Scomber japonicus (chub mackerel): 128380947
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Entry
128380947 CDS
T09718
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1-like
KO
K17908
autophagy-related protein 18
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04136
Autophagy - other
sjo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128380947
04136 Autophagy - other
128380947
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128380947
03029 Mitochondrial biogenesis [BR:
sjo03029
]
128380947
Membrane trafficking [BR:
sjo04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
128380947
Mitochondrial biogenesis [BR:
sjo03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
128380947
BRITE hierarchy
Motif
Pfam:
PROPPIN
WD40
ANAPC4_WD40
CPSF_A
BCAS3_WD40
RMC1_N
Motif
Other DBs
NCBI-GeneID:
128380947
NCBI-ProteinID:
XP_053196818
LinkDB
All DBs
Position
20:18302818..18309874
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AA seq
443 aa
AA seq
DB search
MESQEVPDGPEVHRGFICASFNQDTTSLSVGTKTGYQLFSVTAAEKLDCIHEGVECPDVY
IVERLFSSSLVVVVSLSMPRRMNVYHFKKGTEICNYSYSNNILSVRLNRQRLVVCLEESI
YIHNIKDMKLLKTLLNTPTNPSGLCALSVNHSNSYLAYPGSATIGEITVYDANSLSTVTL
IQAHDSPLAALTFNASGTKLASASEKGTVIRVFSIPEGQRLFEFRRGMKRYVSISSLSFS
ADAQFLCASSNTETVHIFKLEQHSPSQEEESPTWSAYVGKMFTAASTYLPAQVSDMMHQD
RAFATVRLNMFGLKNICALATIQKLPRLLVASSDGYLYIYNVDPQDGGECVLVQKHRLFE
TSEEQVEQKEEEKLEDDSPQPASQSYAATVALPSTPPSSTTLMGYSEDGGAQKGEVIPEH
EFAESPVCLDDENEFPPVSNQSN
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggagtcccaggaagtgccggacggccccgaagtgcacagaggcttcatctgtgcctcg
tttaaccaggacaccacttctctgtcggtgggtaccaagactggctaccaactcttctca
gtcactgctgcggaaaaactggactgcatccatgagggagtggagtgtccagatgtgtat
atagtggagcggctgttctccagcagtctggtggtggtggtcagtctgtccatgccacgg
cgaatgaacgtctatcactttaagaagggcacagagatttgtaactacagctactccaac
aacatcctctccgtcaggctcaacagacagcgactggtggtgtgcctggaggagtcgatt
tacatccacaatatcaaagacatgaaactacttaagactctgctcaacacacccaccaac
ccctcaggtctctgcgccctctctgtcaaccacagtaactcctacctggcataccccggc
agcgccaccatcggagagatcacggtctatgatgccaacagtctgagcactgtgacgctg
atccaagcccatgacagtcctctggcagccctcaccttcaatgcctctggcaccaaactg
gccagcgcttcagagaagggtactgttatcagagtcttcagcattcccgaagggcagagg
ctgtttgaattccgcagagggatgaagagatatgttagcatcagttcattgtccttcagt
gcggatgcccagttcctgtgtgcctccagcaatactgagacagtccatatctttaaactg
gagcagcacagtccaagtcaagaggaggagtctcctacatggtcagcgtatgtgggaaaa
atgttcacagcggccagcacctacttgcccgcccaggtgtctgacatgatgcatcaggac
agagccttcgccactgttcgactcaacatgttcggcttaaagaacatctgcgccctggct
accattcagaagcttcctcgcctgctggtggcatcctcagacgggtatctttacatctat
aatgtggacccacaggatggaggcgagtgtgtcttggtccaaaaacacaggctgtttgaa
accagcgaggagcaggtggaacagaaggaagaggagaaactagaggatgactcgccccaa
ccagccagccaatcatatgctgccactgtggctctcccctcaactccaccctcttccacc
actctcatgggatactctgaggacggaggagcccagaagggtgaggtcatcccagaacat
gaatttgcagagagccccgtctgtctggatgatgaaaatgagtttcctcctgtcagcaac
cagagtaactga
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integrated database retrieval system
