Scomber japonicus (chub mackerel): 128381274
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Entry
128381274 CDS
T09718
Symbol
itga3b
Name
(RefSeq) integrin alpha-3b
KO
K06482
integrin alpha 3
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04510
Focal adhesion
sjo04512
ECM-receptor interaction
sjo04810
Regulation of actin cytoskeleton
sjo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128381274 (itga3b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128381274 (itga3b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
128381274 (itga3b)
04810 Regulation of actin cytoskeleton
128381274 (itga3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sjo04147
]
128381274 (itga3b)
04515 Cell adhesion molecules [BR:
sjo04515
]
128381274 (itga3b)
04090 CD molecules [BR:
sjo04090
]
128381274 (itga3b)
Exosome [BR:
sjo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128381274 (itga3b)
Cell adhesion molecules [BR:
sjo04515
]
Integrins
Integrin alpha subunits
128381274 (itga3b)
CD molecules [BR:
sjo04090
]
Proteins
128381274 (itga3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP
FG-GAP_3
FG-GAP_2
Collectrin
Fer4_22
Motif
Other DBs
NCBI-GeneID:
128381274
NCBI-ProteinID:
XP_053197212
LinkDB
All DBs
Position
20:complement(18108234..18135579)
Genome browser
AA seq
1081 aa
AA seq
DB search
MNSPKMSPRLFLCAVIAVYHGTQTCSGFNIDERFPVIKVGKTKGSFFGFSVAMHQQTEGS
RQYLLLAGAPKEKAMSLQNVNETGAVYSCPITTDTIDCSRMDLVSTTNPSEMVEGMWLGV
TVASQRDQPAGRVLACGHRYVKIIQGGTEEQRRMIGKCYVRSNDLTYDPNDEWQTYSYEV
CNPNLGMEFEGMCNMGISAGMTDTDVYIGAPGSYVWQGDVHVTWRDPDPGNAWDSTGKYF
GQLNKRYSYMGYSVLEERKLLSHDDYTVVTGSPRAESKGAVMLGRKMAKKEIEVALIIPG
EQVGSYFGNSLAITDLNNDGWNDLIVGAPFYFDRKKDEGGAVYIYMNENGSFQTTPTTVL
KGPATSAFGFAVAAIGDINQDGFQDFAVGAPFQATGKVYIWMGSKNGISKNYSQVIEGKS
VGNGGFQTFGYSINGGMDMDDNSYPDILVGSLDDRIALLRARPVIHLTKNFTVGPHIVDP
NKCPGDTPCITAKICMSFTLSTGNKDFKKNITVKYTVEADMERRRSPRVRFHANKDDTYT
SLLSLPASKPRCHDLKLTVVSPVRDKLEPVVFSLSMSLNEQKPKARRSLQNLDFFPIISP
EQKLTQRTEIHFQKECGSDNKCTSNLQLNAQFVDDNKKPYPRQGKFQVLQFSSNIKIVQL
MVEVTNFPSEQKLAEDAHQAMLNVTIPDALIYSGVRSTDRDVECTFEGTVMCELGNPLKG
NEKVSLILKFETLGIDLYTQEVETDLLLSTVSEQSDLKPVAVALLIENTIRPSFSVANQM
VRTQFGGTVMGESAMVNTSDVGSLVEFTFIVNMRGQPLGDLGTLAVEFEWPFEVANGKWL
LYLTQIVIKGQSETECKPPGDVVNLLNLTLSESRSKRTKRQIRVDDVNDMDQPQIIEPQA
AITLNTRKEFYSLECSKGTARCVTFSCPLLNMTDSAKIYVRSRLWNSTMLEDFNNAQQIM
VRGEATLKLITDQLNIKMDSQTTSFSVDIEPVAGVEIPYELPLWIIISAAVAGILLLGII
ILILWKLGFFKRAVYYRIMPKHQGVKIRKAERYQFNLGFQPEEPQKKYWITNWTEMQHYY
Y
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcccaaaaatgtctccaagactattcctctgcgctgtgatagctgtataccac
gggacgcaaacctgcagtggatttaatatagatgaacggtttcctgtgatcaaagtgggg
aaaaccaaagggagcttctttggattctcagtcgcaatgcatcaacagacggaaggctcc
agacaatacctgcttctagcaggagcacccaaagagaaagccatgtccctacaaaatgtc
aatgaaacgggagctgtctactcttgtcccattacaacggacaccattgattgctccaga
atggacctggtcagcacaacaaatccatcagagatggtggagggcatgtggctgggtgtg
accgtggccagccagagagaccagccggcaggacgcgtgctggcatgcggacaccgttat
gtaaagatcatccaaggtggcacagaggagcagcgtcggatgataggaaagtgttacgtg
aggagtaatgacctgacctatgaccccaacgatgagtggcagacatacagttatgaggtc
tgcaatcccaacctcggcatggagtttgagggcatgtgcaacatgggtatctcagccggc
atgacagacactgatgtctacatcggcgcccctggcagctacgtgtggcaaggagatgtt
catgttacatggagagatccggatcctgggaatgcatgggactccactggaaaatatttt
ggacagctgaacaaacgatacagttatatgggttattcagttcttgaagagagaaagctg
ctgagccatgacgactacacagtggtgacagggtcgcccagggctgagtccaagggtgct
gtgatgttagggcgaaaaatggccaaaaaggagattgaggtggcactcatcatccctggg
gaacaagtgggctcgtacttcgggaacagcctggctatcactgacctcaacaatgatggt
tggaatgacctaattgttggtgccccgttttattttgaccgtaagaaggatgagggagga
gcagtgtatatctacatgaatgagaatggatctttccagacaactcccaccacagtactg
aagggtccagcaacgtctgcattcggctttgcagttgctgccattggtgatatcaatcaa
gatggattccaagactttgcagtgggagctccatttcaggccacaggcaaggtttacata
tggatgggaagtaaaaacggaatctcaaagaattacagtcaggtaattgagggtaagtca
gtgggtaatggaggtttccagacctttggctattccatcaatggggggatggacatggat
gacaacagttaccctgacatcttggttggctctcttgatgatcgcattgccctgctcagg
gctagaccagtcattcacttaactaagaacttcactgtcgggccacatattgtggatcct
aataagtgtcctggagatacaccatgcattacagcaaaaatctgcatgtctttcactcta
agcaccggaaataaagacttcaaaaaaaatatcacggtgaaatacacagtggaggccgac
atggagaggagaagaagtccccgtgttcgttttcatgccaataaagacgacacatacacg
agcctcctgagcctgccagcatccaaacccaggtgtcatgatctgaagctgactgttgtg
tcacctgtgagagacaaactggagccagtggtcttttccctcagcatgtccttaaatgaa
caaaaacccaaagccaggcgttccctgcagaacctggactttttcccaattatcagcccg
gagcagaaactcacacaaagaactgagattcactttcagaaggaatgtggctcggacaac
aaatgcaccagtaatctgcagctgaatgcccagtttgttgatgataacaaaaagccttac
cccagacagggaaaattccaggtacttcagttcagcagcaatatcaagatagtacagctg
atggtggaggtgaccaactttccttctgagcagaagctggctgaggacgcccaccaggcc
atgctcaacgtcaccatccctgatgccctgatatactctggtgtcaggtcgacggaccgc
gatgtagaatgcacttttgaaggcacagtgatgtgtgagttagggaatccacttaaagga
aatgagaaggtgtcactcatcctcaagtttgagacattagggatcgatctgtacacacaa
gaggttgagactgatctgcttctgtccactgttagcgagcagagcgatctgaaacctgtg
gctgtggccctgctgattgagaacaccatccgcccctccttctctgtagcgaatcaaatg
gtgcgaacacaattcggtgggactgtgatgggcgagtcagccatggtcaacaccagtgac
gtgggcagtctggtggagttcaccttcattgtaaacatgagaggtcagccgttaggagac
ctggggaccctggctgtggagtttgagtggccctttgaggttgccaatggcaagtggctg
ctgtacctgacacaaatcgtcattaaggggcaatcagagacagaatgtaaacctcctgga
gatgttgtcaacctgcttaacctaactttgtcagagagtagatccaagcgtacaaaacgg
cagatcagggtggacgatgtcaatgacatggaccagccacaaattattgagccacaggca
gcgatcacacttaacacacgaaaagagttctactcattggaatgctccaagggaacggca
cgatgtgtgacctttagctgtccattactcaacatgacggattcagccaagatttatgtg
aggtcccgtttgtggaacagtacaatgctcgaggactttaacaatgctcagcaaatcatg
gttagaggtgaagccacactgaagctcattacagatcaactgaacatcaagatggacagc
caaaccacctcgttctctgtggatatagaaccagtggcaggggtagagataccctatgag
ctcccattatggatcatcatttctgcagctgtagcaggaattctactactaggaatcatc
attcttatactttggaagcttggattcttcaagcgagccgtctactaccggataatgcca
aagcaccagggggtgaaaattcgcaaggctgagcgctatcagttcaatctgggttttcag
cccgaggagccacagaaaaagtattggatcaccaactggacagagatgcagcattactac
tactga
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integrated database retrieval system
