KEGG   Scomber japonicus (chub mackerel): 128381381
Entry
128381381         CDS       T09718                                 
Symbol
patl2
Name
(RefSeq) protein PAT1 homolog 2
  KO
K24823  protein PAT1 homolog 2
Organism
sjo  Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sjo03019]
    128381381 (patl2)
Messenger RNA biogenesis [BR:sjo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     128381381 (patl2)
SSDB
Motif
Pfam: PAT1
Other DBs
NCBI-GeneID: 128381381
NCBI-ProteinID: XP_053197363
LinkDB
Position
20:15551231..15558262
AA seq 714 aa
MSDSEQQQEAEIVSQPQWPENGEEWSDGEDGTNMDCGLLQAMAEEDEEINVHNEETFGMD
LDANGTTEDPSSTLLQFGELPPPLPKPQPPPDLKPPPSPHSSPSPPRHRPQYLPRACRGR
GQRGQRGGLGRGQMFEDPAVMRIIEGRPSLKTLDSAIVDCGNAMYQNTFEEDWMVPSYRK
ARKISGSILQDSAVVCVIDGHRGRGQHLTSNFLDLPYPVSSFRGRRGEPRGPYSRRQFGQ
RGFSQVHSPMMPGSPIFSRQPLTPQHQYNQTRSFMYPTSRPCPSTPRSLTPKMMQLRFGA
NSPRPSPFYSPSSNPVQHFRYPGPVTQLHPQHKRLLSQKQRLFQRKQEGWDSYFNLMTAK
EKEWITRLQMIQLQSENPYLEDYYYQEYYRRIEAKMAEEELGIRSKREPPKLTTPYITKT
DHQYTPVVHIEGSLGQVAVSTCYSPRHAISAVHAVQAQSPLEEQKDTRQQRLEVLSKIEK
LFMVLLEVEETERMKTPVLSEAEERRLMEKTQRKVEHIFSQLQHHDPLWEFLPFLLVSKG
KKLLARLLPFLKHDSAVKILRIVTTNLPILMSRDADEALPVLYPSLLKVIGSLTFSQLIG
VLRDLTSSESLTVYESLSLACQNKFGLSLLYGLLSKGEKLLSSGVPLEPSIGDFETWTDT
IFQVAGQLSQCSLVEPLLMPSNLLTLFCRYLDKRTVHQLKSNMESATGFVALPS
NT seq 2145 nt   +upstreamnt  +downstreamnt
atgagtgattcagaacagcaacaagaagcagagatagtgtctcagcctcagtggcctgag
aatggagaggagtggagcgatggagaggatgggacgaacatggactgtggactcctgcag
gctatggctgaggaggatgaggagatcaacgtccacaatgaggagacgtttgggatggat
ctagatgcaaatgggaccacagaggaccccagcagcactctccttcagtttggagagcta
ccgcctcctctaccaaaaccacaaccaccaccagaccttaaacctcctccatcccctcac
agctccccctcccctcccagacaccggccgcagtatctgccccgggcttgcagagggagg
ggacagaggggacagaggggagggctgggcaggggccagatgtttgaagacccagctgtg
atgaggatcatagaggggcgaccaagccttaagactctcgacagtgccatagtggactgt
gggaatgccatgtaccagaatacctttgaagaggattggatggtaccatcttacagaaag
gccagaaaaatctcaggatctatacttcaggacagtgctgtagtgtgtgtgattgatggt
cacagaggcagaggtcagcacctgacctccaacttcctggatttgccatatcctgtctct
tccttcaggggcaggagaggggaacccagaggaccctactccagaagacagtttggccaa
agaggcttctctcaggtacattcacccatgatgccaggatcacccattttctcacgtcag
ccgttaaccccacagcatcaatacaatcagacgagaagttttatgtatcctacaagccga
ccttgcccatccactcctcgatctctgactcctaagatgatgcaacttcgttttggtgca
aattcaccaaggccatcccccttttacagtccctcatctaatccagtgcagcatttcagg
tacccgggtccagtcacccagctccacccacaacataaacggctacttagtcaaaaacag
cgactgttccaaagaaaacaggagggctgggattcttactttaatctgatgacagccaaa
gagaaggagtggatcacccggctgcagatgattcagctacaaagtgagaatccatatctc
gaggactactactaccaggagtactatcgacgaatagaagctaagatggcagaggaagag
ctgggcatcaggagcaagagagagccacccaaactcaccacaccttacatcacaaaaact
gaccaccagtacacaccagtggtgcacattgaaggctctttgggtcaagttgctgtgtcc
acatgttactctcctcgccatgccatcagtgctgttcatgctgtccaagctcagagtccg
ctcgaggaacaaaaagacacaagacaacagcggttagaggtcctcagcaaaatagaaaag
ttgttcatggttttgttggaggtggaagagacggagaggatgaaaacccctgtcttgtct
gaagcagaagaaagaaggttgatggagaagacccagaggaaggtggagcacatcttctcc
cagctgcaacaccacgatcccctgtgggagtttcttcctttcctgctggtctcaaaaggc
aaaaagctactcgcccgtctgctcccgtttctgaaacatgattctgcagttaagatcctg
aggattgtgaccactaacctccctattcttatgagcagagatgcagatgaggctcttcca
gtgctctacccatctcttctgaaagtgattggaagcctgacattcagtcagctaattggg
gtcctcagagatctgacatcgtctgagtctcttacagtgtatgagtcgctctcactggcg
tgtcagaacaagtttggattgtccttactgtatggtctcctgtccaaaggagagaagttg
ctgtcctctggtgttcctctagagcccagcattggtgactttgagacctggaccgacaca
atattccaggtggcagggcagctatcacagtgttcactggtggagccgcttcttatgccc
tcaaacctgctcacgctcttctgccgttacctggacaagcggactgtgcatcagctgaaa
agcaacatggagtctgcaaccggattcgtggctcttccatcttaa

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