Scomber japonicus (chub mackerel): 128381113
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Entry
128381113 CDS
T09718
Name
(RefSeq) nucleolar transcription factor 1-like
KO
K09273
upstream-binding transcription factor
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128381113
03021 Transcription machinery [BR:
sjo03021
]
128381113
Transcription factors [BR:
sjo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
128381113
Transcription machinery [BR:
sjo03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
128381113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
RNA_pol_Rpb5_N
Myb_DNA-bind_4
Phe_tRNA-synt_N
DIOX_N
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
128381113
NCBI-ProteinID:
XP_053197040
LinkDB
All DBs
Position
20:complement(15248932..15255870)
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AA seq
363 aa
AA seq
DB search
METEQSEWTKADLQKLLATIKTNITDKDRMKVFYQGVKSVDWDKVAFPPFSPEACQEKWD
EMCRKMRKFRTLTELVVEAEDVISDPSQNQKIHPELPKTPLPPSALFYKENVTKFHKKKP
NLKPSALMSVVLKEFKALPYEEKAKYKKKYQLAKDEYDRSMDKFREQYEDAPVHGEKRKK
VSEHTQNGNKRHAKSRKTFPGEPKIPSQTANQIFFKETLKKTNVKLPRTSERFNKIHHMW
KDLPNKEKERYKDQCDDLFRKYTKRLQRWFKTLTTAEQKDYRICNPSKCQYLDDKHLKTN
NTDIHIISDSEDEDIAYSSSDEGEEWRGNRRSAAVTVLGDKPRCSQICRHHDNHGHIRPK
VTT
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atggagaccgaacaatcagagtggacaaaggcagaccttcaaaagcttctggctacaatt
aagaccaacatcacagacaaagacagaatgaaagtattttaccaaggagtaaagagtgta
gattgggataaagtggctttcccccctttctcgcctgaagcatgtcaagaaaagtgggat
gaaatgtgtcggaagatgcgcaaatttcggaccctcacagagctcgtcgttgaagctgaa
gatgtcatttctgatcctagccagaaccaaaagatccatccagaactcccgaaaacacca
ttgccaccctctgccttgttttataaggaaaacgtcaccaagtttcataagaagaaacca
aacctgaaaccaagtgcactaatgtcggtggtattgaaagagttcaaggcactcccatat
gaagaaaaggctaaatataagaagaaataccagcttgcaaaagatgaatatgacagaagc
atggacaagttcagggaacagtatgaagatgctcctgttcatggggagaagaggaaaaag
gtttctgaacacacccaaaatggtaataaaagacatgcgaagtctagaaagacatttcct
ggtgagccaaagataccctctcagactgccaatcaaattttcttcaaagaaacgttgaaa
aaaacaaacgtcaaattaccaagaacaagtgaacgcttcaacaagatccatcacatgtgg
aaggacctccctaacaaggagaaggaacgctacaaggatcaatgtgatgacctcttcaga
aaatacacaaagaggctgcagaggtggtttaagacgttgacaacagcagaacagaaagac
tatcggatctgtaaccccagtaaatgtcaataccttgatgacaaacacttgaaaactaac
aacacagatatccacataatatcagattcagaagatgaagacatcgcatacagcagcagt
gatgaaggagaagagtggagaggtaatcgccgcagtgcagcagtaacagtgctgggggac
aagcctcgctgtagtcaaatctgtcgtcaccacgacaaccacggacacattcggcccaaa
gtcaccacttaa
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