Scomber japonicus (chub mackerel): 128381259
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Entry
128381259 CDS
T09718
Symbol
faap100
Name
(RefSeq) Fanconi anemia core complex-associated protein 100
KO
K10993
fanconi anemia core complex 100 kDa subunit
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
128381259 (faap100)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sjo03400
]
128381259 (faap100)
DNA repair and recombination proteins [BR:
sjo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
128381259 (faap100)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCAA
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
128381259
NCBI-ProteinID:
XP_053197192
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Position
20:complement(18521491..18526175)
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AA seq
871 aa
AA seq
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MEGRCAVETLAEFGFSATSFTEKVLLCFGTDVCICTGSEEVYVFNTQERKLKAVLQFPAA
VSDLVASHDKQLLYVACRSGVYCVSSSFLLSRVQSSLADASSSLAQLKITSEFLVVEEEG
VSSLLLVGSALLSLSQRDTSWLLTLYKTPTHSVSSSYELLSSFNLPLVSAVAHDSTEGKS
GLRRRPVLMCVHSGDTTLPSSSCASSSEAALTGGHFHLEPVLFKLLFGIDTALAKSPVIL
CGLPDGRLCFLPLRLPGSRLKVLHNLEQPVIFVRASVVMETSEGHAQCLVAVGEQGRVVL
IKVDEGGPEGRGMIAGFTEGCVPGPVLCACVDKHCLYYSTGSDLLALDLSEGSSGRAVQG
RDEDSYSKTVAALQSPTSLNVCRVIALTERTYNSAGETQLLGLSSRGQLQIMTLPVERDD
AGSSGLPSTQVGRSVRDLLSAIGDACERASCLKTAIKSKNQTLRHLNQVLNISFLLAANA
NSAEQPPIQEKPIRCHAVTTWSRLLQKDSLNLKCILNNGSPYLLERGWTLNITVFPLSCS
FSAGGESSSTNFSFPFHNLHPGEKLEVSLPLATTGGTSFPITVSCSLIFSLASLLGEEEA
ANLPGSQSTCISLPLNTLTVDWLHALQVNGPTATHKNTTSQSNNITTADPIQAFLMSRQM
RCRGRGDGGGESAPNPEKEQYSASVRVSSELLRDTVMLKTSDSDLHGAKLAPPNVCFSLL
DWLLSEGPGGVETGQQRDKINSSSVHARDPNGHTVKLTAKEAKHLLTRDESQAIVEVQVE
SSSMAAVCGVHHAVLRRVQTLMQRAPERAASSMRMQSLGLRQALQLAERLLQQIQQSRIS
GAFGVGVSAGQMTRSLLSVYRELRENPLLII
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaaggtgtgctgttgagactttggcagagtttggcttctcagcgacgtcgttc
acagaaaaggtcctgctctgttttgggacagatgtgtgcatctgtactggcagcgaggag
gtctacgtcttcaatacccaagagagaaaactcaaggctgtcctccagtttcctgctgca
gtgagtgacctggttgcgagccatgacaagcagctcctatatgtagcctgtaggagtgga
gtttactgtgtcagctcatcatttttgctatcgagggttcaaagctccctggctgatgca
tcctccagtctggctcagcttaaaatcacctcagagtttcttgtcgttgaagaggaagga
gtgtcgtctctgctcctcgtcggctctgcactcctcagcctttcccagagagacacgtcc
tggctgttgactttgtacaaaacgccaacacattcagtatccagcagctatgagttgctc
agttcattcaatctcccactggtctcagctgttgcgcatgatagcacggagggaaagagt
ggactaaggagaaggcccgtgctaatgtgcgtccactctggcgatacaacactaccatcg
tcttcctgcgcttcttcatctgaggcagctttaactggtggccactttcacctggagccc
gtcctcttcaaacttctgtttgggattgacacggctctcgccaaatcaccagttatactc
tgcggcctgccagatgggcgcctgtgtttcctccctctgcgtctcccaggatcaagactc
aaggtcctgcataaccttgagcaaccagtcatatttgttcgggcatctgttgtcatggaa
acgagtgaaggacatgcacagtgtttggtggcagtgggcgaacaagggagagtggtgctg
ataaaagttgatgagggagggccagagggaaggggtatgatagctggttttacagaaggt
tgtgtaccagggcctgtgttgtgtgcctgtgtggataaacactgtctatactacagcact
ggttcagacctgctggcactggatctatcagagggatcatctggtagagcagtgcaagga
agggatgaggattcatacagcaagacagtagctgcccttcaaagccccaccagtttaaat
gtgtgtagagtcattgcattgactgaacgcacatacaactctgcaggtgaaactcagctg
ctggggctgtctagcagaggacagctgcagataatgaccttgcctgtagagagagacgat
gcaggatcatctgggctcccttccacacaggtgggccgcagcgtgcgggacctactgtca
gctattggagatgcttgtgaaagagcatcctgtctgaaaactgccatcaaatccaaaaac
caaactttgaggcacctgaatcaggtgctcaacatcagcttcctgttggcagccaatgca
aacagtgcagaacagcctcccatccaggagaagccaattagatgtcacgctgtaaccact
tggagcagattgcttcagaaagactccttgaacttaaaatgtatcctgaataatggaagt
ccttatctactggaacgaggctggacactgaacatcactgtgtttcctctctcctgctcc
tttagtgcaggaggggaaagctcctccacaaatttttcattcccctttcacaatctgcat
ccaggggaaaagctggaggtgtcactgcccctagcaactacaggtggcacatccttcccc
attacagtcagctgctcactcatcttctcactcgcaagtctccttggagaggaggaggcg
gcaaaccttcctggctcacagagcacctgcatcagtttgcccttgaacacactgacagtg
gattggttgcatgccctgcaggtgaacggtcccacagccacgcacaagaacaccacatct
caatccaacaacatcaccaccgctgatcccatccaagcttttttaatgtcacgccagatg
aggtgcagaggaagaggggacggaggaggagagagcgctccaaaccctgagaaggagcag
tattcggcaagtgtgagggtgtcgtcagagttactaagagatacagtaatgttgaaaacc
tcagattcggaccttcatggggcaaagttggctcctccaaatgtatgcttttctctactg
gattggctgttgtctgaaggtcctggaggagtggagacgggacagcaaagagacaagatc
aacagctcctctgtccatgctcgagatcccaatggacacacagtcaaactaactgcaaaa
gaggcaaagcatctcctaacaagggacgagtctcaggccatagtggaggttcaagttgag
agctcatctatggcagcagtgtgtggggtgcaccacgctgtcctgcgtagagtacagact
ctgatgcagagggctcctgagagggctgcctcctcaatgaggatgcagagtttaggttta
agacaagcactacaactggctgagcgcctcttgcagcagatccagcagagtcgtatctct
ggggcctttggtgtgggtgtgtccgcagggcagatgacccgatctctcctcagcgtgtac
cgagaactgagagaaaatcctctcctcataatttaa
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