Scomber japonicus (chub mackerel): 128381291
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Entry
128381291 CDS
T09718
Symbol
trim16
Name
(RefSeq) tripartite motif-containing protein 16 isoform X1
KO
K12006
tripartite motif-containing protein 16 [EC:
2.3.2.27
]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128381291 (trim16)
Enzymes [BR:
sjo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128381291 (trim16)
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128381291 (trim16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
zf-RING_UBOX
ANCHR-like_BBOX
zf-RING_5
CC_BshC
Motif
Other DBs
NCBI-GeneID:
128381291
NCBI-ProteinID:
XP_053197240
LinkDB
All DBs
Position
20:complement(7029073..7038432)
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AA seq
633 aa
AA seq
DB search
MAATAAEEAAPTSKQQQKLCSVCSGVLSGDQPTACGHSVCDSCLGDTSKGCPESLKSLDK
PEPVKQNGTEAEAPAINSKEEQNQDSKTTEEIKIQEDLEESEDPKKPEEDKKEAEPQTNG
AEEEVKEEPLGPDDVVCDSCIESPCRALKSCLTCLVSYCEAHLRPHLENPKFQNHRLVEP
LRDIERRTCESHKWPLELFCCADDCCICQDCVTEDHKGHNTMPVVEARRQIERELKDKQT
EMVKTVTAAENAINKLQLNTVSIEHSVTEVRAVIESQFEELQAVVERAKREVAEILAGEE
KQALKQAEGIRVHLEQRCTELKKTQAQVEKLSKNKNDVDFLQEYSQWKKEATDTSLPGVY
IGLMDRLNSFSHVIVKSTEELCAMLVSSYIDKVKETCKNDKMGIKTTVQAIVAAKQNITL
PNPETRTDFLKYAAQVTFDGDTAHKFLRLTEENRKVTNTTPWQHPYPDVPERFENWRQVL
ATESFYLGRHYFEVDIGGEGTHIGVTYKSIDRKGSESNSCITGNNFSWCIQWNGRTFSAW
HSDVETPLSVEKFTRIGVYVNYQQGLLAFYGVNDTMTLIHEYKAEFLEPLYPAFWLSKKE
NIVALVAPGEPLPLKSPSPPTSPANGIVSKTAA
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggcagctacagcagctgaagaagcagctcccacctccaagcagcagcagaaactatgc
agtgtctgctcaggtgtcctgagcggagaccagccgacagcctgtggacactctgtttgt
gactcctgcctcggtgacacaagcaaaggatgccctgagagtctgaagagcctcgacaag
cctgaacctgtcaaacagaatggaacagaagctgaagcacctgcaattaacagcaaagag
gagcaaaatcaagattcaaagacaacagaggaaatcaaaatacaagaagatctagaggag
tctgaggatccaaaaaagcctgaagaggacaagaaagaggcagaaccgcagacaaatgga
gcagaagaggaggtgaaggaggaacctttgggccctgacgatgtagtgtgtgattcgtgt
attgagagcccctgcagagccctcaaatcctgcctcacctgcctggtgtcctactgcgag
gcacacctccggcctcacctggagaacccaaagtttcagaaccaccggctggtggagccg
ctcagggacatcgagaggcggacatgtgagagccacaagtggcccctggagcttttctgc
tgtgctgacgactgctgcatctgtcaagactgtgtgacggaggaccacaaaggccacaac
accatgcctgtggtggaggctcgcagacagatagagagggaactgaaggacaagcagact
gagatggtgaagacagtgacggcagcggagaacgccatcaacaaactgcaactcaacaca
gtctccattgagcattctgtgaccgaggtacgagcagtgattgaaagccaattcgaggag
ctgcaggcggtggtggagagggccaagcgggaggtggcggagatactggcgggtgaggag
aagcaggctctgaaacaagctgagggtatccgggttcatctggagcagagatgcacagag
ctgaagaagacacaagcgcaggtggagaagctctccaaaaacaaaaatgatgtggacttc
ctgcaggagtattcacagtggaagaaagaagccactgatacctccctgcctggggtctac
atcggacttatggaccgtctgaattccttcagtcatgtgatcgtcaagtctacggaggag
ctgtgtgccatgcttgtgtcttcatacatagacaaagttaaagagacgtgtaaaaatgat
aaaatggggataaagacaacagtccaggcgattgttgcagcaaaacagaacataacgtta
ccaaatccagagactcgtacagacttcctcaagtatgccgcccaggtgactttcgatggt
gacacagctcacaagttcctgcgcctgacagaggaaaacaggaaggtgactaataccaca
ccctggcaacatccttatcctgatgtacctgagcgctttgagaactggcgtcaagtgctg
gcaacagagagcttctatctggggcggcactactttgaggtggatatcggcggcgagggc
acacacatcggcgtcacctacaagagcatcgaccgaaagggaagtgaaagcaacagctgc
atcacaggtaacaacttctcctggtgtattcagtggaacggacgcaccttctccgcttgg
cacagtgatgtagaaactcctctcagtgtggagaagttcacccgtatcggggtgtatgtg
aactaccagcaaggcctcctggctttttacggagtgaatgataccatgaccctcatccac
gagtacaaggcagagttcctggagcctctttacccagctttctggttgtctaagaaagag
aatattgttgccttggttgcacctggagagccattaccgctcaaaagcccctctcctccc
acctcacctgcaaatggaattgtttcaaaaacagcagcatag
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integrated database retrieval system
