Scomber japonicus (chub mackerel): 128381056
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Entry
128381056 CDS
T09718
Symbol
ldb3b
Name
(RefSeq) LIM domain-binding protein 3b isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128381056 (ldb3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
128381056 (ldb3b)
Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
128381056 (ldb3b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
128381056
NCBI-ProteinID:
XP_053196977
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All DBs
Position
20:complement(7624075..7637709)
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AA seq
290 aa
AA seq
DB search
MTTYTVNLNGPAPWGFRLQGGKDFNMPLTISRITPGSKASGGSLTQGDIISSIDGVSTDG
MTHLEAQNKIKCATSNLSLTMHKSRRPAPVHTTIARMDSPMPVIPHQKVIANTPANVEYT
PSFNPNALKDSALSTHKPIEVRGPGGKATIVHAQYNTPISMYSQDAIMDAIAGQSQAKGH
ESEEAGSPLAGSLPMKDPVVDCASPVYQAVIRPGENSQEMSEWARRAANLQSKSFRILAH
ITGTEYLQDPDEEALQRSREKFESEVKGPRFAKLKNWHQGLSSQILNIQE
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgactacatacacagtgaatctgaatggccccgctccatggggtttcagactacaggga
ggaaaggacttcaacatgccactcaccatctccaggataactccaggcagtaaagcgtcg
ggcggcagcctgacccagggagacatcatctcatccatcgatggggtcagcaccgatggg
atgacgcacctggaggcccagaacaagatcaagtgtgccacctccaacctgtcactgacc
atgcataaatcaagacgccctgcaccagttcacacaacaattgcaagaatggactcaccc
atgccagtcatcccccaccagaaggttatcgcaaacacacctgcaaatgtggagtacact
cccagcttcaaccccaatgctctgaaagactcagccctgtccacccacaagcccattgag
gtgaggggtccagggggaaaggccaccatcgttcacgcccagtacaacacacccattagc
atgtactcacaggacgccatcatggacgccattgcggggcagtcgcaggccaagggacac
gaaagtgaggaggcaggctcccccctggctgggtctctgcctatgaaggaccctgtggta
gactgtgcgtctccagtgtaccaggcagtgatcaggccaggtgagaactcccaggaaatg
tctgagtgggctcgccgtgctgccaacctgcagtccaagagtttcaggatcctggcccac
atcactggcaccgaatacctgcaagacccagatgaggaagccctgcagaggtcgagagag
aagtttgagtcggaggtgaaagggccccgctttgccaagctgaagaactggcaccaagga
ctgtcttcacagatcctcaacatccaggaataa
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