Scomber japonicus (chub mackerel): 128380964
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Entry
128380964 CDS
T09718
Name
(RefSeq) carnitine O-palmitoyltransferase 1, liver isoform-like
KO
K08765
carnitine O-palmitoyltransferase 1, liver isoform [EC:
2.3.1.21
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo00071
Fatty acid degradation
sjo01212
Fatty acid metabolism
sjo03320
PPAR signaling pathway
sjo04148
Efferocytosis
sjo04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
128380964
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
128380964
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
128380964
03320 PPAR signaling pathway
128380964
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
sjo03029
]
128380964
Enzymes [BR:
sjo01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.21 carnitine O-palmitoyltransferase
128380964
Mitochondrial biogenesis [BR:
sjo03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
128380964
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Carn_acyltransf
CPT_N
DUF3852
SpmSyn_N
Motif
Other DBs
NCBI-GeneID:
128380964
NCBI-ProteinID:
XP_053196840
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Position
20:16175116..16190478
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AA seq
785 aa
AA seq
DB search
MAEAHQAVAFQFTVTPEGIDLQLSHQALTEIYLSGVRSWKKRIIRLKNSVVTGVYPASPS
SWLFVVIAILATMYTRSDPSMGLIAKIQEHLPVSQSMSSQCQTVVSAVLFSTMLWLLLIF
TMRLCLKQLLSYHRWMFENHGKMSNTTKVWVALVRIFSGRKPLLYSYQGSLPNLPVPVVK
DTVKRYLESVRPLMDDAEYERMTKLAADFESSLGNRLQWYLKLKSLWSSNYVSDWWEEYI
YLRGRSPIMVNSNYYGMDFLYVTPTPIQAARAGNTIYAFFLYRRKLNKEELKPSRIPGTV
IPLCSAQCERMFNTTRTPGEETDTVQHWQDSDYVAVYHQGRYFRLRVYQAGRLLSPREIE
FQVQRILDDSSPPSKGEAKLGALTAGERVPWAKARMNHFSSGVNKRSLDCIEKAAFFVTL
DDDEEGMLGENPEASLDHYAKSLLHGKCYDRWFDKSFSVVYYKNGKTGINAEHSWADAPV
VAHLWEFALATDSFQLGYNAEGHCKGEVDSSLPRPQKLTWEIPPECEEQISQSLAVAQAL
ADDVDCHVFSFREFGKGRIKKCRVSPDAFLQIALQLAYYRERRTFCLTYEASMTRLFREG
RTETVRSCSNESSAFVRALEGEEATDVCRRLFRAASEKHQNLCRMAMTGAGIDRHLFCLY
VVSKYLGVESPFLKEVLSEPWRLSTSQTPLQQVELFDLVNHPEYISCGGGFGPVADDGYG
VSYYIYGENLINFHISSKHSCPDTDSHKFGAQIRKALQDLIQLIGPNQRESSRTEKSQHE
FKKDK
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcccaccaggcggtggccttccagttcaccgtcaccccggagggcatcgat
ctgcagctgtcccaccaggccctcactgagatctacctctctggtgtgcgctcttggaag
aaacgtatcatcagactcaagaacagtgtggtaacaggcgtctatcccgccagcccgtcc
tcttggctttttgtggtcatagcaatcctggctaccatgtacactcggtccgacccctcc
atgggactcatagccaagatacaggagcacctccctgtcagccagtccatgagtagccag
tgccagacggtggtgtcggccgtgctcttcagcaccatgctgtggctcttgctcatcttc
accatgcgcctgtgcctcaagcagctcctctcctaccaccgctggatgttcgagaaccat
gggaagatgtccaacaccaccaaagtctgggtggcgctggtgcggatcttctctggcaga
aagcctcttctctacagctaccagggttcattgccaaacctgcctgtgcctgtcgtaaag
gacacagtgaagaggtacttggagtcggtgcgtccgctgatggatgacgcagagtacgaa
cgcatgaccaagctggctgcagactttgagagcagcctcggtaaccggctgcagtggtac
ctcaaactcaaatctctctggtcttccaactatgttagtgactggtgggaggaatatatt
tacctacgaggacgaagcccaataatggtcaacagtaactactacggcatggacttcttg
tatgtgacacccactcccatccaggcggccagagcaggcaacaccatatatgcattcttt
ctctaccgccgcaaactcaacaaagaggagcttaaacctagtcgcattccaggcactgtc
attcctctgtgctcagctcagtgtgagaggatgttcaacaccacacgcactcctggagag
gagaccgacacggtgcagcactggcaggacagtgactacgtcgcggtgtaccaccaagga
cgctacttccggcttcgggtgtaccaggcaggcagactcctgtccccaagggagattgaa
ttccaagttcagaggatcctcgatgactcttcacctccttccaaaggagaggcaaaactc
ggtgccctgaccgccggtgaaagagtgccgtgggctaaagccaggatgaaccacttcagc
agcggggtcaacaaacgctctctggactgcattgagaaagctgctttcttcgtgactcta
gatgatgacgaggagggcatgttgggagagaacccagaagctagtttggatcactatgcg
aagtccttgttgcatgggaagtgttatgacaggtggtttgacaaatccttctcagttgtt
tactacaagaatggaaagactggtattaatgcagagcactcatgggccgatgcaccagtg
gtggcacacttatgggagttcgccctggccactgacagcttccagctcgggtacaatgca
gagggtcactgcaaaggagaagtagattcatcattaccacgaccacagaagctgacctgg
gaaatccctccagaatgtgaggagcaaatatctcagtctctggcagtggcccaggccctg
gctgacgatgtcgactgccacgtcttctccttccgagagtttggcaaggggaggatcaag
aagtgtcgagtcagtccagatgccttccttcagatcgctcttcagttggcttactacagg
gagcgtaggacattctgcttaacgtacgaagcctccatgactcgcctgttcagggagggc
aggactgagaccgttcgctcctgcagcaatgagagcagtgcctttgtccgagcgctggag
ggtgaagaggcaacagatgtgtgcaggcgtttgttccgcgcagcatcagagaagcaccag
aatctgtgtcgtatggcaatgaccggagctggcatcgacagacacctcttttgcctctat
gtggtgtccaaatacctcggagtggagtctcctttcttgaaagaggtgctgtctgagccc
tggaggctgtccaccagtcagactccactccagcaggtggagctgtttgacctggttaac
cacccagagtacatctcctgtggagggggctttggtccggtggctgatgacggttatggg
gtgtcttactacatctatggagagaacctgattaatttccacatctccagcaaacattca
tgtccagacactgactcccacaagttcggtgctcagatcagaaaagccctgcaagacctg
atacagctgattggccccaatcaaagagagtccagcagaacagaaaagagtcagcacgag
ttcaaaaaagacaagtag
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