Scomber japonicus (chub mackerel): 128381043
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Entry
128381043 CDS
T09718
Symbol
nlrc3
Name
(RefSeq) NLR family CARD domain-containing protein 3
KO
K22614
NLR family CARD domain-containing protein 3
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
sjo04054
]
128381043 (nlrc3)
Pattern recognition receptors [BR:
sjo04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
128381043 (nlrc3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
NACHT
NLRC4_HD2
NOD2_WH
CARD
AAA_16
AAA_33
LRR_12
LRR_8
Motif
Other DBs
NCBI-GeneID:
128381043
NCBI-ProteinID:
XP_053196956
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All DBs
Position
20:17281834..17295417
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AA seq
1134 aa
AA seq
DB search
MERKTHYDSILDRSKRITWQDDCYVDLQSMSCLASSQAEMEDLNWVQKHQDQLQRFSTAS
FLEGMLGHLRKMDMLSSAEESKIKGVGRLQDQVNMLTTIVTGKDTQSSDALRGFIESSDS
QVAQLIINHDSMVKEHKEVLLQRYEQLRDRDSCSCPKLNISSRNLLLVDGLSDLQQKEHD
LMQVGATRGGKRNHLRQLGLAKLLDPLTRVSMPPRVSLTVGVAGIGKTTWVRHFVRQWSQ
GAICTDVSFVLPFTFCELNSLEKLSAEKLVKMAFPHLKDPNLVLNSSCRTLLILDGLDEF
RCTLNFSDAVSCNDPKKEVSVDDLITNIIRGNLLPDVAVWVTSRPGVASLIPGGLVDRVT
EIPGFSPKDIHIFLNHHFSERDFATKIWAHLESHKILMVMCYIPCFCWIVADTLMYIMQS
ETQETLPRTSTELYAHFCSMKAEVGEPRGREPVKMEQLHGSNRKLLGNLGRLAFYGLLKN
KYTFSEQDLRAYGIDLLLTQSSLGAGLLIREESVIYPTFRFTHLTLQEFLAATFYHVSSK
RAIFDLFSESTMSWPKIGFQNHFKSAFQHSQQAEDGHLDVFVRFLTGLLSPVVLKTLAGL
LAIGKDDGNQKAWAAGFLQSLLVSGGAVVSLRTVNLAYCLQELQHTDLLRSVEEDLRLGS
LGGKLTRAQCVVLGYLLHVSPECSEQINLSASLNYTTVKCLLPQLLYCGHLRLENNHFKD
DVMELLGSLLSAKDCHIQKMSLADNTISNKGAKALSRALLVNRTLTSLNLRNNNIGSKGA
KFLAEALKMNQVLVSINFQNNAIEEEGAQALAEVLQCNRKLVSLNIRKNTIGAVGAKRIA
DALKTNRTLTKLILCSNQLGDKGTVALAEALTVNHTLLSLQLQSNSISNKGMTALTKALR
QNRGLISLNLRENSIGVEGAKNMAKALHENNSLQDLDLTANLLHDEGVQAIAGAIKCNQG
LTSLHLQWNFIKTSATKALAHALVSNTTMQLLDLQENAIGNEGVIFLAEALKTNTCLRTL
CLQGVSAGTSGAVAIAGALMTNQCLQTLDLRGNAVGMEGAKALANALKSNRSLKSLNLQE
NSLGMDGAIFIATALQGNHQLTYINLQGNGIGQSGAKVISDAIRTNAPGCVVDM
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggagaggaagacgcattacgattcgatcctggaccgaagcaaacgcattacgtggcag
gacgactgctatgtggatcttcagtctatgtcgtgcttggcctcttcacaagcagagatg
gaggatcttaattgggtccaaaagcatcaagaccagctgcaacgcttcagtacagcctct
ttcctagaggggatgttaggccacctgcgaaagatggatatgctgagttcagcggaggag
tccaagatcaagggagtgggccggttgcaggaccaggtcaacatgctcacaactattgtc
actggcaaggacactcaaagctctgatgccctgcggggcttcatagagagttcagattct
caggtggcccagctcatcataaaccacgattccatggtgaaggagcacaaagaggtgctt
ttgcagcgatatgagcagctcagagacagagattcatgcagctgtcccaaactgaacata
tcatccagaaacttacttctggtcgatggactttctgacctccagcagaaggagcatgac
ttgatgcaggtgggggcaactcgtggagggaaaagaaatcatctcagacagctgggcctg
gccaaactcttggacccgctcacccgggtcagtatgcctcccagggtctccctcacagtt
ggggtggctggtatcggcaagaccacctgggtccgacacttcgtcagacagtggagccaa
ggggccatctgtacagatgtgagctttgtcttgcctttcaccttttgtgagctgaactcg
ctggagaagctttcagctgaaaagctggtgaagatggcttttcctcatttaaaagacccc
aatctggtcctgaacagctcctgtcggacactgctcatccttgatggtttggatgaattc
cgctgcactttaaatttctcagatgcagtatcttgcaatgacccaaagaaagaagtgtcc
gttgatgacttaattactaacatcatccgagggaatcttctccctgacgtagcagtgtgg
gtcacttccaggccaggagtggcctcactcatacctggaggattggttgacagggtgact
gagatccctggattcagtccgaaggacatccacatcttcctaaaccaccacttctccgag
agggattttgccactaaaatatgggcacacctggaatcccataagatcttaatggtgatg
tgttacataccatgtttttgctggatagtggctgatacattgatgtacatcatgcagagt
gaaacccaagagacccttcccaggactagtactgagctctatgcccacttttgttccatg
aaggcagaagtaggtgaaccaagaggcagggagcctgtaaagatggagcagctccatggg
agcaatcgcaaactactggggaatcttggccggctggcgttttatggactccttaaaaac
aagtacaccttcagtgagcaggacctccgggcctatgggatagacctactgttaactcaa
agtagtcttggtgctggacttcttattcgggaggagtcagtcatatacccaacattccgg
ttcactcatttaactctgcaggagtttctcgcggccaccttctaccatgtgtcttccaaa
agggccatctttgacttgttctcagagagcaccatgtcctggcccaagattggtttccag
aaccacttcaaaagtgcctttcagcactcacagcaagctgaagatggtcacctggatgtg
tttgtgcgcttcctgacaggtctgttgagcccagtggtattgaaaactctcgctgggctt
ttggccattgggaaagatgatggcaaccagaaggcatgggcagcagggtttctacaaagc
ctattggtcagcgggggtgctgtggtatccctacgtacagtcaacctggcttattgtcta
caggagctgcaacacacagatctattgcggagtgtagaggaggatctacgacttggtagt
ctgggtgggaagttaacacgagctcaatgcgttgtgctgggctacctgctgcatgtttct
ccagagtgcagtgaacagatcaacctatcagcctctctgaactacacaacagtaaaatgc
ttgctcccacagctgctgtactgcggccatctcaggttagaaaataatcacttcaaagat
gatgtaatggaattgctgggaagcctcctgagtgccaaagactgccatatccagaagatg
agtttagcagataatactatcagcaacaaaggtgccaaggccttgagtcgagcccttctg
gtgaaccggacgctaacttctctcaatctcaggaacaacaacattggctcaaaaggtgct
aagtttctggcagaagctctaaaaatgaaccaagtgctggtatcaatcaacttccagaac
aacgccattgaggaggaaggtgctcaggccctcgcagaagtcctgcaatgcaaccgcaaa
ctggtgtctctgaatataaggaagaacacgattggagctgtcggagccaaacggattgca
gatgcgctgaagacaaaccggactctcacaaaactgattctttgtagtaaccagctcggg
gacaaaggaacagtcgctctggcagaggctttgaccgtcaaccacactttgctctcactt
caacttcagagtaactcaatcagcaacaaggggatgacagccttaaccaaagcacttaga
cagaaccggggcctcatctctttgaatttaagagagaactcaattggggtggagggagca
aagaacatggcaaaggccctccatgagaacaactctctccaggaccttgatctcacagcc
aacctgttgcacgatgaaggggttcaagctatagcgggcgcaatcaagtgtaatcaaggc
ctcacctctttgcatctgcagtggaatttcatcaagacctctgccactaaagctctggca
cacgcacttgtctccaacaccacaatgcagctcctggatctgcaggagaatgctattggg
aatgaaggtgtcatttttctcgctgaagccctgaaaaccaacacatgtcttcgtacatta
tgtctccagggggtctcagcaggaacaagtggtgcggttgcgatagcaggggctctaatg
accaaccaatgcctgcaaacattagatctgcgtggaaatgctgtaggtatggagggagcg
aaggccctggcgaacgccttgaaaagcaacagaagcctcaagtctttgaatctgcaggag
aactctctgggtatggatggagccatattcattgcaacagccctgcaaggaaaccaccag
ttgacatacataaacttgcagggaaacggcattggacaatctggagcaaaagtcatatct
gatgccataagaaccaacgctccaggctgtgtggtggatatgtga
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