KEGG   Scomber japonicus (chub mackerel): 128381405
Entry
128381405         CDS       T09718                                 
Symbol
tob1b
Name
(RefSeq) protein Tob1b
  KO
K14443  protein Tob/BTG
Organism
sjo  Scomber japonicus (chub mackerel)
Pathway
sjo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    128381405 (tob1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sjo03019]
    128381405 (tob1b)
Messenger RNA biogenesis [BR:sjo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     128381405 (tob1b)
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     128381405 (tob1b)
SSDB
Motif
Pfam: BTG PAM2 SinI T2SSM
Other DBs
NCBI-GeneID: 128381405
NCBI-ProteinID: XP_053197389
LinkDB
Position
20:22961511..22964960
AA seq 338 aa
MQLEIQVALNFIISYLYNKLPRRRVNIFGEELERQLKRKYEGHWYPDKPYKGSGFRCIHV
GEKVDPVVEQAAKESGLDIEDVRNNLPQDLSVWIDPFEVSYQIGEKGPVKVLYVDDNNEN
GSELDKEIKNSFNPEAQVFMPISDPVGASSESSSPSPPFGQSAAVSPSFMPRSTQPLTFT
TATFAATKFGSTKMKSSGRGNNNSNGGGGSSSSSKVARTSPTNNLGLNVNTLLKQKAIST
SMHSLYGLGLGQQQQQKASALSPNAKEFVFPSLQGQASPGAVFPGEGSLGLGPLQYNNAF
DMFAAYGSLNDKSLMDGLNFSLSNMQYSNQQFQPVMAN
NT seq 1017 nt   +upstreamnt  +downstreamnt
atgcagcttgaaattcaagtagcactcaactttattatttcctatttatacaacaaactc
cctcgacgacgcgtgaatatcttcggtgaagagctcgagaggcagctgaagagaaaatat
gaaggccactggtacccagataagccatacaaaggttcagggttcagatgcatccatgta
ggggagaaggtggaccctgtggtggagcaggcagccaaagagagtgggctggacatcgaa
gacgtccggaataacctccctcaggaccttagtgtgtggatcgacccgtttgaggtttcc
taccagattggggagaagggaccggtcaaggtgctatatgtggatgataacaatgagaat
ggatccgagctggacaaagagatcaagaacagctttaatcccgaggcccaggtcttcatg
ccaatcagcgaccccgtcggggcatcctcagagtccagttccccctctcctcctttcggt
cagtccgctgcagtgagcccctccttcatgccacgctccacccagcccttaaccttcacc
actgccaccttcgctgccaccaaattcggctccactaagatgaagagcagcggccgtggc
aacaacaacagcaatggcggtggcggcagcagcagcagcagcaaggtggcccgcacctcc
cctaccaataacctgggcctgaatgtcaacaccctactgaagcagaaagccatctccacc
tccatgcactcactgtacgggctgggcttggggcagcagcagcagcagaaggcctctgct
ctctccccaaatgccaaggagtttgtgttccccagcctccagggccaggccagccctgga
gccgtgttccccggggagggctccctgggactcggccctctgcagtacaacaatgccttt
gacatgtttgcggcctacggaagcctcaacgacaagtcccttatggatggcctcaacttc
agtctgagcaacatgcagtattctaaccagcaattccagccagtcatggctaactaa

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