Scomber japonicus (chub mackerel): 128381107
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Entry
128381107 CDS
T09718
Name
(RefSeq) carcinoembryonic antigen-related cell adhesion molecule 5-like
KO
K06467
CD22 antigen
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128381107
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sjo04515
]
128381107
04090 CD molecules [BR:
sjo04090
]
128381107
04091 Lectins [BR:
sjo04091
]
128381107
Cell adhesion molecules [BR:
sjo04515
]
Immunoglobulin superfamily
SIGLEC family
128381107
CD molecules [BR:
sjo04090
]
Proteins
128381107
Lectins [BR:
sjo04091
]
I-type lectins (Siglecs)
128381107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_2
Ig_3
I-set
ig
Ig_5
V-set
Ig_4
C2-set_2
Ig_CD22
Ig_6
Motif
Other DBs
NCBI-GeneID:
128381107
NCBI-ProteinID:
XP_053197037
LinkDB
All DBs
Position
2:complement(6591603..6605173)
Genome browser
AA seq
631 aa
AA seq
DB search
MVVYSVSQHALENGWGVTYTSTHICALKGSTVYIHCTYSYPSRINNVDTVVDETFWFTKE
SINEHVDLKTVSEYAGRVQYHCDKNDCTLRITDLRERDSAEYKFRFITNQPGGKYTGFPG
ITLTVRDLQVKVIPSTINHSLAELKCHSSCRLPDRSSFIWYKNGQKINRQASSSYTTNFN
HTDSYSCAVAGHEDFPSRSVYAPKLPSVSVSPSGEIIEGSSVTLTCSSDANPAAKYTWYK
KNVNPDLQPLSKEPQLVFSSIQSSDSGEYYCTAENQLGKRTSEYIFIDVKYAPKLPSVSV
SPSAEIVEGSSVTLTCSSDANPAANYTWYKDNQTLLQRSEGHFHFTSISSEDKGIYYCKS
ENKYGLINSSFLFIDVKYAPKLPSVSVSPSGEIIEGSSVTLTCSSDANPAAKYTWYKENV
NPDLQPLSKEPQFIFSSIQSSDSGEYYCTADNQLGKRSSEYIFIDVKYAPKLPSVSVSPS
AEIVEGSSVNLTCSSDANPAANYTWFKKNEDSPKASGQIFTITDVRPEHSGNYYCEAQNR
RGRHNSTLHLIVVKGKSVLMMIIIGLTLAVLILIPLLLLILKKKALSSTTELNELVWTIE
LDSCPVYENVSDGRVNTAAETDNEKVYENLK
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgtattcagtgtctcaacatgcactagagaatggctggggagtgacttacact
tctactcacatctgtgccttaaaaggatcaacagtgtacatacactgcacctacagttac
ccatccaggataaataatgttgatactgtagttgatgaaacattctggtttactaaagag
agcattaatgaacatgtggatctgaaaacagtctcagagtacgcaggtcgtgtgcagtat
cactgtgataagaacgactgcactctgagaatcacagacctgagagagagagactcagct
gagtacaagttcaggttcataacaaaccaaccaggagggaaatatactggtttccctgga
atcactttgactgtcagagatctgcaggtgaaggtgatcccatcaacaatcaatcattcc
ttagcagagctgaagtgtcacagcagttgtcgtctacctgatcgttcttccttcatctgg
tacaagaatggacagaaaattaatagacaagcatcttcttcttatacaaccaacttcaat
catacagacagctattcctgtgctgttgcaggacatgaggatttcccctctcgttcagtt
tatgctccaaagcttccctctgtgtcagtgagtccctctggtgaaatcattgagggcagt
tcagtgactctgacctgtagcagtgatgctaacccagcagctaaatacacctggtacaag
aagaatgtaaatccagaccttcaacctctcagtaaagaaccacagcttgtcttcagctcc
atccagtcctctgactctggagagtattactgtacagctgagaaccagctggggaagagg
acatctgaatacatctttattgatgtgaaatatgctccaaagcttccctctgtgtcagtg
agtccctctgctgagatagtggagggcagttcagtgactctgacctgtagtagtgatgct
aacccagcagctaattacacctggtacaaggacaaccaaacactacttcaaaggtcagaa
ggacattttcatttcacttccatcagctctgaggacaaagggatctactactgcaagtct
gaaaataaatatggacttatcaactcttcatttctattcattgatgtcaagtatgctcca
aagcttccctctgtgtcagtgagtccctctggtgaaatcattgagggcagttcagtgact
ctgacctgtagcagtgatgctaacccagcagctaaatacacctggtacaaggagaatgta
aatccagaccttcaacctctcagtaaagaaccacagtttatcttcagctccatccagtcc
tctgactctggagagtattactgtacagctgacaaccagctggggaagaggtcatctgaa
tacatctttattgatgtgaaatatgctccaaagcttccctctgtgtcagtgagtccctct
gctgagatagtggagggcagttcagtgaatctgacttgtagcagtgatgctaacccagca
gctaattacacctggttcaagaagaatgaagactcaccaaaagcatcaggacagatcttc
accatcactgatgtcagacctgaacacagtgggaattattactgtgaagcccagaacaga
agaggtcgtcataactccaccttacatctgattgttgtgaaagggaaatcagtattaatg
atgatcatcattgggttgactctggcggtcctgatactgattcctctgcttctcttgatt
ctgaagaagaaagctctgagctccaccactgaactgaatgaacttgtatggactatagag
ctggactcttgtcctgtatatgagaacgtctcagacgggcgggtcaacactgcagcagag
acagacaatgaaaaggtctacgaaaacctgaagtaa
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