Scomber japonicus (chub mackerel): 128381045
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Entry
128381045 CDS
T09718
Symbol
sec24c
Name
(RefSeq) protein transport protein Sec24C isoform X1
KO
K14007
protein transport protein SEC24
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128381045 (sec24c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128381045 (sec24c)
Membrane trafficking [BR:
sjo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
128381045 (sec24c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
128381045
NCBI-ProteinID:
XP_053196958
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All DBs
Position
20:7816477..7834754
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AA seq
1207 aa
AA seq
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MNVNQHTPMASPYGQPQPGYGQPTYAPLDGGYPAPYAPYNGPASAYQPGAPPQGPARPTP
TSGPPPVSAPQQYNQYSHSQGDMQNGPPPMTQAPPRPAVSQPYNQGAMNLTGPPHPSYPQ
HYGPPASMQQVTNQMTGMQITSGPPTPAGPGYAPPHSSQPPVSTAFPGGPPPSYTQASPP
AASSAPTQPPPPSGPAASQQYYGGPPPSQQPFNSSLPPTSQQQFVSSAPPPPSSQQQFPP
SSYAGPVPPPSQAPAPPPVSQAQQSFPPTQPPFSSAPPVSQPAFMSGPPPAAQGSFPPQA
TPPSSQPGSFPPPGPPPATGPSVQYPGPMPPQMQPPPSQPSPYHSGPPPPRAQMPPTSMA
QSNHMPPGPQGPPGPPGPMQQPPPQPGMQGGYPPQQNGAFGQVRGPQPGYAGPYPGQPNY
GAPAPAPAPAPAPQKRLDPDAIPSPIQVIEDDKAKSTEPFTTGVRGQAPPLVTTNFQVKD
QGNASPRFVRCTAYNMPCTADMAKQSQVPLAAVIKPLATLPPDETPPYLVDHGEGGPIRC
NRCKAYMCPYMQFIEGGRRFQCGFCSCVTEVPPNYFQHLDHTGKRVDCYDRPELSLGSYE
FQATVDYCKNNKLPQPPAFIFLIDVSYNAVKSGMVNIVCQELKTLLDYLPRENPEMESVV
RVGFVTYNKVLHFYNVKASLAQPQMLVVSDVSDMFVPLLDGFLVNVNESRLVIESLLDQI
PEMFADTRETETVFGPVIQAGLEALKAADCAGKLFVFHTSLPIAEAPGKLKNREDKKLVG
TDKEKSLFQPQVGFYNTLAKECVAQGCCVDLFLFPNQYVDVATLGVVPVSTGGSVYKYTY
FQAQADQERFLNDLRRDVQKLVGFDAVMRVRTSTGIRATDFYGSFFMSNTTDVELAGLDC
DKAITVEFKHDDKLSEETGALMQCAVLYTSCSGKRRLRIHNMAVNCCSQLADLYRNCETD
TIINFFSKYAFRGLLNNPTKAVRDTLVNQCAQILACYRKNCASPSSAGQLILPECMKLLP
VYLNCVLKSDVLMPAADISLDDRAYLRQLISCMDVAETHVFFYPRLLPLTKLECGSLPMA
LRNSEERLSKGGVYLLETGLHLFLWVGASVQQELLLNIFGTQSFSQIDPSMTNLPVLDNP
FSQRLREIIDSFRAQRSRYMKLMVVKQEDRTELIFRHFLVEDKSASGGASYVDFLCHMHK
EIRQLLS
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtaaaccagcacactcctatggcctctccttatggccagccccagcctggctat
ggtcagcccacctatgctcctctggatggaggataccctgctccctacgcaccttacaac
ggccctgcttcagcctaccagcctggagctccgccacaaggtcctgccaggcccaccccc
acctctggaccccctccagtatcagcccctcagcagtacaatcagtacagtcatagtcag
ggggacatgcagaatggacccccacctatgacacaggcaccacccaggcctgctgtgtct
cagccatacaatcagggagctatgaacctgacagggcccccgcacccctcctatccacaa
cactacgggcctccagcctcaatgcagcaggtcaccaaccagatgactgggatgcagatc
acttctggaccccctacaccagcggggcccggatatgctccacctcacagctcacagcct
cctgtcagtactgccttcccgggtggtcctccgccctcctacacccaagcctcaccccct
gcagcatcctctgctcccacccagccgccacctcccagcggccccgcagcttctcagcaa
tactacggaggcccacctccctctcaacagccattcaactcgtctcttccccctacctct
caacagcagtttgtctcctctgcacctccgcctccttcgtctcagcaacagtttcctcct
tcctcctacgcgggtcctgtgcctccacctagtcaagctcctgctcctccacctgtgtcc
caggcacagcagtccttccccccgacacagccccccttctcctcagcacctcctgtcagc
cagcctgccttcatgtccggcccacctcctgctgcccagggctccttcccacctcaagca
acccccccttcctctcagcctgggtcgtttcctcctccaggtcctcctccagctacaggc
ccctctgttcaatacccaggccctatgccaccccaaatgcagccgcctccatcccagcca
tccccctaccactctggtccacctcctcccagagctcagatgcctcccacatccatggcc
cagagcaaccacatgcctccaggaccacagggcccaccaggacctcctggtcctatgcag
cagcctccacctcagcctggcatgcagggaggataccctcctcagcagaacggtgcattc
gggcaggtgaggggccctcagcccggctatgcaggcccttatccggggcaaccaaactat
ggagctcctgcaccagcaccggctccggctccggccccacagaaaagactcgacccagat
gccattcctagcccgatccaagtaatcgaagatgacaaagctaagagcaccgagccgttt
actacaggggtcaggggtcaggccccaccactggtcaccaccaactttcaggtcaaagac
caagggaacgccagccccaggtttgtccgctgtacggcctacaatatgccttgcacagcc
gatatggccaagcagtctcaggtgccacttgccgccgtcatcaagcccctcgccacactg
ccgccagatgagactcctccatacctggtggaccacggtgagggcggtccaatccgttgc
aaccgctgtaaggcctacatgtgtccgtacatgcagttcatagagggaggacgccgcttc
cagtgtggcttttgcagctgcgtcacagaggttcctccaaattatttccagcatctggac
cacactggtaagagggtggactgctatgacagaccagagctttcactgggcagctatgag
ttccaggccactgttgactactgtaaaaacaacaagcttcctcagcctccagccttcatc
tttcttattgacgtgtcctacaacgctgttaagagcggcatggtcaacattgtctgccag
gaactcaagaccctcttagactacctgcccagagagaacccagaaatggagtctgtggta
cgggtgggcttcgtcacctacaacaaggttttgcacttctacaacgtcaaggcgagcctg
gcccagcctcagatgttggtggtgtctgacgtatcggacatgtttgttccactgctagac
ggcttcctggtcaacgtaaacgagagccggctagttatcgagagtttgctggaccagatt
ccagagatgtttgcagacaccagggagacagagacagtctttggacccgtcatacaggca
ggactggaagcactcaaggctgcagattgtgcagggaagctgtttgtgtttcacacctct
ctgcccatcgctgaagctccaggaaaactaaagaatagagaagacaagaagctcgttggg
acagataaggagaagtctctgtttcagccccaggtgggtttctacaacactctggctaag
gagtgtgtagcccagggctgctgcgtcgacctcttcctcttccccaaccagtatgtggac
gttgccacgttaggggtggttcctgtctccactggaggttcagtctacaaatacacttac
ttccaggctcaggcagaccaggagcgattcctgaacgacctcagacgagacgttcagaaa
ctagtagggtttgacgctgtcatgagggtgcgaactagcacaggcattcgagcgacagac
ttctacggctccttcttcatgagtaacaccacagatgtggagctggcaggtctggactgt
gacaaggcgatcactgtcgagttcaaacacgatgacaagctcagcgaggaaactggagca
ctcatgcagtgtgcggtgctgtacaccagctgcagcggcaaaaggcgcctccgcatccac
aacatggcggtcaactgctgctctcagctggctgacctgtaccgcaactgtgagactgac
acaatcatcaacttcttctccaaatatgctttccgtggcctcctgaacaaccccaccaag
gcagtgagggacactctggttaaccagtgcgctcagattctggcctgctaccgcaagaac
tgtgcaagcccctcgtcagctggtcagctgatccttccagagtgcatgaagctgttaccg
gtctatctcaactgtgtgctgaagagcgacgtgctgatgccggcagctgacatctcattg
gacgaccgggcttacttgaggcagctgatcagctgcatggatgtcgcagagactcacgtc
ttcttctaccctcgcctgttgccactgactaagttggaatgcggctcattgccaatggca
ttgaggaactcagaggagaggctgtcgaaaggcggggtttacctcctggagacgggcctt
cacctcttcctgtgggtaggagccagcgtgcagcaagagctgctgctcaacatctttggc
acgcagagcttcagtcagatcgacccgagcatgacaaatctgccggtgctggataacccg
ttctcccagaggctcagagagatcatcgactccttcagagcacagagatcacgatacatg
aagctgatggtggtgaaacaggaagacagaaccgaactgatattcaggcacttcctggtc
gaggacaagagcgccagcgggggagcgtcgtacgtggacttcttgtgtcatatgcacaag
gagatccgccagcttctcagctag
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integrated database retrieval system
