Scomber japonicus (chub mackerel): 128381253
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Entry
128381253 CDS
T09718
Symbol
rac1a
Name
(RefSeq) ras-related C3 botulinum toxin substrate 1
KO
K04392
Ras-related C3 botulinum toxin substrate 1
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04010
MAPK signaling pathway
sjo04145
Phagosome
sjo04148
Efferocytosis
sjo04310
Wnt signaling pathway
sjo04370
VEGF signaling pathway
sjo04510
Focal adhesion
sjo04520
Adherens junction
sjo04530
Tight junction
sjo04620
Toll-like receptor signaling pathway
sjo04810
Regulation of actin cytoskeleton
sjo05100
Bacterial invasion of epithelial cells
sjo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128381253 (rac1a)
04310 Wnt signaling pathway
128381253 (rac1a)
04370 VEGF signaling pathway
128381253 (rac1a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128381253 (rac1a)
04148 Efferocytosis
128381253 (rac1a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
128381253 (rac1a)
04520 Adherens junction
128381253 (rac1a)
04530 Tight junction
128381253 (rac1a)
09142 Cell motility
04810 Regulation of actin cytoskeleton
128381253 (rac1a)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
128381253 (rac1a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
128381253 (rac1a)
05100 Bacterial invasion of epithelial cells
128381253 (rac1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128381253 (rac1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sjo04147
]
128381253 (rac1a)
04031 GTP-binding proteins [BR:
sjo04031
]
128381253 (rac1a)
Membrane trafficking [BR:
sjo04131
]
Exocytosis
Small GTPases and associated proteins
Rho GTPases
128381253 (rac1a)
Endocytosis
Lipid raft mediated endocytosis
Arf6-dependent endocytosis
128381253 (rac1a)
Macropinocytosis
Ras GTPases
128381253 (rac1a)
Others
NADPH oxidases (Nox) and associated proteins
Nox associated proteins
128381253 (rac1a)
Exosome [BR:
sjo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128381253 (rac1a)
Exosomal proteins of other body fluids (saliva and urine)
128381253 (rac1a)
Exosomal proteins of colorectal cancer cells
128381253 (rac1a)
Exosomal proteins of bladder cancer cells
128381253 (rac1a)
GTP-binding proteins [BR:
sjo04031
]
Small (monomeric) G-proteins
Rho Family
Rac/Cdc42 [OT]
128381253 (rac1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
CagD
Motif
Other DBs
NCBI-GeneID:
128381253
NCBI-ProteinID:
XP_053197187
LinkDB
All DBs
Position
20:complement(18585678..18590834)
Genome browser
AA seq
192 aa
AA seq
DB search
MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG
QEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLR
DDKDTIEKLKEKKLSPIIYPQGLAMAKEISAVKYLECSALTQRGLKTVFDEAIRAVLCPP
PIKKRKRKCVVL
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccattaagtgtgtggtagtcggggacggggcggtgggtaaaacatgcctgctc
atcagctacactaccaatgccttccctggagagtacatccccacagtcttcgacaactac
tctgccaatgtgatggttgatgggaaaccagtgaacctgggcctgtgggatacagcagga
caggaggactacgacagactgagaccactgtcctacccacagacagatgttttcctgatt
tgcttttcactagtcagtccagcctcttttgaaaacgtccgtgccaagtggtacccggag
gtgagacaccactgccccaacacgcccatcatcctggtgggcaccaagctggacctgaga
gatgacaaggacaccatcgaaaagctgaaggagaagaaactctcccccatcatctacccc
cagggcctggccatggctaaagaaataagtgcagtgaagtatctggagtgctcagctctg
acgcagcgcggccttaagacagtgtttgacgaagccatcagggcggtcttgtgcccccca
cccatcaagaagaggaagaggaagtgcgttgtattgtaa
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