggatcaagaaattgtaaagaacaaagagctgcacctgacagcagt
gacactgacgatggctgtgcagcggtgccgcagacttatgacagatgtgtaattcaatga
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